bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_2896_orf1
Length=165
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_064610 heterogeneous nuclear ribonucleoprotein A3, ... 168 9e-42
tpv:TP01_0879 hypothetical protein 143 3e-34
bbo:BBOV_IV008980 23.m05983; ribonucleoprotein; K14411 RNA-bin... 132 5e-31
ath:AT5G47620 heterogeneous nuclear ribonucleoprotein, putativ... 101 1e-21
ath:AT4G14300 heterogeneous nuclear ribonucleoprotein, putativ... 99.0 7e-21
tgo:TGME49_110050 RNA binding protein, putative ; K14411 RNA-b... 98.2 1e-20
xla:447602 MGC84815 protein 96.3 5e-20
ath:AT3G07810 heterogeneous nuclear ribonucleoprotein, putativ... 95.1 9e-20
xla:398218 dazap1; DAZ associated protein 1; K14411 RNA-bindin... 94.0 2e-19
ath:AT3G13224 RNA recognition motif (RRM)-containing protein 94.0 2e-19
dre:100002680 msi2a, MGC55422, cb746, fi47b09, msi2, wu:fb02d0... 92.8 4e-19
dre:394084 msi2b, MGC174035, MGC63812, msi2, zgc:174035, zgc:6... 92.8 5e-19
ath:AT5G40490 RNA recognition motif (RRM)-containing protein; ... 92.0 7e-19
mmu:76626 Msi2, 1700105C15Rik, AI451722, AI563628, AW489193, M... 91.7 9e-19
hsa:124540 MSI2, FLJ36569, MGC3245, MSI2H; musashi homolog 2 (... 91.7 1e-18
sce:YOL123W HRP1, NAB4, NAB5; Hrp1p; K14411 RNA-binding protei... 91.7 1e-18
dre:323529 fc01g05, wu:fc01g05; zgc:77366 91.7 1e-18
dre:334222 hnrnpa0, fi36h08, hnrpa0, wu:fa16d06, wu:fi36h08, z... 90.9 2e-18
ath:AT5G55550 RNA recognition motif (RRM)-containing protein; ... 90.9 2e-18
cpv:cgd5_700 musashi. RRM domain containing protein, splicing ... 89.7 4e-18
dre:541389 msi1, fb40b12, ms1, wu:fb40b12, zgc:103751; musashi... 89.4 5e-18
hsa:26528 DAZAP1, MGC19907; DAZ associated protein 1; K14411 R... 89.0 7e-18
mmu:70248 Dazap1, 2410042M16Rik, mPrrp; DAZ associated protein... 88.6 9e-18
ath:AT2G33410 heterogeneous nuclear ribonucleoprotein, putativ... 88.2 1e-17
cel:R10E9.1 msi-1; MuSashI (fly neural) family member (msi-1);... 87.8 1e-17
ath:AT4G26650 RNA recognition motif (RRM)-containing protein; ... 87.8 2e-17
xla:399260 msi2, Msi2h, musashi-2, musashi2, xrp1; musashi hom... 87.8 2e-17
xla:397764 MGC83311; nrp-1B; K14411 RNA-binding protein Musashi 87.0 2e-17
hsa:4440 MSI1; musashi homolog 1 (Drosophila); K14411 RNA-bind... 87.0 2e-17
xla:399271 msi1, MGC83965, Musashi, Musashi-1, Musashi1, msi1h... 86.7 3e-17
mmu:17690 Msi1, Msi1h, Musahi1, m-Msi-1; Musashi homolog 1(Dro... 86.7 4e-17
cel:F42A6.7 hrp-1; human HnRNP A1 homolog family member (hrp-1... 84.3 1e-16
hsa:10949 HNRNPA0, HNRPA0; heterogeneous nuclear ribonucleopro... 83.2 4e-16
xla:379158 hnrnpa2, MGC132139, MGC52881; heterogeneous nuclear... 82.0 7e-16
ath:AT1G17640 RNA recognition motif (RRM)-containing protein 81.6 1e-15
mmu:77134 Hnrnpa0, 1110055B05Rik, 3010025E17Rik, Hnrpa0; heter... 81.3 1e-15
hsa:9987 HNRPDL, HNRNP, JKTBP, JKTBP2, laAUF1; heterogeneous n... 80.9 2e-15
mmu:50926 Hnrpdl, AA407431, AA959857, D5Ertd650e, D5Wsu145e, J... 80.9 2e-15
dre:378453 hnrnpa1, hnrpa1; heterogeneous nuclear ribonucleopr... 80.5 2e-15
mmu:53379 Hnrnpa2b1, 9130414A06Rik, Hnrpa2, Hnrpa2b1, hnrnp-A;... 80.5 2e-15
mmu:100045191 heterogeneous nuclear ribonucleoproteins A2/B1-l... 80.5 2e-15
hsa:3181 HNRNPA2B1, DKFZp779B0244, FLJ22720, HNRNPA2, HNRNPB1,... 80.5 2e-15
dre:561459 dazap1; DAZ associated protein 1; K14411 RNA-bindin... 80.1 3e-15
mmu:11991 Hnrnpd, Auf1, C230004L04, Hnrpd; heterogeneous nucle... 79.3 5e-15
dre:406594 fd36h02, wu:fd36h02; zgc:77052 79.3 5e-15
dre:393467 MGC66127; zgc:66127; K12741 heterogeneous nuclear r... 79.3 6e-15
xla:380082 hnrnpa2b1, MGC53135, hnrnpa2, hnrnpb1, hnrpa2, hnrp... 79.0 6e-15
hsa:3184 HNRNPD, AUF1, AUF1A, HNRPD, P37, hnRNPD0; heterogeneo... 79.0 6e-15
cpv:cgd5_3270 RNA recognition motif (RRM)-containing protein 79.0 6e-15
dre:406701 hnrpdl, wu:fa11d08, zgc:66169; heterogeneous nuclea... 79.0 7e-15
> tgo:TGME49_064610 heterogeneous nuclear ribonucleoprotein A3,
putative ; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=430
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 111/143 (77%), Gaps = 6/143 (4%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQ-PRRERETTENSG 59
GRSRGFGF+TF + + V D HT+D +QVEVRRAIPREEAR++ P +R+ +G
Sbjct 161 GRSRGFGFITFTTPDPVARVADMRHTVDGTQVEVRRAIPREEARDHGGPGADRD----AG 216
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
R+F+GG+ DDV DE L+ +F +GE+ SA+VMVDR+ NRPRGFGF+I++NP+DAEKA+G
Sbjct 217 RLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGS 276
Query 120 HKDLGPNAEAKRAQPRSQTSRMR 142
HK LG + EAKRAQPR Q++R R
Sbjct 277 HKKLGVHCEAKRAQPR-QSNRDR 298
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++F+GGL T + L+ +F ++G++ + V+ D+ T R RGFGFI + P+ + +
Sbjct 124 KLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPVARVADM 183
Query 120 -HKDLGPNAEAKRAQPRSQT 138
H G E +RA PR +
Sbjct 184 RHTVDGTQVEVRRAIPREEA 203
> tpv:TP01_0879 hypothetical protein
Length=322
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
GRSRGFGFVTF E E++N V+ + HTID + +V+ A+ +E+A+ P+ ++ + R
Sbjct 94 GRSRGFGFVTFAERESVNTVLRKSHTIDGVEADVKLAVRKEKAKILAPQYDQ-----TKR 148
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GG+ + +T+ +++F+R+G + S + +VDR TNRPRG+GF+IY+N EDAEK++G+H
Sbjct 149 IFVGGVSEKITESYFRDYFARYGPIASYNYLVDRATNRPRGYGFVIYENMEDAEKSVGLH 208
Query 121 KDLGPNAEAKRAQPRS 136
LG N EAK AQP++
Sbjct 209 MSLGRNCEAKFAQPKN 224
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
E+ S ++F GGL T E LK +FS+FGE+T ++ D+ + R RGFGF+ + E
Sbjct 50 ESDYESLKIFAGGLTRSTTPEDLKAYFSKFGEVTHTEIVRDKNSGRSRGFGFVTFAERES 109
Query 113 AEKAL-GIHKDLGPNAEAKRA 132
L H G A+ K A
Sbjct 110 VNTVLRKSHTIDGVEADVKLA 130
> bbo:BBOV_IV008980 23.m05983; ribonucleoprotein; K14411 RNA-binding
protein Musashi
Length=306
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 93/140 (66%), Gaps = 5/140 (3%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
GRSRGFGFVTF + V+ H ID +V++AI +E AR+ P RE R
Sbjct 70 GRSRGFGFVTFSNDAALKAVLAVSHKIDNVLADVKQAIKKERARDLLPTREE-----VNR 124
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GG+ D+++++ K++F ++G + + + +VD+ TN+PRGFGF++Y++P D +KA+G H
Sbjct 125 IFVGGIADNISEDEFKDYFGKYGSVLNYNFIVDKSTNKPRGFGFVVYEDPADVDKAIGHH 184
Query 121 KDLGPNAEAKRAQPRSQTSR 140
LG N EAKRAQPR + +
Sbjct 185 TKLGRNCEAKRAQPRPSSGK 204
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
E+ + ++F GGL T E L+ +FS++G + + ++ D+ T R RGFGF+ + N
Sbjct 26 ESDYEAYKIFAGGLNRSTTAETLRNYFSKYGTVVHSEIVADKTTGRSRGFGFVTFSNDAA 85
Query 113 AEKALGI-HKDLGPNAEAKRA 132
+ L + HK A+ K+A
Sbjct 86 LKAVLAVSHKIDNVLADVKQA 106
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query 2 RSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEA-RNNQP 48
+ RGFGFV +E+ ++ + HHT E +RA PR + +N QP
Sbjct 162 KPRGFGFVVYEDPADVDKAIG-HHTKLGRNCEAKRAQPRPSSGKNMQP 208
> ath:AT5G47620 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=431
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEA----RNNQPRRERETTE 56
GR+RGFGFV F + VV H ID VE ++A+PR++ ++N +
Sbjct 44 GRARGFGFVVFADPNVAERVVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPS 103
