bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_2303_orf2
Length=60
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_016880 receptor for activated C kinase, RACK protei... 105 3e-23
pfa:PF08_0019 PfRACK; receptor for activated C kinase homolog,... 94.0 1e-19
dre:30722 gnb2l1, rack1, wu:fb80d08, wu:fk65d12; guanine nucle... 91.7 5e-19
xla:495666 gnb2l1, gnb2-rs1, h12.3, hlc-7, pig21, rack1; guani... 90.1 2e-18
mmu:14694 Gnb2l1, AL033335, GB-like, Gnb2-rs1, Rack1, p205; gu... 90.1 2e-18
hsa:10399 GNB2L1, Gnb2-rs1, H12.3, HLC-7, PIG21, RACK1; guanin... 90.1 2e-18
xla:446289 MGC130692; hypothetical protein LOC446289; K00567 m... 89.7 2e-18
xla:379825 gnb2l1, MGC53289; guanine nucleotide binding protei... 89.7 2e-18
cpv:cgd2_1870 guanine nucleotide-binding protein ; K14753 guan... 88.2 7e-18
tpv:TP04_0288 guanine nucleotide-binding protein; K14753 guani... 84.7 6e-17
cel:K04D7.1 rack-1; RACK1 (mammalian Receptor of Activated C K... 84.0 1e-16
ath:AT1G18080 ATARCA; ATARCA; nucleotide binding; K14753 guani... 77.0 1e-14
ath:AT3G18130 RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C);... 74.7 7e-14
bbo:BBOV_II003050 18.m06254; receptor for activated C kinase, ... 71.6 6e-13
ath:AT1G48630 RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B);... 70.9 1e-12
xla:734519 poc1b, MGC114911, pix1, tuwd12, wdr51b; POC1 centri... 47.4 1e-05
sce:YMR116C ASC1, CPC2; Asc1p; K14753 guanine nucleotide-bindi... 44.7 8e-05
hsa:282809 POC1B, FLJ14923, FLJ41111, PIX1, TUWD12, WDR51B; PO... 44.3 1e-04
mmu:382406 Poc1b, 4933430F16Rik, Wdr51b; POC1 centriolar prote... 44.3 1e-04
dre:541405 pex7, zgc:103552; peroxisomal biogenesis factor 7; ... 43.5 2e-04
dre:386932 poc1b, TUWD12, fl36w17, wdr51b, wu:fl36w17, zgc:635... 43.5 2e-04
xla:379573 poc1a, MGC69111, pix2, wdr51a; POC1 centriolar prot... 41.2 8e-04
cpv:cgd7_5010 coatomer complex beta 40.8 0.001
mmu:70235 Poc1a, 2510040D07Rik, Wdr51a; POC1 centriolar protei... 40.4 0.002
ath:AT3G16830 TPR2; TPR2 (TOPLESS-RELATED 2) 40.4 0.002
mmu:74187 Katnb1, 2410003J24Rik, KAT; katanin p80 (WD40-contai... 40.0 0.002
hsa:10300 KATNB1, KAT; katanin p80 (WD repeat containing) subu... 40.0 0.002
ath:AT5G23430 transducin family protein / WD-40 repeat family ... 40.0 0.002
dre:406291 katnb1, wu:fj32f02, wu:fj65h01, zgc:56071; katanin ... 38.5 0.005
ath:AT5G08390 hypothetical protein 38.5 0.005
ath:AT1G47610 transducin family protein / WD-40 repeat family ... 38.5 0.006
hsa:25886 POC1A, DKFZp434C245, MGC131902, PIX2, WDR51A; POC1 c... 38.5 0.006
cel:T02H6.1 hypothetical protein; K14793 ribosomal RNA-process... 38.1 0.006
hsa:5191 PEX7, PTS2R, RCDP1, RD; peroxisomal biogenesis factor... 38.1 0.006
dre:406322 poc1a, wdr51a, wu:fl82d01, zgc:56055; POC1 centriol... 38.1 0.006
sce:YDL145C COP1, RET1, SEC33, SOO1; Alpha subunit of COPI ves... 38.1 0.007
xla:380367 nle1, MGC52549, nle; notchless homolog 1; K14855 ri... 38.1 0.007
dre:100004402 plrg1, MGC174842, MGC55651, MGC86603, wu:fi74f01... 37.7 0.008
tgo:TGME49_040650 coatomer alpha subunit, putative (EC:2.7.11.... 37.7 0.008
tpv:TP04_0666 hypothetical protein; K12862 pleiotropic regulat... 37.7 0.010
xla:398057 paaf1, paaf, rpn14, wdr71; proteasomal ATPase-assoc... 37.4 0.012
xla:495399 plrg1; pleiotropic regulator 1 (PRL1 homolog); K128... 37.4 0.013
tpv:TP04_0117 zinc finger protein 37.4 0.013
xla:495006 hypothetical LOC495006 37.0 0.014
hsa:5356 PLRG1, MGC110980, PRL1, PRP46, PRPF46; pleiotropic re... 37.0 0.014
mmu:53317 Plrg1, AA958940, C80566; pleiotropic regulator 1, PR... 37.0 0.015
pfa:PFC0100c regulatory protein, putative; K12862 pleiotropic ... 37.0 0.016
sce:YPR178W PRP4, RNA4; Prp4p; K12662 U4/U6 small nuclear ribo... 37.0 0.017
cel:D1054.15 tag-135; Temporarily Assigned Gene name family me... 36.6 0.018
xla:444261 apaf1, MGC80868, apaf-1; apoptotic peptidase activa... 36.6 0.019
> tgo:TGME49_016880 receptor for activated C kinase, RACK protein,
