bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_2214_orf2
Length=127
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_072900 DNA repair protein, putative (EC:3.6.3.8); K... 215 4e-56
pfa:PF11_0087 rad51; Rad51 homolog; K04482 DNA repair protein ... 209 2e-54
tpv:TP04_0230 DNA repair protein Rad51; K04482 DNA repair prot... 205 2e-53
cpv:cgd5_410 Rad51 ; K04482 DNA repair protein RAD51 190 1e-48
xla:397726 rad51-a, MGC84850, brcc5, rad51, rad51a, reca, xrad... 186 2e-47
mmu:19361 Rad51, AV304093, Rad51a, Reca; RAD51 homolog (S. cer... 185 2e-47
xla:380251 rad51-b, MGC130792, MGC52570, brcc5, rad51, rad51a,... 185 2e-47
hsa:5888 RAD51, BRCC5, HRAD51, HsRad51, HsT16930, RAD51A, RECA... 185 3e-47
bbo:BBOV_II003540 18.m06297; Rad51 protein; K04482 DNA repair ... 184 6e-47
dre:406487 rad51, wu:fb38e12, zgc:77754; RAD51 homolog (RecA h... 181 3e-46
ath:AT5G20850 ATRAD51; ATP binding / DNA binding / DNA-depende... 167 6e-42
cel:Y43C5A.6 rad-51; RADiation sensitivity abnormal/yeast RAD-... 159 2e-39
sce:YER095W RAD51, MUT5; Rad51p; K04482 DNA repair protein RAD51 143 1e-34
mmu:13404 Dmc1, Dmc1h, MGC151144, Mei11, sgdp; DMC1 dosage sup... 141 5e-34
hsa:11144 DMC1, DMC1H, HsLim15, LIM15, MGC150472, MGC150473, d... 141 6e-34
dre:553953 dmc1, MGC136628, zgc:136628; DMC1 dosage suppressor... 135 3e-32
ath:AT3G22880 DMC1; DMC1 (DISRUPTION OF MEIOTIC CONTROL 1); AT... 133 2e-31
cpv:cgd7_1690 meiotic recombination protein DMC1-like protein ... 131 4e-31
pfa:MAL8P1.76 meiotic recombination protein dmc1-like protein;... 124 6e-29
tgo:TGME49_016400 meiotic recombination protein DMC1-like prot... 124 1e-28
tpv:TP04_0170 meiotic recombination protein DMC1; K04482 DNA r... 121 6e-28
sce:YER179W DMC1, ISC2; Dmc1p; K10872 meiotic recombination pr... 112 2e-25
dre:541414 xrcc3, im:7142103, si:dkey-11b8.1, zgc:101608; X-ra... 57.4 1e-08
dre:450081 rad51c, zgc:101596; rad51 homolog C (S. cerevisiae)... 53.1 2e-07
mmu:114714 Rad51c, R51H3, Rad51l2; RAD51 homolog c (S. cerevis... 42.4 3e-04
ath:AT2G28560 RAD51B; RAD51B; recombinase; K10869 RAD51-like p... 40.4 0.002
ath:AT5G57450 XRCC3; XRCC3; ATP binding / damaged DNA binding ... 35.4 0.042
ath:AT2G45280 ATRAD51C; ATP binding / damaged DNA binding / pr... 32.0 0.54
sce:YDR004W RAD57; Protein that stimulates strand exchange by ... 31.6 0.58
mmu:100048471 killer cell lectin-like receptor 5-like 31.2 0.89
sce:YLR115W CFT2, YDH1; Cft2p 30.4 1.5
ath:AT4G30420 nodulin MtN21 family protein 30.0 1.7
xla:447047 slc7a2.2, CAT-2, CAT2, MGC83504, slc7a2; solute car... 29.6 2.2
mmu:625473 Gm6590, EG625473; predicted gene 6590 28.9
ath:AT4G30993 hypothetical protein 28.1 7.7
xla:495998 ptgr1.1, ltb4dh, pgr1, zadh3; prostaglandin reducta... 27.7 9.2
> tgo:TGME49_072900 DNA repair protein, putative (EC:3.6.3.8);
K04482 DNA repair protein RAD51
Length=354
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/127 (88%), Positives = 118/127 (92%), Gaps = 0/127 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RFALLIVDSAT LYRSE+ GRGELASRQ HLCRFLRCLQRIADTYGVAVVVSNQVVAKVD
Sbjct 228 RFALLIVDSATALYRSEYTGRGELASRQTHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 287
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
N +F+ NEKLPIGGNIMAHASQ RLYLRKG+GESRICKIYDSPSL EGEAVFAIGEGG