Query 57 NSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKA 116
NS ++F+GGL VT+ K++F++FG +T VM D T RPRGFGFI Y + E +K
Sbjct 104 NSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKV 163
Query 117 L--GIHKDLGPNAEAKRAQPR 135
L H+ G E K A P+
Sbjct 164 LQKTFHELNGKMVEVKLAVPK 184
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query 58 SGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL 117
S ++FIGG+ + +++ L+++F FGE+ A +M DR T R RGFGF+++ +P AE+ +
Sbjct 5 SCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVV 64
Query 118 GI-HKDLGPNAEAKRAQPR 135
+ H G EAK+A PR
Sbjct 65 LLKHIIDGKIVEAKKAVPR 83
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query 2 RSRGFGFVTFEEMETINNVVDR-HHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
R RGFGF++++ E ++ V+ + H ++ VEV+ A+P++ A N R + + G
Sbjct 145 RPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDMALNTM--RNQMNVNSFGT 202
Query 61 VFIGGLGDDVTDEVLKEFFSRFG---ELTSASVMVDRETNRPRGFGFIIYKNPE 111
I L ++ T S +G E+ + + +R P G G+ I N E
Sbjct 203 SRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFE 256
> ath:AT4G14300 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=411
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 14/147 (9%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSG- 59
GR RGFGFV F + ++ V+ H+ID +V+V+RA+ REE + + T+ +SG
Sbjct 44 GRPRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGG 103
Query 60 -------RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++F+GGL +TDE +++F +G +T ++M D+ TNRPRGFGF+ + + ED
Sbjct 104 DAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDS-ED 162
Query 113 AEKALGIHK---DL-GPNAEAKRAQPR 135
A ++ +HK DL G E KRA P+
Sbjct 163 AVDSV-LHKTFHDLSGKQVEVKRALPK 188
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 43/61 (70%), Gaps = 0/61 (0%)
Query 57 NSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKA 116
+ G++F+GG+ + ++ L+E F+ +GE++ A VM D+ T RPRGFGF+I+ +P ++
Sbjct 4 DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63
Query 117 L 117
L
Sbjct 64 L 64
> tgo:TGME49_110050 RNA binding protein, putative ; K14411 RNA-binding
protein Musashi
Length=458
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 7/142 (4%)
Query 1 GRSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSG 59
G SRGFGFVTF + ++ + V H ID +V+VR A+P+ + N ++ +
Sbjct 133 GNSRGFGFVTFADASSVTSCVGAEKHVIDGQEVDVRNAVPKGQMVNKNADDDQHS----- 187
Query 60 RVFIGGLGDDVTDEVLKEFFS-RFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG 118
+VF+GG+ + +T+E L F S RFG + S+M D+ T R RGFGF+ ++ P A+ +G
Sbjct 188 KVFVGGIPETLTEERLSAFLSERFGSVKKVSLMHDKNTGRCRGFGFVTFQFPHSAQNCVG 247
Query 119 IHKDLGPNAEAKRAQPRSQTSR 140
H G E K+A+PR T++
Sbjct 248 KHDVDGHVIEVKKAEPRFATAK 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++F+G L T E L + +FG + VMVD+ T RGFGF+ + + +G
Sbjct 96 KIFVGNLNQQTTTETLSAYMKQFGAVEDVVVMVDKVTGNSRGFGFVTFADASSVTSCVGA 155
Query 120 HKDL--GPNAEAKRAQPRSQ 137
K + G + + A P+ Q
Sbjct 156 EKHVIDGQEVDVRNAVPKGQ 175
> xla:447602 MGC84815 protein
Length=291
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 10/144 (6%)
Query 2 RSRGFGFVTFEEMETINNV-VDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
+SRGFGFVTF+E +++ DR H +D V+ +RA+PREE E +
Sbjct 52 KSRGFGFVTFKEASSVDKAQADRPHKVDGKDVDSKRAMPREET-------SPEVHAAVKK 104
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI- 119
+F+GGL DVT+E L E+F +FG +T AS++V ++TN RGF F+ + + + +K +
Sbjct 105 IFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILAR 164
Query 120 -HKDLGPNAEAKRAQPRSQTSRMR 142
H G A+ ++A R + +++
Sbjct 165 PHMIGGHKADVRKALSREELRKVQ 188
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG- 118
++F+GGL ++ L+ ++S++GE+T VM D +N+ RGFGF+ +K +KA
Sbjct 14 KLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQAD 73
Query 119 -IHKDLGPNAEAKRAQPRSQTS 139
HK G + ++KRA PR +TS
Sbjct 74 RPHKVDGKDVDSKRAMPREETS 95
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query 3 SRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPREEARNNQPR 49
SRGF FVTF++ ++++ V+ R H I + +VR+A+ REE R Q +
Sbjct 143 SRGFAFVTFDDTDSVDKVILARPHMIGGHKADVRKALSREELRKVQTK 190
> ath:AT3G07810 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=494
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENS-- 58
GR+RGFGFV F + V+ H ID VE ++A+PR++ +N R + + S
Sbjct 44 GRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDD-QNMVNRSNSSSIQGSPG 102
Query 59 --GR---VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDA 113
GR +F+GGL VT+ K +F +FG T VM D T RPRGFGFI Y + E
Sbjct 103 GPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAV 162
Query 114 EKAL--GIHKDLGPNAEAKRAQPR 135
EK L H+ G E KRA P+
Sbjct 163 EKVLLKTFHELNGKMVEVKRAVPK 186
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query 56 ENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEK 115
++G++FIGG+ D +E LKE+FS FGE+ A ++ DR T R RGFGF+++ +P AE
Sbjct 3 SDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEI 62
Query 116 ALG-IHKDLGPNAEAKRAQPR 135
+ H G EAK+A PR
Sbjct 63 VITEKHNIDGRLVEAKKAVPR 83
> xla:398218 dazap1; DAZ associated protein 1; K14411 RNA-binding
protein Musashi
Length=360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 10/149 (6%)
Query 2 RSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPR----EEARNNQPRRERET-T 55
+SRGFGFV F++ + V+ R HT+D ++ + PR E +R + +++E T
Sbjct 49 QSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRT 108
Query 56 ENS--GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDA 113
ENS ++F+GG+ + + LKE+F+RFG +T ++ D E RPRGFGFI +++ +
Sbjct 109 ENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV 168
Query 114 EKALGI--HKDLGPNAEAKRAQPRSQTSR 140
++A+ + H +G E KRA+PR S+
Sbjct 169 DQAVNMHFHDIMGKKVEVKRAEPRDSKSQ 197
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query 59 GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG 118
G++F+GGL T E L+ +FS++GE+ +M D+ TN+ RGFGF+ +K+P L
Sbjct 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query 119 I--HKDLGPNAEAKRAQPR 135
H G N + K PR
Sbjct 70 SRPHTLDGRNIDPKPCTPR 88
> ath:AT3G13224 RNA recognition motif (RRM)-containing protein
Length=358
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 9/143 (6%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
G+ RGFGF+TF + ++ V++ H I+ QVE++R IP+ A NQ + + +
Sbjct 57 GQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKG-AGGNQSKDIKTK-----K 110
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+F+GG+ VT++ LK+FF+++G + V+ D ETNR RGFGF+I+ + E ++ L G
Sbjct 111 IFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKG 170
Query 119 IHKDLG-PNAEAKRAQPRSQTSR 140
D+ E K+A+P+ +R
Sbjct 171 NMIDMADTQVEIKKAEPKKSLNR 193
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query 59 GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL- 117
G++FIGGL D T+ V + F ++GE+T + +M DR T +PRGFGFI + +P +K +
Sbjct 19 GKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIE 78
Query 118 GIHKDLGPNAEAKRAQPR------SQTSRMRMFGMGGMP 150
H G E KR P+ S+ + + +GG+P
Sbjct 79 DTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIP 117
> dre:100002680 msi2a, MGC55422, cb746, fi47b09, msi2, wu:fb02d08,