putative (EC:2.7.11.7); K14753 guanine nucleotide-binding
protein subunit beta-2-like 1 protein
Length=321
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 54/60 (90%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YTI + QH DWVSCVRFSPS +PLIVSCGWDKLVKVW+L++CKL TNLVGHTSVLYTVT
Sbjct 145 YTIVDDQHNDWVSCVRFSPSANKPLIVSCGWDKLVKVWNLSNCKLRTNLVGHTSVLYTVT 204
> pfa:PF08_0019 PfRACK; receptor for activated C kinase homolog,
PfRACK; K14753 guanine nucleotide-binding protein subunit
beta-2-like 1 protein
Length=323
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YTI + QHTDW++CVRFSPSP + +IVSCGWDKLVKVW+L +C L NL GHT VL TVT
Sbjct 149 YTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVT 208
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query 5 EGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLT----SCKLIT---NLVGHTSVLY 57
EG H+DWV+ V PK IVS DK + VW++ S ++ T +L GH+ +
Sbjct 17 EGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIN 76
Query 58 TVT 60
V+
Sbjct 77 DVS 79
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 0/36 (0%)
Query 25 LIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
+S WD V++W L+ + I + +GHTS +++V+
Sbjct 86 FALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVS 121
> dre:30722 gnb2l1, rack1, wu:fb80d08, wu:fk65d12; guanine nucleotide
binding protein (G protein), beta polypeptide 2-like
1; K14753 guanine nucleotide-binding protein subunit beta-2-like
1 protein
Length=317
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YTI++ HT+WVSCVRFSP+ P+IVSCGWDK+VKVW+L +CKL TN +GHT L TVT
Sbjct 140 YTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVT 199
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ +VS V S + +S WD +++W LT+ VGHT + +V
Sbjct 62 HSHFVSDVVISSDGQ--FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
> xla:495666 gnb2l1, gnb2-rs1, h12.3, hlc-7, pig21, rack1; guanine
nucleotide binding protein (G protein), beta polypeptide
2-like 1; K14753 guanine nucleotide-binding protein subunit
beta-2-like 1 protein
Length=317
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 49/60 (81%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YT+++ H++WVSCVRFSP+ P+IVSCGWDKLVKVW+L +CKL TN +GHT L TVT
Sbjct 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVT 199
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ +VS V S + +S WD +++W LT+ VGHT + +V
Sbjct 62 HSHFVSDVVISSDGQ--FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
> mmu:14694 Gnb2l1, AL033335, GB-like, Gnb2-rs1, Rack1, p205;
guanine nucleotide binding protein (G protein), beta polypeptide
2 like 1; K14753 guanine nucleotide-binding protein subunit
beta-2-like 1 protein
Length=317
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 49/60 (81%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YT+++ H++WVSCVRFSP+ P+IVSCGWDKLVKVW+L +CKL TN +GHT L TVT
Sbjct 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVT 199
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ +VS V S + +S WD +++W LT+ VGHT + +V
Sbjct 62 HSHFVSDVVISSDGQ--FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
> hsa:10399 GNB2L1, Gnb2-rs1, H12.3, HLC-7, PIG21, RACK1; guanine
nucleotide binding protein (G protein), beta polypeptide
2-like 1; K14753 guanine nucleotide-binding protein subunit
beta-2-like 1 protein
Length=317
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 49/60 (81%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YT+++ H++WVSCVRFSP+ P+IVSCGWDKLVKVW+L +CKL TN +GHT L TVT
Sbjct 140 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVT 199
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ +VS V S + +S WD +++W LT+ VGHT + +V
Sbjct 62 HSHFVSDVVISSDGQ--FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
> xla:446289 MGC130692; hypothetical protein LOC446289; K00567
methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Length=317
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YT++E H++WVSCVRFSP+ P+IVSCGWDK+VKVW+L +CKL TN +GH+ L TVT