Sbjct 288 NMGGMFSGNEKLPIGGNIMAHASQTRLYLRKGRGESRICKIYDSPSLAEGEAVFAIGEGG 347
Query 121 IGDYEDS 127
IGDYED+
Sbjct 348 IGDYEDN 354
> pfa:PF11_0087 rad51; Rad51 homolog; K04482 DNA repair protein
RAD51
Length=350
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 112/126 (88%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RFALLIVDSAT LYRSE+ GRGELA+RQ HLCRFLR LQRIAD YGVAV+++NQVVAKVD
Sbjct 225 RFALLIVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVAKVD 284
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
S+F +EK+PIGGNI+AHASQ RLYLRKG+GESRICKIYDSP LPEGEAVFAI EGG
Sbjct 285 -AMSMFGGHEKIPIGGNIIAHASQTRLYLRKGRGESRICKIYDSPVLPEGEAVFAITEGG 343
Query 121 IGDYED 126
I DYE+
Sbjct 344 IADYEE 349
> tpv:TP04_0230 DNA repair protein Rad51; K04482 DNA repair protein
RAD51
Length=343
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 112/126 (88%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RFALLIVDSAT LYRS+++GRGELASRQMHLC+FLR LQRIADT+GVAVV++NQVVAKVD
Sbjct 218 RFALLIVDSATSLYRSDYSGRGELASRQMHLCKFLRALQRIADTFGVAVVITNQVVAKVD 277
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
S F N+KLP+GG+I+AHASQ RL+LR+ KGESRICKIYDSP LPEGEAVFAI +GG
Sbjct 278 -AMSTFFGNDKLPVGGHIIAHASQTRLFLRQSKGESRICKIYDSPVLPEGEAVFAITDGG 336
Query 121 IGDYED 126
I DY D
Sbjct 337 INDYHD 342
> cpv:cgd5_410 Rad51 ; K04482 DNA repair protein RAD51
Length=347
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 111/126 (88%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RFAL+IVDSAT LYRSE+ GRGELA+RQ HL +FLR LQ+IADT+GVAVV++NQV++KVD
Sbjct 221 RFALMIVDSATALYRSEYNGRGELATRQSHLGQFLRALQKIADTFGVAVVITNQVMSKVD 280
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
++F N+K+PIGGNI+AHASQ RL+L+KG+GE+RICKIYDSP+LPEG+A F+I EGG
Sbjct 281 AMAAMFQ-NDKVPIGGNIIAHASQTRLFLKKGRGETRICKIYDSPNLPEGDATFSITEGG 339
Query 121 IGDYED 126
I D +D
Sbjct 340 INDPKD 345
> xla:397726 rad51-a, MGC84850, brcc5, rad51, rad51a, reca, xrad51;
RAD51 homolog (RecA homolog); K04482 DNA repair protein
RAD51
Length=336
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
R+ALLIVDSAT LYR++++GRGEL++RQMHL RFLR L R+AD +GVAVV++NQVVA+VD
Sbjct 212 RYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD 271
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G ++F ++ K PIGGNI+AHAS RLYLRKG+GE+RICKIYDSP LPE EA+FAI G
Sbjct 272 -GAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADG 330
Query 121 IGDYED 126
+GD +D
Sbjct 331 VGDAKD 336
> mmu:19361 Rad51, AV304093, Rad51a, Reca; RAD51 homolog (S. cerevisiae);
K04482 DNA repair protein RAD51
Length=339
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
R+ALLIVDSAT LYR++++GRGEL++RQMHL RFLR L R+AD +GVAVV++NQVVA+VD
Sbjct 215 RYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD 274
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G ++F ++ K PIGGNI+AHAS RLYLRKG+GE+RICKIYDSP LPE EA+FAI G
Sbjct 275 -GAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADG 333
Query 121 IGDYED 126
+GD +D
Sbjct 334 VGDAKD 339
> xla:380251 rad51-b, MGC130792, MGC52570, brcc5, rad51, rad51a,
reca, xrad51; RAD51 homolog (RecA homolog); K04482 DNA repair
protein RAD51
Length=336
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
R+ALLIVDSAT LYR++++GRGEL++RQMHL RFLR L R+AD +GVAVV++NQVVA+VD
Sbjct 212 RYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD 271