wu:fi32d12, wu:fi47b09; musashi homolog 2a (Drosophila);
K14411 RNA-binding protein Musashi
Length=388
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 80/137 (58%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDR-HHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGF+TF ++ +++ V+ + HH +D ++ + A PR R + + + +
Sbjct 60 RSRGFGFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 111
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL E +K++F +FG++ A +M D+ TNR RGFGF+ ++N + EK IH
Sbjct 112 IFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCEIH 171
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 172 FHEINNKMVECKKAQPK 188
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + G++FIGGL + + L+++F +FGE+ VM D T R RGFGFI + +
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSS 74
Query 113 AEKALG-IHKDLGPN------AEAKRAQPRSQTSRMRMFGMGGM 149
+K L H +L A +RAQP+ T ++F +GG+
Sbjct 75 VDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 117
> dre:394084 msi2b, MGC174035, MGC63812, msi2, zgc:174035, zgc:63812;
musashi homolog 2b (Drosophila); K14411 RNA-binding
protein Musashi
Length=408
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDR-HHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + +++ V+ + HH +D ++ + A PR R + + + +
Sbjct 60 RSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 111
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + E +K++F +FG++ A +M D+ TNR RGFGF+ ++N + EK IH
Sbjct 112 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIH 171
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 172 FHEINNKMVECKKAQPK 188
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + G++FIGGL + + L+++FS+FGE+ VM D T R RGFGF+ + +
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAAS 74
Query 113 AEKALG-IHKDLGPN------AEAKRAQPRSQTSRMRMFGMGGM 149
+K L H +L A +RAQP+ T ++F +GG+
Sbjct 75 VDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 117
> ath:AT5G40490 RNA recognition motif (RRM)-containing protein;
K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=423
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 14/151 (9%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
G+ RGFGFVT+ + ++ V+ +H I QVE++R IPR +N + ++
Sbjct 80 GQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKK-------- 131
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GG+ V D+ KEFF +FGEL +M D T R RGFGF+ Y++ + + L
Sbjct 132 IFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKG 191
Query 121 KDL---GPNAEAKRAQPR---SQTSRMRMFG 145
+ G E K+A+P+ S T+ + FG
Sbjct 192 NRIELSGTQVEIKKAEPKKPNSVTTPSKRFG 222
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query 33 EVRRAIPREEARNNQPRRERET---TENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSAS 89
E+ P E+ ++ + + + +++G++F+GGL + T + F ++GE+T +
Sbjct 13 EIHDPKPSEDIEDDDDKSQPHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSV 72
Query 90 VMVDRETNRPRGFGFIIYKNPEDAEKAL-GIHKDLGPNAEAKRAQPRSQTS----RMRMF 144
+M DR+T +PRGFGF+ Y + +K + H +G E KR PR S + +
Sbjct 73 IMKDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKI 132
Query 145 GMGGMPMA 152
+GG+P +
Sbjct 133 FVGGIPSS 140
> mmu:76626 Msi2, 1700105C15Rik, AI451722, AI563628, AW489193,
MGC118040, MGC130496, Msi2h; Musashi homolog 2 (Drosophila);
K14411 RNA-binding protein Musashi
Length=346
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDR-HHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + +++ V+ + HH +D ++ + A PR R + + + +
Sbjct 60 RSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 111
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + E +K++F +FG++ A +M D+ TNR RGFGF+ ++N + EK IH
Sbjct 112 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIH 171
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 172 FHEINNKMVECKKAQPK 188
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + G++FIGGL + + L+++FS+FGE+ VM D T R RGFGF+ + +P
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPAS 74
Query 113 AEKALG-IHKDLGPN------AEAKRAQPRSQTSRMRMFGMGGM 149
+K LG H +L A +RAQP+ T ++F +GG+
Sbjct 75 VDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 117
> hsa:124540 MSI2, FLJ36569, MGC3245, MSI2H; musashi homolog 2
(Drosophila); K14411 RNA-binding protein Musashi
Length=328
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDR-HHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + +++ V+ + HH +D ++ + A PR R + + + +
Sbjct 60 RSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 111
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + E +K++F +FG++ A +M D+ TNR RGFGF+ ++N + EK IH
Sbjct 112 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIH 171
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 172 FHEINNKMVECKKAQPK 188
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + G++FIGGL + + L+++FS+FGE+ VM D T R RGFGF+ + +P
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPAS 74
Query 113 AEKALG-IHKDLGPN------AEAKRAQPRSQTSRMRMFGMGGM 149
+K LG H +L A +RAQP+ T ++F +GG+
Sbjct 75 VDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 117
> sce:YOL123W HRP1, NAB4, NAB5; Hrp1p; K14411 RNA-binding protein
Musashi
Length=534
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 84/144 (58%), Gaps = 18/144 (12%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
GRSRGFGF++FE+ +++ VV H +D ++ +RAIPR+E + +G+
Sbjct 197 GRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDE------------QDKTGK 244
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GG+G DV + +EFFS++G + A +M+D++T + RGFGF+ Y + + ++
Sbjct 245 IFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNK 304
Query 121 ----KDLGPNAEAKRAQPRSQTSR 140
KD E KRA+PR +
Sbjct 305 FIDFKD--RKIEIKRAEPRHMQQK 326
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query 44 RNNQPRRERETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFG 103
+ + R + + ++ S ++FIGGL D T++ L+E+F ++G +T +M D T R RGFG
Sbjct 144 QTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFG 203
Query 104 FIIYKNPEDAEKALGIHKDL-GPNAEAKRAQPRSQTSRMRMFGMGGM 149
F+ ++ P ++ + L G + KRA PR + + +GG+
Sbjct 204 FLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQDKTGKIFVGGI 250
> dre:323529 fc01g05, wu:fc01g05; zgc:77366
Length=305
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 9/139 (6%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSR FGFVT+ + ++ + R H +D + VE++RA+ RE+A +P E +
Sbjct 49 RSRCFGFVTYSSPDEADSAMSARPHILDGNNVELKRAVAREDA--GKP----EALAKVKK 102
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKA--LG 118
+FIGGL DD+ ++ L++ FS+FG + A V+ D+ET + RGFGF+ +++ + A+KA L
Sbjct 103 IFIGGLKDDIEEDHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLK 162
Query 119 IHKDLGPNAEAKRAQPRSQ 137
H G E K+A + +
Sbjct 163 FHMINGHKVEVKKALTKQE 181
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++F+GGL TD+ L+ F ++G+LT V+ +++ R R FGF+ Y +P++A+ A+
Sbjct 11 KLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADSAMSA 70
Query 120 --HKDLGPNAEAKRAQPRSQTSR 140
H G N E KRA R +
Sbjct 71 RPHILDGNNVELKRAVAREDAGK 93
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query 1 GRSRGFGFVTFEEMETINN-VVDRHHTIDESQVEVRRAIPREEAR 44