Sbjct 140 YTVQEESHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHSGYLNTVT 199
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ +VS V S + +S WD +++W LT+ VGHT + +V
Sbjct 62 HSHFVSDVVISSDGQ--FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
> xla:379825 gnb2l1, MGC53289; guanine nucleotide binding protein,
beta 2, related sequence 1; K14753 guanine nucleotide-binding
protein subunit beta-2-like 1 protein
Length=317
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YT++E H++WVSCVRFSP+ P+IVSCGWDK+VKVW+L +CKL TN +GH+ L TVT
Sbjct 140 YTVQEESHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHSGYLNTVT 199
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ +VS V S + +S WD +++W LT+ VGHT + +V
Sbjct 62 HSHFVSDVVISSDGQ--FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
> cpv:cgd2_1870 guanine nucleotide-binding protein ; K14753 guanine
nucleotide-binding protein subunit beta-2-like 1 protein
Length=313
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YT+ +GQH DWVSCVRFSPS +PL VSCGWDK+VKVWS K NLVGH+SVLYTVT
Sbjct 143 YTLLDGQHNDWVSCVRFSPSTSQPLFVSCGWDKIVKVWS-HEFKPTCNLVGHSSVLYTVT 201
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 0/35 (0%)
Query 26 IVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
+VS DK ++++ + + K + N VGHTS +++V
Sbjct 81 VVSGSCDKTLRLFDVNAGKSVRNFVGHTSDVFSVA 115
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCK--------LITNLVGHTSVLYTV 59
H+DWV+ + +P ++VS DK V VW+L+ T L GH + V
Sbjct 14 HSDWVTSIA-APPDNSDIVVSASRDKSVLVWNLSDANKDQHSIGSAKTRLTGHNQAVNDV 72
Query 60 T 60
Sbjct 73 A 73
> tpv:TP04_0288 guanine nucleotide-binding protein; K14753 guanine
nucleotide-binding protein subunit beta-2-like 1 protein
Length=331
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YTI HTDWVSCVRFSPS KEP+ VS GWDKL+KVW L +C+L L GH V+Y+V+
Sbjct 153 YTITNSTHTDWVSCVRFSPSGKEPIFVSGGWDKLIKVWDLRTCQLKHTLYGHEGVVYSVS 212
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWS-LTSCKL-ITN 48
HT V+ V FSP ++ I+S DK +K+W+ L CK ITN
Sbjct 117 HTKDVNSVAFSPDNRQ--IISGSRDKTIKLWNTLAECKYTITN 157
> cel:K04D7.1 rack-1; RACK1 (mammalian Receptor of Activated C
Kinase) homolog family member (rack-1); K14753 guanine nucleotide-binding
protein subunit beta-2-like 1 protein
Length=325
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 48/60 (80%), Gaps = 0/60 (0%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
YTI + HTDWVS VRFSPS ++P+IVS GWDK+VKVW+L +C+L TN +GHT + TVT
Sbjct 146 YTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVT 205
> ath:AT1G18080 ATARCA; ATARCA; nucleotide binding; K14753 guanine
nucleotide-binding protein subunit beta-2-like 1 protein
Length=327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query 1 YTIEEGQ--HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYT 58
YTI EG H DWVSCVRFSP+ +P IVS WDK VKVW+L++CKL + L GHT + T
Sbjct 140 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVST 199
Query 59 VT 60
V
Sbjct 200 VA 201
> ath:AT3G18130 RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C);
nucleotide binding; K14753 guanine nucleotide-binding protein
subunit beta-2-like 1 protein
Length=326
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query 1 YTIEEGQ-HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
YTI EG H +WVSCVRFSP+ P IVS WDK VKVW+L +CKL +LVGH+ L TV
Sbjct 140 YTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTV 199
Query 60 T 60
Sbjct 200 A 200
> bbo:BBOV_II003050 18.m06254; receptor for activated C kinase,
RACK protein; K14753 guanine nucleotide-binding protein subunit
beta-2-like 1 protein
Length=322
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 0/52 (0%)
Query 5 EGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVL 56
+ H DWVSCVRFSP+P E + VS GWDK+VKVW L +C L NL GH ++
Sbjct 148 QNAHNDWVSCVRFSPNPHEHVFVSGGWDKIVKVWDLANCNLKFNLSGHEGIV 199
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
Query 25 LIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
+S WD +++W L CK + GHTS +Y+V
