bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_2207_orf1
Length=132
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_016860 ATP-dependent RNA helicase, putative ; K1281... 180 1e-45
bbo:BBOV_IV002750 21.m02887; eIF-4A-like DEAD family RNA helic... 174 5e-44
tpv:TP03_0373 ATP-dependent RNA helicase; K12812 ATP-dependent... 167 8e-42
cpv:cgd8_3900 Sub2p like superfamily II helicase involved in s... 159 2e-39
pfa:PFB0445c UAP56, U52; DEAD box helicase, UAP56; K12812 ATP-... 154 6e-38
xla:379310 ddx39a, MGC130793, MGC53693, bat1, bat1l, ddx39, dd... 126 2e-29
xla:447706 ddx39b, MGC81606, bat1, uap56; DEAD (Asp-Glu-Ala-As... 125 4e-29
mmu:53817 Ddx39b, 0610030D10Rik, AI428441, Bat-1, Bat1, Bat1a,... 125 4e-29
hsa:7919 DDX39B, BAT1, D6S81E, UAP56; DEAD (Asp-Glu-Ala-Asp) b... 125 4e-29
dre:406249 ddx39b, ddx39, wu:fc16a02, zgc:55433, zgc:85646; DE... 124 6e-29
dre:393917 bat1, Bat1a, MGC63773, zgc:63773; HLA-B associated ... 124 6e-29
xla:380425 ddx39, MGC53944; nuclear RNA helicase; K13182 ATP-d... 124 6e-29
cel:C26D10.2 hel-1; HELicase family member (hel-1) 123 1e-28
hsa:10212 DDX39A, BAT1, BAT1L, DDX39, DDXL, MGC18203, MGC8417,... 123 2e-28
mmu:68278 Ddx39, 2610307C23Rik, BAT1, DDXL, Ddx39a, URH49; DEA... 123 2e-28
ath:AT5G11200 DEAD/DEAH box helicase, putative 120 1e-27
ath:AT5G11170 ATP binding / ATP-dependent helicase/ helicase/ ... 120 1e-27
sce:YDL084W SUB2; Component of the TREX complex required for n... 111 5e-25
dre:325550 ddx39a, wu:fc87b12, zgc:55881; DEAD (Asp-Glu-Ala-As... 73.9 1e-13
tpv:TP02_0613 ATP-dependent RNA helicase; K12614 ATP-dependent... 72.4 4e-13
bbo:BBOV_II006480 18.m06534; ATP-dependent RNA helicase (EC:3.... 70.5 1e-12
ath:AT4G00660 DEAD/DEAH box helicase, putative 70.1 2e-12
cpv:cgd8_1820 ATP-dependent RNA helicase ; K12614 ATP-dependen... 69.7 2e-12
sce:YDL160C DHH1; Cytoplasmic DExD/H-box helicase, stimulates ... 68.9 4e-12
ath:AT2G45810 DEAD/DEAH box helicase, putative 68.6 5e-12
ath:AT3G61240 DEAD/DEAH box helicase, putative (RH12); K12614 ... 67.0 1e-11
hsa:1974 EIF4A2, BM-010, DDX2B, EIF4A, EIF4F, eIF-4A-II, eIF4A... 64.7 7e-11
dre:386634 eif4a1a, eif4a1, fb49a04, im:7143023, wu:fb20a10, w... 64.3 8e-11
xla:443739 eif4a1, MGC130753, MGC81383, ddx2a, eif-4a, eif4a; ... 63.9 1e-10
xla:444845 MGC86382; translation initiation factor eIF4A II; K... 63.9 1e-10
eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-depende... 63.9 1e-10
cel:F57B9.6 inf-1; INitiation Factor family member (inf-1); K0... 63.5 1e-10
pfa:PFC0915w ATP-dependent RNA Helicase, putative (EC:3.6.1.3)... 63.5 1e-10
eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase; K... 63.2 2e-10
dre:399484 eif4a1b, fb54c08, wu:fb54c08; eukaryotic translatio... 63.2 2e-10
hsa:1973 EIF4A1, DDX2A, EIF-4A, EIF4A, eIF-4A-I, eIF4A-I; euka... 62.0 4e-10
mmu:13681 Eif4a1, BM-010, Ddx2a, Eif4; eukaryotic translation ... 62.0 4e-10
pfa:PF14_0655 H45; helicase 45; K03257 translation initiation ... 60.8 1e-09
xla:399080 ddx6, p54h; DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 60.5 1e-09
cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA he... 60.1 2e-09