G+ RGFGFV FE+ ++ + VV + H I+ +VEV++A+ ++E +
Sbjct 139 GKKRGFGFVYFEDNDSADKAVVLKFHMINGHKVEVKKALTKQEMQ 183
> dre:334222 hnrnpa0, fi36h08, hnrpa0, wu:fa16d06, wu:fi36h08,
zgc:77280; heterogeneous nuclear ribonucleoprotein A0; K12894
heterogeneous nuclear ribonucleoprotein A0
Length=314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 9/139 (6%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSR FGFVT+ E + + R H +D VEV+RA+ RE+A +P E +
Sbjct 47 RSRCFGFVTYSTSEEADAAMAARPHVVDGKNVEVKRAVAREDA--GRP----EALAKVKK 100
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKA--LG 118
+F+GGL DD+ ++ L EFFS+FG + + V+ D++T + RGFGF+ +++ + A+KA L
Sbjct 101 IFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLK 160
Query 119 IHKDLGPNAEAKRAQPRSQ 137
H G E K+A + +
Sbjct 161 FHMINGHKVEVKKALTKQE 179
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query 56 ENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEK 115
E ++F+GGL T++ L+ +F +FG LT V+ + + R R FGF+ Y E+A+
Sbjct 5 EKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEADA 64
Query 116 ALGI--HKDLGPNAEAKRAQPRSQTSR 140
A+ H G N E KRA R R
Sbjct 65 AMAARPHVVDGKNVEVKRAVAREDAGR 91
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query 1 GRSRGFGFVTFEEMETINN-VVDRHHTIDESQVEVRRAIPREEAR 44
G+ RGFGFV FE+ ++ + VV + H I+ +VEV++A+ ++E +
Sbjct 137 GKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKALTKQEIQ 181
> ath:AT5G55550 RNA recognition motif (RRM)-containing protein;
K14411 RNA-binding protein Musashi
Length=460
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREE----ARNNQPRRERETTE 56
GR+RGFGF+ F + V+ H ID VE ++A+PR++ R+ P
Sbjct 44 GRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVH 103
Query 57 NSG----RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
G ++F+GGL +T+E K +F +FG + VM D T RPRGFGFI + + +
Sbjct 104 GGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDA 163
Query 113 AEKAL--GIHKDLGPNAEAKRAQPR--SQTSRMRMFGMGGMPMAGG 154
++ L H+ G E KRA P+ S S +R G+ GG
Sbjct 164 VDRVLHKTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGG 209
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query 59 GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKA-L 117
G++FIGG+ D +E L+++FS +G++ A +M DR T R RGFGFI++ +P +E+ +
Sbjct 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query 118 GIHKDLGPNAEAKRAQPRSQTSRMR 142
H G EAK+A PR ++
Sbjct 66 DKHIIDGRTVEAKKAVPRDDQQVLK 90
> cpv:cgd5_700 musashi. RRM domain containing protein, splicing
related
Length=507
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 50/185 (27%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTE---- 56
GRSRGFGF+TF E+++ V+ +D +++ +RA+PR + N+ ++
Sbjct 61 GRSRGFGFITFASEESVDAVLSSPQIVDGKEIDCKRAVPRGVIQANEADESADSNNQASN 120
Query 57 --------------NSG-----------------------------RVFIGGLGDDVTDE 73
NSG ++F+GGL TDE
Sbjct 121 NSGNTNANNANISGNSGSNTANSNSNVTGRSHIGGAGGSSGGFSATKIFVGGLPQSCTDE 180
Query 74 VLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIHKDLGPN---AEAK 130
L+E F ++G + + SVMVDR+TNR RGFGF+ Y++P+ E+ + + D + E K
Sbjct 181 KLREHFGKYGTIKNLSVMVDRDTNRHRGFGFVEYESPDAVEEVMRHYYDHQIDNKWVECK 240
Query 131 RAQPR 135
+A PR
Sbjct 241 KALPR 245
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++F GGL D T+ L+ FS +GE+ + V+ ++ T R RGFGFI + + E + L
Sbjct 24 KIFCGGLSDVTTNASLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEESVDAVLSS 83
Query 120 HKDL-GPNAEAKRAQPR 135
+ + G + KRA PR
Sbjct 84 PQIVDGKEIDCKRAVPR 100
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query 2 RSRGFGFVTFEEMETINNVVDRH---HTIDESQVEVRRAIPRE 41
R RGFGFV +E + + V+ RH H ID VE ++A+PRE
Sbjct 205 RHRGFGFVEYESPDAVEEVM-RHYYDHQIDNKWVECKKALPRE 246
> dre:541389 msi1, fb40b12, ms1, wu:fb40b12, zgc:103751; musashi
homolog 1 (Drosophila); K14411 RNA-binding protein Musashi
Length=330
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDR-HHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + ++ V+ + H +D ++ + A PR R + + + +
Sbjct 59 RSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPR--------RAQPKLVTRTKK 110
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + T E +K++F +FG++ A +M D+ TNR RGFGF+ ++N + EK IH
Sbjct 111 IFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIH 170
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 171 FHEINNKMVECKKAQPK 187
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++FIGGL T E LK++F +FGE+ + VM D T R RGFGF+ + + +K L
Sbjct 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query 120 ------HKDLGPN-AEAKRAQPRSQTSRMRMFGMGGM 149
K + P A +RAQP+ T ++F +GG+
Sbjct 81 TRHELDSKTIDPKVAFPRRAQPKLVTRTKKIF-VGGL 116
> hsa:26528 DAZAP1, MGC19907; DAZ associated protein 1; K14411
RNA-binding protein Musashi
Length=407
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query 2 RSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPR----EEARNNQPRRERETTE 56
+SRGFGFV F++ + V+ R HT+D ++ + PR E R + ++ ++
Sbjct 49 QSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSD 108
Query 57 NS--GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAE 114
NS ++F+GG+ + + L+E+F +FG +T ++ D E RPRGFGFI +++ + +
Sbjct 109 NSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVD 168
Query 115 KALGI--HKDLGPNAEAKRAQPRSQTSR 140
+A+ + H +G E KRA+PR S+
Sbjct 169 QAVNMHFHDIMGKKVEVKRAEPRDSKSQ 196
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query 59 GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG 118
G++F+GGL T E L+ +FS++GE+ +M D+ TN+ RGFGF+ +K+P L
Sbjct 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query 119 --IHKDLGPNAEAKRAQPRS-QTSRMR 142
H G N + K PR Q R R
Sbjct 70 SRPHTLDGRNIDPKPCTPRGMQPERTR 96
> mmu:70248 Dazap1, 2410042M16Rik, mPrrp; DAZ associated protein
1; K14411 RNA-binding protein Musashi
Length=406
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query 2 RSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPR------EEARNNQPRRERET 54
+SRGFGFV F++ + V+ R HT+D ++ + PR + + R
Sbjct 49 QSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSD 108
Query 55 TENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAE 114
+ S ++F+GG+ + + L+E+F +FG +T ++ D E RPRGFGFI +++ + +
Sbjct 109 SSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVD 168
Query 115 KALGI--HKDLGPNAEAKRAQPR 135
+A+ + H +G E KRA+PR
Sbjct 169 QAVNMHFHDIMGKKVEVKRAEPR 191
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query 59 GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG 118
G++F+GGL T E L+ +FS++GE+ +M D+ TN+ RGFGF+ +K+P L
Sbjct 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query 119 --IHKDLGPNAEAKRAQPRS-QTSRMR 142
H G N + K PR Q R R
Sbjct 70 SRPHTLDGRNIDPKPCTPRGMQPERTR 96
> ath:AT2G33410 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=404
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 22/151 (14%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
GR RGFGFV F + I+ V+ H ID V+V+RA+ REE Q R T N+ R
Sbjct 44 GRPRGFGFVAFSDPAVIDRVLQDKHHIDNRDVDVKRAMSREE----QSPAGRSGTFNASR 99
Query 61 ------------VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYK 108