Sbjct 82 FALSGSWDNTLRLWDLVKCKTVHVYNGHTSDVYSV 116
> ath:AT1G48630 RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B);
nucleotide binding; K14753 guanine nucleotide-binding protein
subunit beta-2-like 1 protein
Length=326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query 1 YTIEEGQ-HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
YTI E H +WVSCVRFSP+ P IVS WDK VKVW+L +CKL L GH+ L TV
Sbjct 140 YTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTV 199
Query 60 T 60
Sbjct 200 A 200
> xla:734519 poc1b, MGC114911, pix1, tuwd12, wdr51b; POC1 centriolar
protein homolog B (Chlamydomonas)
Length=468
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLV---GHTS 54
QHT+WV C RFSP + LI SC DK V++W LT+ I V GH++
Sbjct 142 QHTNWVRCARFSPDGR--LIASCSDDKTVRIWDLTNRLCINTFVDYKGHSN 190
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H + V+CV+FSPS L+ S D+ V++W+ T L HT+V+ V
Sbjct 59 HKEAVTCVQFSPSGH--LVASSSKDRTVRLWAPNIKGESTVLKAHTAVVRCVN 109
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVL 56
H D V+CV FSP K+ + S D V +W+ GH +
Sbjct 17 HKDAVTCVDFSPDSKQ--LASSSADACVMIWNFKPQSRAYKYPGHKEAV 63
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTS 54
HT V CV FS + ++ DK +K W+L + + +L HT+
Sbjct 101 HTAVVRCVNFSSDGQ--TFITASDDKSIKAWNLHRQRFLFSLTQHTN 145
> sce:YMR116C ASC1, CPC2; Asc1p; K14753 guanine nucleotide-binding
protein subunit beta-2-like 1 protein
Length=319
Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query 8 HTDWVSCVRFSPSPKEP----LIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H DWVS VR P+ K I+S G DK+VK W+L ++ + +GH S + T+T
Sbjct 147 HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLT 203
> hsa:282809 POC1B, FLJ14923, FLJ41111, PIX1, TUWD12, WDR51B;
POC1 centriolar protein homolog B (Chlamydomonas)
Length=436
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNL 49
+HT WV C +FSP + LIVSC DK +K+W T+ + + N
Sbjct 100 RHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNF 140
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H+ V+C+ F PS +++ D +K+ L +LI L GHT ++TV+
Sbjct 185 HSGGVNCISFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 235
> mmu:382406 Poc1b, 4933430F16Rik, Wdr51b; POC1 centriolar protein
homolog B (Chlamydomonas)
Length=476
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNL 49
+HT WV C +FSP + LIVSC DK +K+W T+ + + N
Sbjct 142 RHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNF 182
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H+ V+C+ F P +V+ D VK+ L +LI L GHT ++TV+
Sbjct 227 HSCGVNCLSFHPLGNS--LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVS 277
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query 4 EEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHT 53
E HT V V FS + L+V+ DK +KVWS+ + + +L HT
Sbjct 97 EFKAHTAPVRSVDFSADGQ--LLVTASEDKSIKVWSMFRQRFLYSLYRHT 144
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H ++ FSP+ K+ I + WD + +WSL VGH V+ ++
Sbjct 17 HKAAITSADFSPNCKQ--IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
> dre:541405 pex7, zgc:103552; peroxisomal biogenesis factor 7;
K13341 peroxin-7
Length=314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 0/51 (0%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYT 58
HT V V +S + E L+VS WD KVW C+L+ +L GH V+Y+
Sbjct 102 HTQEVYSVDWSQTRAENLLVSGSWDHTAKVWDPVQCQLVNSLQGHEGVIYS 152
> dre:386932 poc1b, TUWD12, fl36w17, wdr51b, wu:fl36w17, zgc:63538;
POC1 centriolar protein homolog B (Chlamydomonas)
Length=490
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTS 42
+HT+WV C RFSP + LI SCG D+ V++W +S
Sbjct 142 RHTNWVRCARFSPDGR--LIASCGDDRTVRLWDTSS 175
Score = 35.4 bits (80), Expect = 0.049, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H D +SC F+P+ K+ SC DK + +W+L VGHT V+ V
Sbjct 17 HKDVISCADFNPNNKQLATGSC--DKSLMIWNLAPKARAFRFVGHTDVITGV 66
Score = 29.6 bits (65), Expect = 2.8, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H V+C F PS ++S D +K+ L +LI L GH + TVT
Sbjct 227 HNAGVNCFSFHPSGN--YLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVT 277