sce:YDR021W FAL1; Fal1p (EC:3.6.1.-); K13025 ATP-dependent RNA... 60.1 2e-09
xla:399362 eif4a3, XeIF-4AIII, ddx48, eif4a3-B, eif4aiii, nmp2... 60.1 2e-09
ath:AT1G72730 eukaryotic translation initiation factor 4A, put... 59.7 2e-09
dre:394053 eif4a3, MGC56139, ddx48, eIF4A-III, zgc:56139; euka... 59.7 2e-09
dre:100330671 eukaryotic translation initiation factor 4A-like... 59.7 2e-09
hsa:9775 EIF4A3, DDX48, DKFZp686O16189, KIAA0111, MGC10862, NM... 59.7 3e-09
cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA h... 59.7 3e-09
mmu:100504817 eukaryotic initiation factor 4A-III-like; K13025... 59.3 3e-09
tpv:TP04_0774 DEAD box RNA helicase (EC:3.6.1.-); K13181 ATP-d... 59.3 3e-09
mmu:192170 Eif4a3, 2400003O03Rik, Ddx48, MGC6664, MGC6715, eIF... 59.3 3e-09
> tgo:TGME49_016860 ATP-dependent RNA helicase, putative ; K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]
Length=434
Score = 180 bits (457), Expect = 1e-45, Method: Composition-based stats.
Identities = 89/132 (67%), Positives = 97/132 (73%), Gaps = 29/132 (21%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVD+LCQAKSGMGKTAVFVLSILQQLN+D
Sbjct 50 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDVLCQAKSGMGKTAVFVLSILQQLNLD 109
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
++ G GV+CLG+AHTRELAFQIKNEF+
Sbjct 110 TSGEEG-----------------------------NTQGVVCLGIAHTRELAFQIKNEFD 140
Query 121 RFSKYLKHVKCE 132
RFSKYLK+VKCE
Sbjct 141 RFSKYLKNVKCE 152
> bbo:BBOV_IV002750 21.m02887; eIF-4A-like DEAD family RNA helicase
(EC:3.6.1.3); K12812 ATP-dependent RNA helicase UAP56/SUB2
[EC:3.6.4.13]
Length=472
Score = 174 bits (442), Expect = 5e-44, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 99/132 (75%), Gaps = 15/132 (11%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLKPE+LRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLS+LQQL+V
Sbjct 62 FLKPEILRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSVLQQLDVQ 121
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
G KR GG+ A +AD V CLG++HTRELA+QIKNEF+
Sbjct 122 EDGTLAGG--VKRDAGGE--------AVAPSADR-----VACLGISHTRELAYQIKNEFD 166
Query 121 RFSKYLKHVKCE 132
RFSKY+ V+CE
Sbjct 167 RFSKYMNGVRCE 178
> tpv:TP03_0373 ATP-dependent RNA helicase; K12812 ATP-dependent
RNA helicase UAP56/SUB2 [EC:3.6.4.13]
Length=451
Score = 167 bits (423), Expect = 8e-42, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 94/132 (71%), Gaps = 22/132 (16%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLKPE+LRAI DAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQL+V+
Sbjct 60 FLKPEILRAISDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLDVE 119
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
+ G DA + S C+G++HTRELAFQIKNEF+
Sbjct 120 A-----------EEGKRDAEDNVKPVCRVS-----------CIGISHTRELAFQIKNEFD 157
Query 121 RFSKYLKHVKCE 132
RFSKYL V+CE
Sbjct 158 RFSKYLPQVRCE 169
> cpv:cgd8_3900 Sub2p like superfamily II helicase involved in
snRNP biogenesis ; K12812 ATP-dependent RNA helicase UAP56/SUB2
[EC:3.6.4.13]
Length=430
Score = 159 bits (402), Expect = 2e-39, Method: Composition-based stats.