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G ++F ++ K PIGGNI+AHAS RLYLRKG+GE+RICKIYDSP LPE EA+FAI G
Sbjct 272 -GAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADG 330
Query 121 IGDYED 126
+GD +D
Sbjct 331 VGDAKD 336
> hsa:5888 RAD51, BRCC5, HRAD51, HsRad51, HsT16930, RAD51A, RECA;
RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae); K04482
DNA repair protein RAD51
Length=340
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
R+ALLIVDSAT LYR++++GRGEL++RQMHL RFLR L R+AD +GVAVV++NQVVA+VD
Sbjct 216 RYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD 275
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G ++F ++ K PIGGNI+AHAS RLYLRKG+GE+RICKIYDSP LPE EA+FAI G
Sbjct 276 -GAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADG 334
Query 121 IGDYED 126
+GD +D
Sbjct 335 VGDAKD 340
> bbo:BBOV_II003540 18.m06297; Rad51 protein; K04482 DNA repair
protein RAD51
Length=346
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 107/127 (84%), Gaps = 0/127 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RFA+LIVDSAT LYR+++ GRGELA+RQM L ++ R L+R+AD YGVAVVV+NQV+A+VD
Sbjct 218 RFAMLIVDSATALYRTDYTGRGELAARQMSLGKYFRALKRLADIYGVAVVVTNQVMARVD 277
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
N S N+K+P+GG+++A +Q RL+LRK +G SR+CK+Y+SPSLPEGEAVFAI EGG
Sbjct 278 NMSSFMGGNDKVPVGGHVVAQNTQTRLFLRKARGNSRVCKVYNSPSLPEGEAVFAIAEGG 337
Query 121 IGDYEDS 127
I DY+DS
Sbjct 338 IVDYDDS 344
> dre:406487 rad51, wu:fb38e12, zgc:77754; RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae); K04482 DNA repair protein
RAD51
Length=338
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
R+ALLIVDSAT LYR++++GRGEL++RQ HL RFLR L R+AD +GVAVV++NQVVA+VD
Sbjct 214 RYALLIVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVD 273
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G ++F+++ K PIGGNI+AHAS RLYLRKG+GE+RICKIYDSP LPE EA+FAI G
Sbjct 274 -GAAMFSADPKKPIGGNILAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADG 332
Query 121 IGDYED 126
+GD +D
Sbjct 333 VGDAKD 338
> ath:AT5G20850 ATRAD51; ATP binding / DNA binding / DNA-dependent
ATPase/ damaged DNA binding / nucleoside-triphosphatase/
nucleotide binding / protein binding / sequence-specific DNA
binding; K04482 DNA repair protein RAD51
Length=342
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RFALLIVDSAT LYR++F+GRGEL++RQMHL +FLR LQ++AD +GVAVV++NQVVA+VD
Sbjct 218 RFALLIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVD 277
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G +LF + PIGGNIMAHA+ RL LRKG+ E RICK+ SP LPE EA F I G
Sbjct 278 -GSALFAGPQFKPIGGNIMAHATTTRLALRKGRAEERICKVISSPCLPEAEARFQISTEG 336
Query 121 IGDYED 126
+ D +D
Sbjct 337 VTDCKD 342
> cel:Y43C5A.6 rad-51; RADiation sensitivity abnormal/yeast RAD-related
family member (rad-51); K04482 DNA repair protein
RAD51
Length=395
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 96/123 (78%), Gaps = 0/123 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
R+A++IVD AT +R+E+ GRG+LA RQM L FL+CL ++AD YGVAV+++NQVVA+VD
Sbjct 269 RYAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVD 328
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G S+F ++ K PIGG+I+AH S RLYLRKGKGE+R+ K+ SP+LPE EA ++I G
Sbjct 329 GGASMFQADAKKPIGGHIIAHMSTTRLYLRKGKGENRVAKMVQSPNLPEAEATYSITNHG 388
Query 121 IGD 123
I D
Sbjct 389 IED 391