> xla:379573 poc1a, MGC69111, pix2, wdr51a; POC1 centriolar protein
homolog A (Chlamydomonas)
Length=399
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGH 52
QH +WV C +FSP + LIVS DK +K+W TS + I + H
Sbjct 100 QHINWVRCAKFSPDGR--LIVSASDDKTIKLWDKTSRECIQSFCEH 143
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
+H +V+ V F PS I + D VKVW + KLI + H+ V+ +++
Sbjct 142 EHGGFVNFVDFHPSGT--CIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLS 193
> cpv:cgd7_5010 coatomer complex beta
Length=1157
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 0/52 (0%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H ++C+ +SPS ++P I + DK V+VW + + I L GHT + +V
Sbjct 198 HEGGINCLAYSPSAEKPYIATGSDDKTVRVWDYQTKQCIQVLTGHTKAVRSV 249
> mmu:70235 Poc1a, 2510040D07Rik, Wdr51a; POC1 centriolar protein
homolog A (Chlamydomonas)
Length=405
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGH 52
QH +WV C +FSP + LIVS DK VK+W TS + I + H
Sbjct 143 QHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSRECIHSYCEH 186
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H D V+CV FSPS L+ S DK V++W T HT+ + +V
Sbjct 60 HKDAVTCVNFSPSGH--LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
> ath:AT3G16830 TPR2; TPR2 (TOPLESS-RELATED 2)
Length=1131
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query 3 IEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
+E H V+ + F+ K+ +V+CG DKL+KVW L+ KL T GH + +Y++
Sbjct 447 LEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFT-FEGHEAPVYSI 502
> mmu:74187 Katnb1, 2410003J24Rik, KAT; katanin p80 (WD40-containing)
subunit B 1
Length=658
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ V C+RFSP K + S D VK+W LT+ K+++ GHT + V
Sbjct 146 HSQAVRCLRFSPDGK--WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTS 54
HT V VR + +P+E LIV+ ++VW L + K++ L+GH +
Sbjct 62 HTSPVESVRLN-TPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
> hsa:10300 KATNB1, KAT; katanin p80 (WD repeat containing) subunit
B 1
Length=655
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ V C+RFSP K + S D VK+W LT+ K+++ GHT + V
Sbjct 146 HSQAVRCLRFSPDGK--WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTS 54
HT V VR + +P+E LIV+ ++VW L + K++ L+GH +
Sbjct 62 HTSPVESVRLN-TPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
> ath:AT5G23430 transducin family protein / WD-40 repeat family
protein
Length=836
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGH 52
HT V+ +RF+P + +VS G D +VKVW LT+ KL+T H
Sbjct 142 HTRGVNVLRFTPDGR--WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 28.1 bits (61), Expect = 7.2, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTS 54
H+ + V F S E L+ + +K+W L K++ L GH S
Sbjct 58 HSSGIDSVTFDAS--EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Score = 28.1 bits (61), Expect = 7.3, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H+ V+C++ ++V+ G D V +W++ I +L GH+S + +VT
Sbjct 15 HSAAVNCLKIGRKSSR-VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
> dre:406291 katnb1, wu:fj32f02, wu:fj65h01, zgc:56071; katanin
p80 (WD repeat containing) subunit B 1
Length=694
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
HT V C+ FSP K + S D VK+W L + K+IT HTS + V
Sbjct 146 HTQAVRCLAFSPDGK--WLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVV 195
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
HT V+ V+F P+ E L+ S D+ VK+W L +I + G T V+ +V
Sbjct 188 HTSAVNVVQFHPN--EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSV 237
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
HT V C++F+ S E +V+ +++W L + K++ L+GH + + ++
Sbjct 62 HTSAVGCIQFNSS--EERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSL 111
> ath:AT5G08390 hypothetical protein
Length=839
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
HT V+ +RF+P + IVS G D +VKVW LT+ KL+ H + ++
Sbjct 142 HTRGVNVLRFTPDGR--WIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL 191
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTS 54