+F+GGL +T + + +F +G ++ A +M+D+ T RPRGFGF+ +
Sbjct 100 NFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFD 159
Query 109 NPEDAEKALGIHK---DL-GPNAEAKRAQPR 135
+ + + L +HK DL G E KRA P+
Sbjct 160 SEDSVD--LVLHKTFHDLNGKQVEVKRALPK 188
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query 56 ENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEK 115
+ G++FIGG+ D + +L+E+FS FGE+ +VM ++ T RPRGFGF+ + +P ++
Sbjct 3 SDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDR 62
Query 116 AL-GIHKDLGPNAEAKRAQPRSQTS 139
L H + + KRA R + S
Sbjct 63 VLQDKHHIDNRDVDVKRAMSREEQS 87
> cel:R10E9.1 msi-1; MuSashI (fly neural) family member (msi-1);
K14411 RNA-binding protein Musashi
Length=320
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
R+RGFGF+TF + +++ V++ R H +D +++ + A P+ R + + + +
Sbjct 84 RARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK--------RTQAKLVTKTKK 135
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI- 119
VFIGGL T E +K++F +G++ A +M D+ T R RGFGF+ + + E A+K I
Sbjct 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIH 195
Query 120 -HKDLGPNAEAKRAQPR 135
H+ G E K+AQP+
Sbjct 196 FHEINGKMVECKKAQPK 212
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query 40 REEARNNQPRRE-RETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNR 98
EEAR N + +++ G++FIGGL T E L+++F RFGE+ VM D T R
Sbjct 25 HEEARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKR 84
Query 99 PRGFGFIIYKNPEDAEKALGIH------KDLGPN-AEAKRAQPRSQTSRMRMFGMGGM 149
RGFGFI + +P +K L K + P A KR Q + T ++F +GG+
Sbjct 85 ARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVF-IGGL 141
> ath:AT4G26650 RNA recognition motif (RRM)-containing protein;
K14411 RNA-binding protein Musashi
Length=452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREE----ARNNQPRRERETTE 56
GR+RGFGF+ F + V+ H ID VE ++A+PR++ R+ P +
Sbjct 50 GRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSH 109
Query 57 --NSG-----RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKN 109
N G ++F+GGL +T+ K +F +FG + VM D T RPRGFGFI + +
Sbjct 110 GGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDS 169
Query 110 PEDAEKAL--GIHKDLGPNAEAKRAQPRSQTS 139
E + L H+ G E KRA P+ +S
Sbjct 170 EESVDMVLHKTFHELNGKMVEVKRAVPKELSS 201
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query 50 RERETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKN 109
++ E+ + G++FIGG+ D +E L+E+F ++G+L A +M DR T R RGFGFI++ +
Sbjct 3 QKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFAD 62
Query 110 PEDAEKA-LGIHKDLGPNAEAKRAQPR 135
P AE+ + H G EAK+A PR
Sbjct 63 PSVAERVIMDKHIIDGRTVEAKKAVPR 89
> xla:399260 msi2, Msi2h, musashi-2, musashi2, xrp1; musashi homolog
2; K14411 RNA-binding protein Musashi
Length=406
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDR-HHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + +++ V+ + HH +D ++ + A PR R + + + +
Sbjct 60 RSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 111
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + E +K++F ++G++ A +M D+ TNR RGFGF+ ++ + EK IH
Sbjct 112 IFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIH 171
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 172 FHEINNKMVECKKAQPK 188
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + G++FIGGL + + L+++F++FGE+ VM D T R RGFGF+ + +P
Sbjct 15 DSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPAS 74
Query 113 AEKALG-IHKDLGPN------AEAKRAQPRSQTSRMRMFGMGGM 149
+K L H +L A +RAQP+ T ++F +GG+
Sbjct 75 VDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 117
> xla:397764 MGC83311; nrp-1B; K14411 RNA-binding protein Musashi
Length=340
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 11/141 (7%)
Query 2 RSRGFGFVTFEEMETINNVVDRH-HTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + ++ V+ + H +D ++ + A PR R + + + +
Sbjct 59 RSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 110
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + T E +K++F +FG++ A +M D+ TNR RGFGF+ ++ + EK IH
Sbjct 111 IFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCDIH 170
Query 121 KDLGPN--AEAKRAQPRSQTS 139
N E K+AQP+ S
Sbjct 171 FHEINNKMVECKKAQPKEVMS 191
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + ++FIGGL T E L+E+FS FG++ VM D T R RGFGF+ + +
Sbjct 14 DSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAG 73
Query 113 AEKALGI------HKDLGPN-AEAKRAQPRSQTSRMRMFGMGGM 149
+K L K + P A +RAQP+ T ++F +GG+
Sbjct 74 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 116
> hsa:4440 MSI1; musashi homolog 1 (Drosophila); K14411 RNA-binding
protein Musashi
Length=362
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDRH-HTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + ++ V+ + H +D ++ + A PR R + + + +
Sbjct 59 RSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 110
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + T E +K++F +FG++ A +M D+ TNR RGFGF+ +++ + EK IH
Sbjct 111 IFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIH 170
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 171 FHEINNKMVECKKAQPK 187
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + ++FIGGL T E L+E+F +FGE+ VM D T R RGFGF+ + +
Sbjct 14 DSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAG 73
Query 113 AEKALGI------HKDLGPN-AEAKRAQPRSQTSRMRMFGMGGM 149
+K L K + P A +RAQP+ T ++F +GG+
Sbjct 74 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 116
> xla:399271 msi1, MGC83965, Musashi, Musashi-1, Musashi1, msi1h;
musashi homolog 1; K14411 RNA-binding protein Musashi
Length=347
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDRH-HTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + ++ V+ + H +D ++ + A PR R + + + +
Sbjct 59 RSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 110
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + T E +K++F +FG++ A +M D+ TNR RGFGF+ ++ + EK IH
Sbjct 111 IFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIH 170
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 171 FHEINNKMVECKKAQPK 187
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + ++FIGGL T E L+E+FS FG++ VM D T R RGFGF+ + +
Sbjct 14 DSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAG 73
Query 113 AEKALGI------HKDLGPN-AEAKRAQPRSQTSRMRMFGMGGM 149
+K L K + P A +RAQP+ T ++F +GG+
Sbjct 74 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 116
> mmu:17690 Msi1, Msi1h, Musahi1, m-Msi-1; Musashi homolog 1(Drosophila);
K14411 RNA-binding protein Musashi
Length=362
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 11/137 (8%)
Query 2 RSRGFGFVTFEEMETINNVVDRH-HTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + ++ V+ + H +D ++ + A PR R + + + +
Sbjct 59 RSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPR--------RAQPKMVTRTKK 110
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGIH 120
+F+GGL + T E +K +F +FG++ A +M D+ TNR RGFGF+ +++ + EK IH
Sbjct 111 IFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIH 170
Query 121 KDLGPN--AEAKRAQPR 135
N E K+AQP+
Sbjct 171 FHEINNKMVECKKAQPK 187
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query 53 ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPED 112