> sce:YER095W RAD51, MUT5; Rad51p; K04482 DNA repair protein RAD51
Length=400
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 99/123 (80%), Gaps = 1/123 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RF+L++VDS LYR++F+GRGEL++RQMHL +F+R LQR+AD +GVAVVV+NQVVA+VD
Sbjct 273 RFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVAQVD 332
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G + FN + K PIGGNIMAH+S RL +KGKG R+CK+ DSP LPE E VFAI E G
Sbjct 333 GGMA-FNPDPKKPIGGNIMAHSSTTRLGFKKGKGCQRLCKVVDSPCLPEAECVFAIYEDG 391
Query 121 IGD 123
+GD
Sbjct 392 VGD 394
> mmu:13404 Dmc1, Dmc1h, MGC151144, Mei11, sgdp; DMC1 dosage suppressor
of mck1 homolog, meiosis-specific homologous recombination
(yeast); K10872 meiotic recombination protein DMC1
Length=340
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 91/126 (72%), Gaps = 3/126 (2%)
Query 2 FALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDN 61
F LLI+DS L+R +F+GRGELA RQ L + L LQ+I++ Y VAV V+NQ+ A D
Sbjct 217 FKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA--DP 274
Query 62 GPSL-FNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G ++ F ++ K PIGG+I+AHAS R+ LRKG+GE RI KIYDSP +PE EA FAI GG
Sbjct 275 GATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAITAGG 334
Query 121 IGDYED 126
IGD ++
Sbjct 335 IGDAKE 340
> hsa:11144 DMC1, DMC1H, HsLim15, LIM15, MGC150472, MGC150473,
dJ199H16.1; DMC1 dosage suppressor of mck1 homolog, meiosis-specific
homologous recombination (yeast); K10872 meiotic recombination
protein DMC1
Length=340
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 91/126 (72%), Gaps = 3/126 (2%)
Query 2 FALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDN 61
F LLI+DS L+R +F+GRGELA RQ L + L LQ+I++ Y VAV V+NQ+ A D
Sbjct 217 FKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA--DP 274
Query 62 GPSL-FNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G ++ F ++ K PIGG+I+AHAS R+ LRKG+GE RI KIYDSP +PE EA FAI GG
Sbjct 275 GATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAITAGG 334
Query 121 IGDYED 126
IGD ++
Sbjct 335 IGDAKE 340
> dre:553953 dmc1, MGC136628, zgc:136628; DMC1 dosage suppressor
of mck1 homolog, meiosis-specific homologous recombination
(yeast); K10872 meiotic recombination protein DMC1
Length=342
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query 2 FALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDN 61
F LLI+DS L+R +F+GRGELA RQ L + L LQ+I++ Y VAV V+NQ+ A
Sbjct 219 FKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGA 278
Query 62 GPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGGI 121
G + F ++ K PIGG+I+AHAS R+ LRKG+ E RI KI+DSP +PE EA FAI GGI
Sbjct 279 GMT-FQADPKKPIGGHILAHASTTRISLRKGRAELRIAKIFDSPHMPENEATFAITAGGI 337
Query 122 GDYED 126
D +D
Sbjct 338 TDAKD 342
> ath:AT3G22880 DMC1; DMC1 (DISRUPTION OF MEIOTIC CONTROL 1);
ATP binding / DNA binding / DNA-dependent ATPase/ damaged DNA
binding / nucleoside-triphosphatase/ nucleotide binding /
protein binding; K10872 meiotic recombination protein DMC1
Length=344
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 88/125 (70%), Gaps = 2/125 (1%)
Query 2 FALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDN 61
F +LIVDS L+R +F GRGELA RQ L + L L +IA+ + VAV ++NQV+A D
Sbjct 222 FRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIA--DP 279