H+ + V F S E L+ + +K+W L K++ L GH S
Sbjct 58 HSSGIDSVTFDAS--EGLVAAGAASGTIKLWDLEEAKVVRTLTGHRS 102
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H+ V+C++ ++V+ G D V +W++ I +L GH+S + +VT
Sbjct 15 HSAAVNCLKIGRKSSR-VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
> ath:AT1G47610 transducin family protein / WD-40 repeat family
protein
Length=351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
+H+D VSC S + + L+ S WD+ VKVW + K I ++ H + +VT
Sbjct 133 KHSDAVSC--LSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVT 184
> hsa:25886 POC1A, DKFZp434C245, MGC131902, PIX2, WDR51A; POC1
centriolar protein homolog A (Chlamydomonas)
Length=359
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGH 52
QH +WV C +FSP + LIVS DK VK+W +S + + + H
Sbjct 143 QHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKSSRECVHSYCEH 186
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H D V+CV FSPS L+ S DK V++W + N+ G ++V T
Sbjct 60 HKDAVTCVNFSPSGH--LLASGSRDKTVRIW-------VPNVKGESTVFRAHT 103
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVL 56
+H +V+ V F PS I + G D VKVW + + +L+ + H++ +
Sbjct 185 EHGGFVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
> cel:T02H6.1 hypothetical protein; K14793 ribosomal RNA-processing
protein 9
Length=540
Score = 38.1 bits (87), Expect = 0.006, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 0/41 (0%)
Query 20 SPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
SP + I S G+D++VK+W+ S + I +L GH ++++T
Sbjct 205 SPDQKFIASGGFDQVVKIWNFDSLEHIKDLSGHRGPIFSLT 245
> hsa:5191 PEX7, PTS2R, RCDP1, RD; peroxisomal biogenesis factor
7; K13341 peroxin-7
Length=323
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 0/52 (0%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYT 58
+H V V +S + E L+VS WD+ VK+W T K + GH S++Y+
Sbjct 109 EHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYS 160
> dre:406322 poc1a, wdr51a, wu:fl82d01, zgc:56055; POC1 centriolar
protein homolog A (Chlamydomonas)
Length=416
Score = 38.1 bits (87), Expect = 0.006, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLI 46
+H +WV C RFSP + L+VS D+ VK+W +S +LI
Sbjct 142 EHNNWVRCARFSPDGQ--LMVSVSDDRTVKLWDASSRQLI 179
Score = 31.2 bits (69), Expect = 0.75, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVW 38
H D V+CV+FSPS L+ S DK V++W
Sbjct 59 HKDAVTCVQFSPSAH--LLASSSRDKTVRLW 87
> sce:YDL145C COP1, RET1, SEC33, SOO1; Alpha subunit of COPI vesicle
coatomer complex, which surrounds transport vesicles
in the early secretory pathway; K05236 coatomer protein complex,
subunit alpha (xenin)
Length=1201
Score = 38.1 bits (87), Expect = 0.007, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 0/39 (0%)
Query 21 PKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
P +P+ VS G D +KVWSL + K + L GH + TV
Sbjct 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTV 101
Score = 30.0 bits (66), Expect = 2.1, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCK 44
H +V C +F P+ + LIVS D+ +++W ++ +
Sbjct 136 HNHFVMCAQFHPT--DDLIVSASLDETIRIWDISGLR 170
Score = 29.6 bits (65), Expect = 2.6, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query 3 IEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKL--ITNLVGHTS 54
I EG HT V+ F P+ PLIVS D+ VK+W +++ K + GHT+
Sbjct 204 ILEG-HTRGVNWASFHPTL--PLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTN 254
Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSL 40
HT+ V V F P + LI+S G DK ++VW L
Sbjct 252 HTNNVDSVIFHP--HQNLIISVGEDKTLRVWDL 282
Score = 28.1 bits (61), Expect = 6.5, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGH 52
H D+V V F + P I+S D+ +++W+ + K I L GH
Sbjct 94 HLDYVRTVFFHR--ELPWIISASDDQTIRIWNWQNRKEIACLTGH 136
> xla:380367 nle1, MGC52549, nle; notchless homolog 1; K14855
ribosome assembly protein 4
Length=476
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H ++ V FSP + +I S +DK +K+W + K +T+L GH S +Y +
Sbjct 362 HQALINEVLFSPDTR--IIASASFDKSIKLWDGKTGKFLTSLRGHVSAVYQIA 412