++ + ++FIGGL T E L+E+F +FGE+ VM D T R RGFGF+ + +
Sbjct 14 DSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAG 73
Query 113 AEKALGI------HKDLGPN-AEAKRAQPRSQTSRMRMFGMGGM 149
+K L K + P A +RAQP+ T ++F +GG+
Sbjct 74 VDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIF-VGGL 116
> cel:F42A6.7 hrp-1; human HnRNP A1 homolog family member (hrp-1);
K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=346
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 86/145 (59%), Gaps = 9/145 (6%)
Query 2 RSRGFGFVTFE-EMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF + E + R H ID V+ +RA+PR++ + E+ ++ R
Sbjct 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDD------KNRSESNVSTKR 115
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+++ G+ +D T+++L E+F+++G +T + +++D+ T +PRGFGF+ + + + ++ +
Sbjct 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query 119 IHKDLGPNAEAKRAQPRSQTSRMRM 143
H G + ++ + + S+ +M
Sbjct 176 SHMVNGHRCDVRKGLSKDEMSKAQM 200
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query 56 ENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEK 115
EN ++F+GGL + TD++++EF+S+FGE+T VM D T R RGFGF+ + + +
Sbjct 20 ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDA 79
Query 116 ALGI--HKDLGPNAEAKRAQPRSQTSR 140
A+ H G + KRA PR +R
Sbjct 80 AMKQRPHIIDGKTVDPKRAVPRDDKNR 106
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query 2 RSRGFGFVTFEEMETINN-VVDRHHTIDESQVEVRRAIPREEARNNQPRRERETT 55
+ RGFGFVTF++ ++++ V+ + H ++ + +VR+ + ++E Q R+RET
Sbjct 153 KPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETR 207
> hsa:10949 HNRNPA0, HNRPA0; heterogeneous nuclear ribonucleoprotein
A0; K12894 heterogeneous nuclear ribonucleoprotein A0
Length=305
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 9/137 (6%)
Query 2 RSRGFGFVTFEEMETINNVVDRH-HTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSR FGFVT+ +E + + H +D + VE++RA+ RE++ +P + +
Sbjct 46 RSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSA--RPGAHAKVK----K 99
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKA--LG 118
+F+GGL DV + L E FS+FG + A ++ D+++ + RGFGF+ ++N + A+KA +
Sbjct 100 LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Query 119 IHKDLGPNAEAKRAQPR 135
H G E K+A P+
Sbjct 160 FHPIQGHRVEVKKAVPK 176
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query 56 ENS--GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDA 113
ENS ++FIGGL ++ L+ F FG LT V+V+ +T R R FGF+ Y N E+A
Sbjct 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query 114 EKALGI--HKDLGPNAEAKRAQPRSQTSR 140
+ A+ H G E KRA R ++R
Sbjct 62 DAAMAASPHAVDGNTVELKRAVSREDSAR 90
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query 1 GRSRGFGFVTFEEMETINN-VVDRHHTIDESQVEVRRAIPREE 42
G+ RGFGFV F+ + + V + H I +VEV++A+P+E+
Sbjct 136 GKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
> xla:379158 hnrnpa2, MGC132139, MGC52881; heterogeneous nuclear
ribonucleoprotein A2 homolog 2
Length=358
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF M ++ + R HTID VE +RA+ REE+ +P +
Sbjct 48 RSRGFGFVTFSCMNEVDAAMSARPHTIDGRVVEPKRAVAREESA--KPGAHVTVK----K 101
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+F+GG+ +D + L+E+F +G++ S ++ D+++ + RGFGF+ + + + +K +
Sbjct 102 LFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQK 161
Query 119 IHKDLGPNAEAKRAQPRSQ 137
H G NAE ++A + +
Sbjct 162 YHTINGHNAEVRKALSKQE 180
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYK--NPEDAEKAL 117
++FIGGL + T+E L+ F+ ++G+LT VM D + R RGFGF+ + N DA +
Sbjct 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69
Query 118 GIHKDLGPNAEAKRAQPRSQTSR 140
H G E KRA R ++++
Sbjct 70 RPHTIDGRVVEPKRAVAREESAK 92
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query 1 GRSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPREEARNNQPRR 50
G+ RGFGFVTF + + ++ +V ++HTI+ EVR+A+ ++E ++ Q R
Sbjct 138 GKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQEMQDVQNTR 188
> ath:AT1G17640 RNA recognition motif (RRM)-containing protein
Length=369
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query 1 GRSRGFGFVTFEEMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
G RGFGFVTF + V++ H ID+ +V+++R +PR + + + + +
Sbjct 104 GNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPRGDKDT-----DIKAVSKTRK 158
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG-- 118
+F+GGL + ++ LK +F +G++ +M D T R RGFGF+ ++ + ++
Sbjct 159 IFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDG 218
Query 119 -IHKDLGPNAEAKRAQPR--SQTSRMRMFGMGG 148
+H+ E KRA+P+ + + R +G G
Sbjct 219 KVHELGDKQVEIKRAEPKRTGRDNSFRSYGASG 251
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query 13 EMETINNVVDRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGRVFIGGLGDDVTD 72
E+ET ++ + +D ++++ ++ R + + G++F+GG+ + T
Sbjct 28 EVETFDDRRNGGAAVDTGGIQMKHSVDH--------RHSSSSMSSPGKLFVGGVSWETTA 79
Query 73 EVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL-GIHKDLGPNAEAKR 131
E +F +FGE+ + +M DR T PRGFGF+ + + AEK L H + KR
Sbjct 80 ETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKR 139
Query 132 AQPRSQ-------TSRMRMFGMGGMP 150
PR S+ R +GG+P
Sbjct 140 TLPRGDKDTDIKAVSKTRKIFVGGLP 165
> mmu:77134 Hnrnpa0, 1110055B05Rik, 3010025E17Rik, Hnrpa0; heterogeneous
nuclear ribonucleoprotein A0; K12894 heterogeneous
nuclear ribonucleoprotein A0
Length=305
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 80/137 (58%), Gaps = 9/137 (6%)
Query 2 RSRGFGFVTFEEMETINNVVDRH-HTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSR FGFVT+ +E + + H +D + VE++RA+ RE++ +P + +
Sbjct 46 RSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSA--RPGAHAKVK----K 99
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKA--LG 118
+F+GGL DV + L E FS+FG + A ++ D+++ + RGFGF+ +++ + A+KA +
Sbjct 100 LFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVK 159
Query 119 IHKDLGPNAEAKRAQPR 135
H G E K+A P+
Sbjct 160 FHPIQGHRVEVKKAVPK 176
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query 56 ENS--GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDA 113
ENS ++FIGGL ++ L+ F FG LT V+V+ +T R R FGF+ Y N E+A
Sbjct 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query 114 EKALGI--HKDLGPNAEAKRAQPRSQTSR 140
+ A+ H G E KRA R ++R
Sbjct 62 DAAMAASPHAVDGNTVELKRAVSREDSAR 90
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query 1 GRSRGFGFVTFEEMETINN-VVDRHHTIDESQVEVRRAIPREE 42
G+ RGFGFV F+ + + V + H I +VEV++A+P+E+
Sbjct 136 GKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
> hsa:9987 HNRPDL, HNRNP, JKTBP, JKTBP2, laAUF1; heterogeneous
nuclear ribonucleoprotein D-like; K13044 heterogeneous nuclear
ribonucleoprotein A/B/D
Length=420
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query 1 GRSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSG 59
GRSRGFGFV F++ +++ V++ + H +D ++ +RA + + E
Sbjct 186 GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA------------KALKGKEPPK 233
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG- 118
+VF+GGL D ++E +KE+F FGE+ + + +D +TN RGF FI Y + E +K L