Query 62 GPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGGI 121
G +F S+ K P GG+++AHA+ RL RKGKG++R+CK+YD+P+L E EA F I +GGI
Sbjct 280 GGGMFISDPKKPAGGHVLAHAATIRLLFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGI 339
Query 122 GDYED 126
D +D
Sbjct 340 ADAKD 344
> cpv:cgd7_1690 meiotic recombination protein DMC1-like protein
; K10872 meiotic recombination protein DMC1
Length=342
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 86/126 (68%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
+FALLIVDS L+R+EF+GRGELA RQ L + L L ++AD + +A+V++N V+A
Sbjct 218 KFALLIVDSIIALFRTEFSGRGELAERQQILNKTLSKLNKLADQFNIAIVMTNHVMADPA 277
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G S F N P+GG+++ HAS RL LRKGKGE R+CK+Y SP LPE E V + +GG
Sbjct 278 GGMS-FMPNVAKPVGGHVIGHASHVRLSLRKGKGEQRVCKVYGSPHLPESECVIQLSDGG 336
Query 121 IGDYED 126
I D D
Sbjct 337 IIDPID 342
> pfa:MAL8P1.76 meiotic recombination protein dmc1-like protein;
K10872 meiotic recombination protein DMC1
Length=347
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 90/126 (71%), Gaps = 3/126 (2%)
Query 2 FALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDN 61
FALL+VDS L+R +F+GRGEL+ RQ L + + L ++++ + +A++++NQV++ D
Sbjct 224 FALLVVDSIISLFRVDFSGRGELSERQQKLNKTMSILSKLSEQFNIAILITNQVMS--DP 281
Query 62 GPSL-FNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G ++ F +N P+GG+++ HAS RL LRKGKG+ R+CK+YD+P+LPE E +F + + G
Sbjct 282 GATMTFIANPMKPVGGHVIGHASTIRLSLRKGKGDQRVCKVYDAPNLPEVECIFQLSDKG 341
Query 121 IGDYED 126
+ D D
Sbjct 342 VIDATD 347
> tgo:TGME49_016400 meiotic recombination protein DMC1-like protein,
putative (EC:2.7.11.1); K10872 meiotic recombination
protein DMC1
Length=349
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RF++LIVDS L+R +F+GRGELA RQ L R L + ++A+ Y +AV+++NQV++
Sbjct 225 RFSVLIVDSIIALFRVDFSGRGELADRQQKLNRMLSIMMKLAEQYNLAVMLTNQVMSDPG 284
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
G + F +N P+GG+++ HAS RL +RKGKG+ RI K+YD+P+LPE E + + G
Sbjct 285 GGLT-FTANPTKPVGGHVLGHASTTRLSMRKGKGDQRIVKVYDAPNLPESECIIQLSSRG 343
Query 121 IGD 123
I D
Sbjct 344 IID 346
> tpv:TP04_0170 meiotic recombination protein DMC1; K04482 DNA
repair protein RAD51
Length=346
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
RF LLI+DS L+R +++GRGELA RQ L + L L +IA + VA+V++N V+++
Sbjct 222 RFVLLIIDSIMSLFRVDYSGRGELAERQQRLNKLLSNLLKIAQQFNVAIVLTNHVISE-P 280
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
+G F SN P GGN++ HAS RL LRKGKG RICK+YDSP+LPE E +F + + G
Sbjct 281 SGALSFISNPIKPAGGNVIGHASTCRLSLRKGKGNQRICKVYDSPNLPESECIFELSDSG 340
Query 121 IGDYED 126
I D +
Sbjct 341 IIDVTE 346
> sce:YER179W DMC1, ISC2; Dmc1p; K10872 meiotic recombination
protein DMC1
Length=334
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 4/127 (3%)
Query 2 FALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDN 61
+ L++VDS +R ++ GRGEL+ RQ L + L L R+A+ + VAV ++NQV + D
Sbjct 210 YRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLNRLAEEFNVAVFLTNQV--QSDP 267
Query 62 GPS-LFNSNE-KLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEG 119
G S LF S + + PIGG+++AHAS R+ LRKG+G+ R+ K+ DSP +PE E V+ IGE
Sbjct 268 GASALFASADGRKPIGGHVLAHASATRILLRKGRGDERVAKLQDSPDMPEKECVYVIGEK 327
Query 120 GIGDYED 126
GI D D
Sbjct 328 GITDSSD 334
> dre:541414 xrcc3, im:7142103, si:dkey-11b8.1, zgc:101608; X-ray