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
Query 20 SPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
S L+VS D +KVW + KL+ +L GH +Y+V
Sbjct 414 SADSRLLVSGSSDSTLKVWDSKTKKLLIDLPGHADEVYSV 453
> dre:100004402 plrg1, MGC174842, MGC55651, MGC86603, wu:fi74f01,
zgc:55651, zgc:86603; pleiotropic regulator 1; K12862 pleiotropic
regulator 1
Length=511
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query 9 TDWVSCVR-FSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
T +S VR + S + P + SCG DK VK W L K+I + GH S +Y +
Sbjct 240 TGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDL 291
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
H WV + P + V+ D+ +K+W L S KL +L GH S + V
Sbjct 200 HLGWVRSIAVEPGNQ--WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVA 250
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
Query 25 LIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
++V+C D +VW + + + L GHT+ + TV
Sbjct 299 VLVTCSRDATARVWDIRTKANVHTLSGHTNTVATV 333
> tgo:TGME49_040650 coatomer alpha subunit, putative (EC:2.7.11.7);
K05236 coatomer protein complex, subunit alpha (xenin)
Length=1300
Score = 37.7 bits (86), Expect = 0.008, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
+H V + F S +PL VS G D VK+WSLT+ K I +GH L TV
Sbjct 52 EHEGPVRGIDFHSS--QPLFVSGGDDYKVKLWSLTTRKCIFTFLGHLDYLRTV 102
> tpv:TP04_0666 hypothetical protein; K12862 pleiotropic regulator
1
Length=521
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
Y + +G H WV CV S + VS D+L+K+W L SC+L +L GH + + +
Sbjct 202 YRVIKGHHG-WVHCVDVDISNE--WFVSGSADRLIKIWDLASCELKLSLTGHINTVRDI 257
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 0/41 (0%)
Query 20 SPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
S + P I SC D VK W + K++ + GH S +Y ++
Sbjct 260 STRSPYIFSCSEDNTVKCWDIEQNKVVRSYHGHLSGVYKLS 300
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 0/38 (0%)
Query 23 EPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
EP ++S DK V++W L+ K I L H + ++
Sbjct 347 EPQVISGSQDKTVRLWDLSMGKSIVTLTNHKKSIRAMS 384
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query 21 PKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVL 56
P E SC D VKVW + I N+ GH S+L
Sbjct 387 PTEYSFCSCASDN-VKVWKCPEGQFIRNITGHNSIL 421
> xla:398057 paaf1, paaf, rpn14, wdr71; proteasomal ATPase-associated
factor 1; K11887 proteasomal ATPase-associated factor
1
Length=376
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
HT V C +F PS +E ++S G D LVKVWS+ + L GH + +
Sbjct 110 HTMDVFCCKFFPSGQE--VLSGGLDSLVKVWSVNDGSCLATLKGHRGSILDIA 160
> xla:495399 plrg1; pleiotropic regulator 1 (PRL1 homolog); K12862
pleiotropic regulator 1
Length=517
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 0/38 (0%)
Query 20 SPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLY 57
S + P + SCG DK VK W L K+I + GH S +Y
Sbjct 258 SGRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 295
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H WV C+ P + V+ D+ +K+W L S KL +L GH S + V
Sbjct 206 HLGWVRCLAVEPGNQ--WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 255
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 0/39 (0%)
Query 21 PKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
P ++++C D ++W + + + LVGHT+ + TV
Sbjct 301 PTIDVLITCSRDSTARIWDVKTKASVHTLVGHTNAVATV 339
> tpv:TP04_0117 zinc finger protein
Length=370
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query 3 IEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKL-ITNLVGHTS 54
+ H VS VR+ + ++SCG+D+ V+VW L + K+ + NL GHT+
Sbjct 112 MRTNAHVGLVSYVRYCGQTQ---VMSCGYDRKVRVWDLRNLKIPLHNLTGHTA 161
> xla:495006 hypothetical LOC495006
Length=517
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 0/38 (0%)
Query 20 SPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLY 57
S + P + SCG DK VK W L K+I + GH S +Y
Sbjct 258 SGRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 295
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H WV + P + V+ D+ +K+W L S KL +L GH S + V