Sbjct 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 293
Query 119 -IHKDLGPNAEAKRAQPR 135
H+ E K AQP+
Sbjct 294 RYHQIGSGKCEIKVAQPK 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query 56 ENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEK 115
++ G++FIGGL D + + L E+ SRFGE+ ++ D T R RGFGF+++K+ +K
Sbjct 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query 116 ALGI--HKDLGPNAEAKRAQ 133
L + HK G + KRA+
Sbjct 205 VLELKEHKLDGKLIDPKRAK 224
> mmu:50926 Hnrpdl, AA407431, AA959857, D5Ertd650e, D5Wsu145e,
JKTBP, hnRNP_DL, hnRNP-DL; heterogeneous nuclear ribonucleoprotein
D-like; K13044 heterogeneous nuclear ribonucleoprotein
A/B/D
Length=420
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query 1 GRSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSG 59
GRSRGFGFV F++ +++ V++ + H +D ++ +RA + + E
Sbjct 186 GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA------------KALKGKEPPK 233
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG- 118
+VF+GGL D ++E +KE+F FGE+ + + +D +TN RGF FI Y + E +K L
Sbjct 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 293
Query 119 -IHKDLGPNAEAKRAQPR 135
H+ E K AQP+
Sbjct 294 RYHQIGSGKCEIKVAQPK 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query 56 ENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEK 115
++ G++FIGGL D + + L E+ SRFGE+ ++ D T R RGFGF+++K+ +K
Sbjct 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query 116 ALGI--HKDLGPNAEAKRAQ 133
L + HK G + KRA+
Sbjct 205 VLELKEHKLDGKLIDPKRAK 224
> dre:378453 hnrnpa1, hnrpa1; heterogeneous nuclear ribonucleoprotein
A1; K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=422
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 9/141 (6%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVT+ ++ +N +D R H +D VE +RA+ RE++ ++P +
Sbjct 72 RSRGFGFVTYSSVDEVNASMDARPHKVDGRLVEPKRAVSREDS--SKPFAHTTVK----K 125
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+F+GG+ DD + L+++F +FG++ +MVD +T RGF F+ + + + ++ +
Sbjct 126 IFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQK 185
Query 119 IHKDLGPNAEAKRAQPRSQTS 139
H G N E ++A + + +
Sbjct 186 YHTVNGHNCEVRKALSKQEMA 206
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query 43 ARNNQPRRERETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGF 102
++ QPR E ++FIGGL + TD+ L+ F ++G LT VM D T R RGF
Sbjct 21 SKEGQPRE----PEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGF 76
Query 103 GFIIYKNPEDAEKALGI--HKDLGPNAEAKRAQPRSQTSR 140
GF+ Y + ++ ++ HK G E KRA R +S+
Sbjct 77 GFVTYSSVDEVNASMDARPHKVDGRLVEPKRAVSREDSSK 116
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query 1 GRSRGFGFVTFEEMETINN-VVDRHHTIDESQVEVRRAIPREEARN 45
G RGF FVTF++ ++++ V+ ++HT++ EVR+A+ ++E N
Sbjct 162 GNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKALSKQEMAN 207
> mmu:53379 Hnrnpa2b1, 9130414A06Rik, Hnrpa2, Hnrpa2b1, hnrnp-A;
heterogeneous nuclear ribonucleoprotein A2/B1
Length=341
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF M ++ + R H+ID VE +RA+ REE+ +P +
Sbjct 48 RSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREES--GKPGAHVTVK----K 101
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+F+GG+ +D + L+++F +G++ + ++ DR++ + RGFGF+ + + + +K +
Sbjct 102 LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Query 119 IHKDLGPNAEAKRAQPRSQ 137
H G NAE ++A R +
Sbjct 162 YHTINGHNAEVRKALSRQE 180
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++FIGGL + T+E L+ ++ ++G+LT VM D + R RGFGF+ + + + + A+
Sbjct 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69
Query 120 --HKDLGPNAEAKRAQPRSQTSR 140
H G E KRA R ++ +
Sbjct 70 RPHSIDGRVVEPKRAVAREESGK 92
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query 1 GRSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPREEARNNQPRR 50
G+ RGFGFVTF++ + ++ +V ++HTI+ EVR+A+ R+E + Q R
Sbjct 138 GKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSR 188
> mmu:100045191 heterogeneous nuclear ribonucleoproteins A2/B1-like;
K13158 heterogeneous nuclear ribonucleoprotein A2/B1
Length=341
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF M ++ + R H+ID VE +RA+ REE+ +P +
Sbjct 48 RSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREES--GKPGAHVTVK----K 101
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+F+GG+ +D + L+++F +G++ + ++ DR++ + RGFGF+ + + + +K +
Sbjct 102 LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Query 119 IHKDLGPNAEAKRAQPRSQ 137
H G NAE ++A R +
Sbjct 162 YHTINGHNAEVRKALSRQE 180
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++FIGGL + T+E L+ ++ ++G+LT VM D + R RGFGF+ + + + + A+
Sbjct 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69
Query 120 --HKDLGPNAEAKRAQPRSQTSR 140
H G E KRA R ++ +
Sbjct 70 RPHSIDGRVVEPKRAVAREESGK 92
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query 1 GRSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPREEARNNQPRR 50
G+ RGFGFVTF++ + ++ +V ++HTI+ EVR+A+ R+E + Q R
Sbjct 138 GKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSR 188
> hsa:3181 HNRNPA2B1, DKFZp779B0244, FLJ22720, HNRNPA2, HNRNPB1,
HNRPA2, HNRPA2B1, HNRPB1, RNPA2, SNRPB1; heterogeneous nuclear
ribonucleoprotein A2/B1; K13158 heterogeneous nuclear
ribonucleoprotein A2/B1
Length=341
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF M ++ + R H+ID VE +RA+ REE+ +P +
Sbjct 48 RSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREES--GKPGAHVTVK----K 101
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+F+GG+ +D + L+++F +G++ + ++ DR++ + RGFGF+ + + + +K +
Sbjct 102 LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Query 119 IHKDLGPNAEAKRAQPRSQ 137
H G NAE ++A R +
Sbjct 162 YHTINGHNAEVRKALSRQE 180
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++FIGGL + T+E L+ ++ ++G+LT VM D + R RGFGF+ + + + + A+
Sbjct 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69
Query 120 --HKDLGPNAEAKRAQPRSQTSR 140
H G E KRA R ++ +
Sbjct 70 RPHSIDGRVVEPKRAVAREESGK 92
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query 1 GRSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPREEARNNQPRR 50
G+ RGFGFVTF++ + ++ +V ++HTI+ EVR+A+ R+E + Q R
Sbjct 138 GKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSR 188
> dre:561459 dazap1; DAZ associated protein 1; K14411 RNA-binding
protein Musashi
Length=418
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 16/146 (10%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRER-------- 52
+SRGFGFV F++ + V+D + H +D ++ + PR QP + R
Sbjct 62 QSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPR----GMQPEKTRTKDGWKGS 117
Query 53 -ETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPE 111
+ S ++F+GG+ + + L+++F+RFG +T ++ D E RPRGFGFI ++ +
Sbjct 118 KSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQ 177
Query 112 DAEKALGI--HKDLGPNAEAKRAQPR 135
++A+ + H +G E K+A+PR
Sbjct 178 SVDQAVNMHFHDIMGKKVEVKKAEPR 203
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query 59 GRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG 118
G++F+GGL T E L+ +FS++GE+ +M D+ TN+ RGFGF+ +K+P L
Sbjct 23 GKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLD 82
Query 119 I--HKDLGPNAEAKRAQPR 135