repair complementing defective repair in Chinese hamster
cells 3; K10880 DNA-repair protein XRCC3
Length=352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query 4 LLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDNGP 63
LL+VDS L+RSEF E R HL F L R++ TY V+ NQV VD GP
Sbjct 209 LLVVDSVAALFRSEFQA-DEAVQRSRHLLAFSSTLHRLSHTYAAPVLCVNQVTDVVD-GP 266
Query 64 SL------FNSNEKLPIGGNIMAHASQARLYLRK----GKGESRIC-----KIYDSPSLP 108
+ ++ LP G A+ RL LR+ K +SR C ++ +P LP
Sbjct 267 NPGRCDYGLVGSKVLPALGIAWANQVMVRLMLRRLAGQVKSDSRSCAPRKLEVVFAPHLP 326
Query 109 EGEAVFAIGEGGIGDYED 126
+ + E G+ D
Sbjct 327 RSSCLCGVWEEGVRGIPD 344
> dre:450081 rad51c, zgc:101596; rad51 homolog C (S. cerevisiae);
K10870 RAD51-like protein 2
Length=362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query 4 LLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDNGP 63
L+++DS +R +F +L+ R L + L ++A + VAVV++NQ+ +V NG
Sbjct 221 LVVIDSIAFPFRHDFE---DLSQRTRLLNGLAQQLIQLATQHRVAVVLTNQMTTRVSNGQ 277
Query 64 SLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGGIGD 123
S + +P G HA+ RL L +G+ R+ +Y SPS E + I G D
Sbjct 278 S-----KLVPALGESWGHAATQRLILH-WEGQRRLASLYKSPSQMEATVQYQITVQGFRD 331
Query 124 YED 126
D
Sbjct 332 SPD 334
> mmu:114714 Rad51c, R51H3, Rad51l2; RAD51 homolog c (S. cerevisiae);
K10870 RAD51-like protein 2
Length=366
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query 1 RFALLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
+ L+I+D +R + +L+ R L + + +A+ + +AV+++NQ+ K+D
Sbjct 226 KVQLVIIDGIAFPFRHDLE---DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKID 282
Query 61 NGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGG 120
+L +P G HA+ RL + + R +Y SPS E F I G
Sbjct 283 KNQALL-----VPALGESWGHAATIRLIFH-WEQKQRFATLYKSPSQKESTIPFQITPQG 336
Query 121 IGD 123
D
Sbjct 337 FRD 339
> ath:AT2G28560 RAD51B; RAD51B; recombinase; K10869 RAD51-like
protein 1
Length=370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query 4 LLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQV-------- 55
LL++DS T L E A RQ L + L+ +A+ + +VV+NQV
Sbjct 207 LLVIDSMTALLSGE---NKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDET 263
Query 56 -----VAKV-----DNGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSP 105
AKV DN + ++S+ +G N AHA RL L G+ RI K+ SP
Sbjct 264 SQYSFQAKVKDEFKDNTKT-YDSHLVAALGIN-WAHAVTIRLVLEAKSGQ-RIIKVAKSP 320
Query 106 SLPEGEAVFAIGEGGIGDYEDS 127
P F I GI D+
Sbjct 321 MSPPLAFPFHITSAGISLLSDN 342
> ath:AT5G57450 XRCC3; XRCC3; ATP binding / damaged DNA binding
/ protein binding / single-stranded DNA binding; K10880 DNA-repair
protein XRCC3
Length=304
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 33/153 (21%)
Query 2 FALLIVDSATGLYRSEFAGR-GELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVD 60
L+++DS L+RSEF +L R + L+++A + +A+V++NQV V+
Sbjct 147 LKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQLASKFDLAIVITNQVTDLVE 206
Query 61 -----------NGPSLFNSNEK-LPIGGNIMAHASQARLYLRKGKGE------------- 95
N L++S + +P G A+ +R ++ + G
Sbjct 207 TSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFISRSDGSIVKDRSEKDENCS 266
Query 96 -------SRICKIYDSPSLPEGEAVFAIGEGGI 121
R I SP LP F I GI
Sbjct 267 SSVSRSAKRRLDIVFSPYLPGSSCEFMITREGI 299
> ath:AT2G45280 ATRAD51C; ATP binding / damaged DNA binding /
protein binding / recombinase/ single-stranded DNA binding
Length=363