Sbjct 206 HLGWVRSLAVEPGNQ--WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 255
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 0/39 (0%)
Query 21 PKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
P ++V+C D ++W + + + LVGHT+ + TV
Sbjct 301 PTIDVLVTCSRDSTARIWDVRTKASVHTLVGHTNAVATV 339
> hsa:5356 PLRG1, MGC110980, PRL1, PRP46, PRPF46; pleiotropic
regulator 1 (PRL1 homolog, Arabidopsis); K12862 pleiotropic
regulator 1
Length=505
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 0/38 (0%)
Query 20 SPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLY 57
S + P + SCG DK VK W L K+I + GH S +Y
Sbjct 246 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 283
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H WV C+ P + V+ D+ +K+W L S KL +L GH S + V
Sbjct 194 HLGWVRCIAVEPGNQ--WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 243
> mmu:53317 Plrg1, AA958940, C80566; pleiotropic regulator 1,
PRL1 homolog (Arabidopsis); K12862 pleiotropic regulator 1
Length=513
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 0/38 (0%)
Query 20 SPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLY 57
S + P + SCG DK VK W L K+I + GH S +Y
Sbjct 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 291
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H WV C+ P + V+ D+ +K+W L S KL +L GH S + V
Sbjct 202 HLGWVRCIAVEPGNQ--WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
> pfa:PFC0100c regulatory protein, putative; K12862 pleiotropic
regulator 1
Length=600
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H+ WV+CV S + D+L+K+W L SCKL L GH + + +
Sbjct 285 HSGWVNCVDVDIS--NEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 0/41 (0%)
Query 20 SPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
S K P + SCG D VK W L K+I + GH S +Y ++
Sbjct 337 SKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLS 377
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query 8 HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
H V C+ PS L++S G D +V+VW + + + L GHT + ++
Sbjct 369 HLSGVYCLSLHPSL--DLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSI 418
> sce:YPR178W PRP4, RNA4; Prp4p; K12662 U4/U6 small nuclear ribonucleoprotein
PRP4
Length=465
Score = 37.0 bits (84), Expect = 0.017, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query 4 EEGQ------HTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHT 53
+EGQ H + V+ VRFS +VSCG+D L+ V+S + + +L GHT
Sbjct 382 DEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHT 437
Score = 30.0 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 0/35 (0%)
Query 25 LIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
L+ S G D L +W + S + L GH+ +YTV
Sbjct 321 LVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTV 355
> cel:D1054.15 tag-135; Temporarily Assigned Gene name family
member (tag-135); K12862 pleiotropic regulator 1
Length=494
Score = 36.6 bits (83), Expect = 0.018, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query 1 YTIEEGQHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTV 59
Y + G HT WV V P + S G D+++K+W L S +L +L GH S + V
Sbjct 177 YRVASG-HTGWVRAVDVEPGNQ--WFASGGADRIIKIWDLASGQLKLSLTGHISSVRAV 232
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query 9 TDWVSCVR-FSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLYTVT 60
T +S VR SP+ P + S G DK VK W L K+I + GH S + ++
Sbjct 223 TGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALS 275
> xla:444261 apaf1, MGC80868, apaf-1; apoptotic peptidase activating
factor 1; K02084 apoptotic protease-activating factor
Length=1248
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 0/51 (0%)
Query 7 QHTDWVSCVRFSPSPKEPLIVSCGWDKLVKVWSLTSCKLITNLVGHTSVLY 57
+HT+ V+C +F+ PL+ +C D + +W + L+GHT +Y
Sbjct 697 EHTEQVNCCQFTNGLSAPLLATCSNDCFIMLWDSETEYSRNTLIGHTGAVY 747
Lambda K H
0.319 0.133 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2069361540
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40