H G N + K PR
Sbjct 83 TKPHNLDGRNIDPKPCTPR 101
> mmu:11991 Hnrnpd, Auf1, C230004L04, Hnrpd; heterogeneous nuclear
ribonucleoprotein D; K13044 heterogeneous nuclear ribonucleoprotein
A/B/D
Length=355
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 13/118 (11%)
Query 1 GRSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSG 59
GRSRGFGFV F+E E+++ V+D + H ++ ++ +RA + +T E
Sbjct 135 GRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA------------KAMKTKEPVK 182
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL 117
++F+GGL D +E ++E+F FGE+ S + +D +TN+ RGF FI +K E +K +
Sbjct 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 240
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++FIGGL D T + LK++FS+FGE+ ++ +D T R RGFGF+++K E +K +
Sbjct 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query 120 --HKDLGPNAEAKRAQPRSQTSRMRMFGMGGM 149
HK G + KRA+ ++ +GG+
Sbjct 158 KEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGL 189
> dre:406594 fd36h02, wu:fd36h02; zgc:77052
Length=309
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 16/138 (11%)
Query 1 GRSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSG 59
GRSRGFGF+ F+E ++++ V+ + H +D Q++ +RA+ A +P +
Sbjct 83 GRSRGFGFILFKESDSVDRVLQQKEHRLDGRQIDPKRAM----AIKKEPVK--------- 129
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL-- 117
++F+GGL + T+E ++E+F FGE+ + + D +T++ RGF FI +K +K L
Sbjct 130 KIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEK 189
Query 118 GIHKDLGPNAEAKRAQPR 135
H G E K AQP+
Sbjct 190 KYHNVCGSKCEIKIAQPK 207
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query 56 ENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEK 115
E++G++F+GGL D + + LK++FS+FGE+ ++ +D T R RGFGFI++K + ++
Sbjct 42 EDAGKMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDR 101
Query 116 ALGI--HKDLGPNAEAKRAQPRSQTSRMRMFGMGGM 149
L H+ G + KRA + ++F +GG+
Sbjct 102 VLQQKEHRLDGRQIDPKRAMAIKKEPVKKIF-VGGL 136
> dre:393467 MGC66127; zgc:66127; K12741 heterogeneous nuclear
ribonucleoprotein A1/A3
Length=388
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query 2 RSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVT+ + ++ +D R H +D VE +RA+ RE++ ++P +
Sbjct 54 RSRGFGFVTYSSVGEVDAAMDARPHKVDGRAVEPKRAVSREDS--SKPGAHSTVK----K 107
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+F+GG+ +D +E L+E+F +FG++ ++M ++ +++ RGF FI + + + ++ +
Sbjct 108 MFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQK 167
Query 119 IHKDLGPNAEAKRAQPRSQTSRMRM 143
H G N E ++A R +R+ M
Sbjct 168 YHTVNGHNCEVRKALSREGMNRVSM 192
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALGI 119
++FIGGL + TDE L+ F ++G LT VM D T R RGFGF+ Y + + + A+
Sbjct 16 KLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEVDAAMDA 75
Query 120 --HKDLGPNAEAKRAQPRSQTSR 140
HK G E KRA R +S+
Sbjct 76 RPHKVDGRAVEPKRAVSREDSSK 98
> xla:380082 hnrnpa2b1, MGC53135, hnrnpa2, hnrnpb1, hnrpa2, hnrpa2b1,
hnrpb1, rnpa2, snrpb1; heterogeneous nuclear ribonucleoprotein
A2/B1; K13158 heterogeneous nuclear ribonucleoprotein
A2/B1
Length=346
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query 2 RSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPREEARNNQPRRERETTENSGR 60
RSRGFGFVTF M ++ + R HTID VE +RA+ REE+ +P +
Sbjct 48 RSRGFGFVTFSCMNEVDAAMATRPHTIDGRVVEPKRAVAREESA--KPGAHVTVK----K 101
Query 61 VFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL--G 118
+F+GG+ +D + L+E+F +G++ S ++ D+++ + RGF F+ + + + +K +
Sbjct 102 LFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQK 161
Query 119 IHKDLGPNAEAKRAQPRSQ 137
H G NAE ++A + +
Sbjct 162 YHTINGHNAEVRKALSKQE 180
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYK--NPEDAEKAL 117
++FIGGL + T+E L+ ++ ++G LT VM D + R RGFGF+ + N DA A
Sbjct 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69
Query 118 GIHKDLGPNAEAKRAQPRSQTSR 140
H G E KRA R ++++
Sbjct 70 RPHTIDGRVVEPKRAVAREESAK 92
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query 1 GRSRGFGFVTFEEMETINNVV-DRHHTIDESQVEVRRAIPREEARNNQPRR 50
G+ RGF FVTF++ + ++ +V ++HTI+ EVR+A+ ++E ++ Q R
Sbjct 138 GKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEMQDVQNTR 188
> hsa:3184 HNRNPD, AUF1, AUF1A, HNRPD, P37, hnRNPD0; heterogeneous
nuclear ribonucleoprotein D (AU-rich element RNA binding
protein 1, 37kDa); K13044 heterogeneous nuclear ribonucleoprotein
A/B/D
Length=287
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 13/118 (11%)
Query 1 GRSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSG 59
GRSRGFGFV F+E E+++ V+D + H ++ ++ +RA + +T E
Sbjct 116 GRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA------------KAMKTKEPVK 163
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL 117
++F+GGL D +E ++E+F FGE+ S + +D +TN+ RGF FI +K E +K +
Sbjct 164 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 221
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query 56 ENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEK 115
E+ G++FIGGL D T + LK++FS+FGE+ ++ +D T R RGFGF+++K E +K
Sbjct 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query 116 ALGI--HKDLGPNAEAKRAQPRSQTSRMRMFGMGGM 149
+ HK G + KRA+ ++ +GG+
Sbjct 135 VMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGL 170
> cpv:cgd5_3270 RNA recognition motif (RRM)-containing protein
Length=202
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query 1 GRSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPR----------------EEA 43
GRSRGFGFVTF++ +T+ V + H I V+ +RA PR E
Sbjct 46 GRSRGFGFVTFKDPKTVEIVQNITPHIIMGKVVDCKRASPRNTNLMIKEYFEDITKNENT 105
Query 44 RNNQPRRERETTENSGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFG 103
N + +N ++F+GGL D+T E K +F RFG + A ++ D+ RPRGFG
Sbjct 106 PENYNNAVTKGIKNVSKIFVGGL-PDLTLEEFKIYFQRFGNIKDAVLITDKNNGRPRGFG 164
Query 104 FIIYKNPE---DAEKALGIHKDLGPNAEAKRAQPR 135
F+ +++ + + K H G E KRA PR
Sbjct 165 FVTFESVDAVNNVTKFYSNHYLKGKWVECKRALPR 199
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query 58 SGRVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKAL 117
SG++F+GGL VT +L E+F +FG + A VM D + R RGFGF+ +K+P+ E
Sbjct 7 SGKIFVGGLSQQVTSSILMEYFLQFGVILDAVVMYDNVSGRSRGFGFVTFKDPKTVEIVQ 66
Query 118 GI--HKDLGPNAEAKRAQPRSQTSRMR 142
I H +G + KRA PR+ ++
Sbjct 67 NITPHIIMGKVVDCKRASPRNTNLMIK 93
> dre:406701 hnrpdl, wu:fa11d08, zgc:66169; heterogeneous nuclear
ribonucleoprotein D-like; K13044 heterogeneous nuclear ribonucleoprotein
A/B/D
Length=296
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 15/138 (10%)
Query 1 GRSRGFGFVTFEEMETINNVVD-RHHTIDESQVEVRRAIPREEARNNQPRRERETTENSG 59
GRSRGFGFV F++ E+++ V++ H +D ++ +RA + + +P +
Sbjct 68 GRSRGFGFVLFKDAESVDRVLELTEHKLDGKLIDPKRA---KAIKGKEPPK--------- 115
Query 60 RVFIGGLGDDVTDEVLKEFFSRFGELTSASVMVDRETNRPRGFGFIIYKNPEDAEKALG- 118
+VF+GGL D+T+E L+E+F +GE+ S + D +TN RGF F+ + E +K L
Sbjct 116 KVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQKLLEN 175
Query 119 -IHKDLGPNAEAKRAQPR 135
H+ E K AQP+
Sbjct 176 RYHQIGSGKCEIKVAQPK 193
Lambda K H
0.318 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3962792044
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40