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query 4 LLIVDSATGLYRSEFAGRGELASRQMHLCRFLRCLQRIADTYGVAVVVSNQVVAKVDNG 62
++IVDS T +R ++ +LA R L ++A + +AVV+ NQV K G
Sbjct 242 VVIVDSITFHFRQDY---DDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEG 297
> sce:YDR004W RAD57; Protein that stimulates strand exchange by
stabilizing the binding of Rad51p to single-stranded DNA;
involved in the recombinational repair of double-strand breaks
in DNA during vegetative growth and meiosis; forms heterodimer
with Rad55p; K10958 DNA repair protein RAD57
Length=460
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query 4 LLIVDSATGLYRSEFAGRG--ELASRQMHLCRFLRCLQRIADTYGVAVVVSNQV 55
L+I+DS + R E + E + +L R LQ +A Y ++VVV+NQV
Sbjct 221 LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAHDYSLSVVVANQV 274
> mmu:100048471 killer cell lectin-like receptor 5-like
Length=229
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query 33 RFLRCLQRIADTYGVAVVVSNQVVAKVDNGPSLFNSNEK---LPIGGNIMAHASQARL 87
+FL LQ I+D+Y + + + A +DNGPS + N++ + GG+I S+ RL
Sbjct 153 KFLH-LQVISDSYQIGMKYNKMDWAWIDNGPSKLDLNKRKYNVNYGGHIF--LSKTRL 207
> sce:YLR115W CFT2, YDH1; Cft2p
Length=859
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query 39 QRIADTYGVAVVVSNQVVAKVDNGPSLFNSNEKLPIGGNIMAHASQARLYLRKGKGESR 97
QRI+D+Y VA VV V E LP N AS+++L L+ G SR
Sbjct 738 QRISDSYTVATVVGRLV-------------KESLPQVNNHQKTASRSKLVLKPLHGSSR 783
> ath:AT4G30420 nodulin MtN21 family protein
Length=373
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 0/55 (0%)
Query 35 LRCLQRIADTYGVAVVVSNQVVAKVDNGPSLFNSNEKLPIGGNIMAHASQARLYL 89
LR ++ +A G + V+ + + GP + NS LPI +++ H +L
Sbjct 120 LRDIRGLAKIAGTILCVAGAISMTLLRGPKILNSESALPIAKSVLGHLKDQNTWL 174
> xla:447047 slc7a2.2, CAT-2, CAT2, MGC83504, slc7a2; solute carrier
family 7 (cationic amino acid transporter, y+ system),
member 2, gene 2; K13864 solute carrier family 7 (cationic
amino acid transporter), member 2
Length=622
Score = 29.6 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query 31 LCRFLRCLQRIA----DTYGVAVVVSNQVVAKVDNGPSLFNS 68
LCR L L +A T G V V VAKVD+GPS+ S
Sbjct 30 LCRCLSTLDLVALGVGSTLGAGVYVLAGEVAKVDSGPSIIIS 71
> mmu:625473 Gm6590, EG625473; predicted gene 6590
Length=1418
Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query 33 RFLRCLQRIADTYGVAVVVSNQVVAKVDNGPSLFNSNEK---LPIGGNIMAHASQARL-Y 88
+FL LQ I+D+Y + + + A +DNGPS + N++ + GG+I S+ RL
Sbjct 1342 KFLH-LQVISDSYQIGMKYNKMDWAWIDNGPSKLDLNKRKYNVNYGGHIF--LSKTRLDN 1398
Query 89 LRKGKGESRIC 99
+ G S IC
Sbjct 1399 IDCGNAYSCIC 1409
> ath:AT4G30993 hypothetical protein
Length=285
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query 30 HLCRFLRCLQRIADTYGVAVVVSNQVVAKVD---NGPSLFNSNEKLP 73
H R LR ++++A+TY VVS+ + D + +S+ KLP
Sbjct 59 HQTRLLRLMEKVAETYKAKFVVSSSEQGEEDPFLQNATRLSSSLKLP 105
> xla:495998 ptgr1.1, ltb4dh, pgr1, zadh3; prostaglandin reductase
1, gene 1; K13948 rostaglandin reductase 1 [EC:1.3.1.74
1.3.1.48]
Length=329
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query 67 NSNEKLPIGGNIMAHASQARLYLRKGKGESRICKIYDSPSLPEGEAVFAIGEGGIGDY 124
+ N P+GG +A+A ++ GKG + + +LP A+ A+G G+ Y
Sbjct 75 SKNSAFPVGGYYVAYAGWTTHFISDGKGLDALPSNWPD-NLPRSLALGAVGMPGLTAY 131
Lambda K H
0.320 0.138 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2054672932
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40