Identities = 81/130 (62%), Positives = 88/130 (67%), Gaps = 34/130 (26%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLKPEL+RAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLN D
Sbjct 53 FLKPELIRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNPD 112
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
+ V C+ + HTRELAFQ+KNEF+
Sbjct 113 EESK----------------------------------NVECICIGHTRELAFQVKNEFD 138
Query 121 RFSKYLKHVK 130
RFSKYLK+VK
Sbjct 139 RFSKYLKNVK 148
> pfa:PFB0445c UAP56, U52; DEAD box helicase, UAP56; K12812 ATP-dependent
RNA helicase UAP56/SUB2 [EC:3.6.4.13]
Length=457
Score = 154 bits (390), Expect = 6e-38, Method: Composition-based stats.
Identities = 81/132 (61%), Positives = 91/132 (68%), Gaps = 16/132 (12%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLKPELLRAI ++GFEHPSEVQ ETIP AITG DILCQAKSGMGKTAVFVLSILQQL+ +
Sbjct 61 FLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTN 120
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
+ D E + V CLGLAHTRELA+QIKNEF+
Sbjct 121 -----------ENQDMQDTKEMNNDNNNNGDNKF-----VRCLGLAHTRELAYQIKNEFD 164
Query 121 RFSKYLKHVKCE 132
RFSKYLK+V+CE
Sbjct 165 RFSKYLKNVRCE 176
> xla:379310 ddx39a, MGC130793, MGC53693, bat1, bat1l, ddx39,
ddxl, dxd39; DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A
Length=427
Score = 126 bits (316), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 78/130 (60%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLR+I D GFEHPSEVQHE IP AI G+DILCQAKSGMGKTAVFVL+ LQQ+
Sbjct 50 LLKPELLRSIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQI--- 106
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
+A EG + VMC HTRELAFQI E+E
Sbjct 107 -----------------EAVEGQVSVL------------VMC----HTRELAFQISKEYE 133
Query 121 RFSKYLKHVK 130
RFSKY+ VK
Sbjct 134 RFSKYMPTVK 143
> xla:447706 ddx39b, MGC81606, bat1, uap56; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 39B; K12812 ATP-dependent RNA helicase
UAP56/SUB2 [EC:3.6.4.13]
Length=428
Score = 125 bits (314), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/130 (54%), Positives = 75/130 (57%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D GFEHPSEVQHE IP AI G+DILCQAKSGMGKTAVFVL+ LQQL
Sbjct 51 LLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLE-- 108
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
T S VMC HTRELAFQI E+E
Sbjct 109 -----------------------PVTGQVSVL-------VMC----HTRELAFQISKEYE 134
Query 121 RFSKYLKHVK 130
RFSKY+ VK
Sbjct 135 RFSKYMPSVK 144
> mmu:53817 Ddx39b, 0610030D10Rik, AI428441, Bat-1, Bat1, Bat1a,
D17H6S81E, D17H6S81E-1, D6S81Eh, MGC19235, MGC38799; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 39B (EC:3.6.4.13); K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]
Length=428
Score = 125 bits (314), Expect = 4e-29, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 76/130 (58%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D GFEHPSEVQHE IP AI G+D+LCQAKSGMGKTAVFVL+ LQQL
Sbjct 51 LLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLE-- 108
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
T S VMC HTRELAFQI E+E
Sbjct 109 -----------------------PVTGQVSVL-------VMC----HTRELAFQISKEYE 134
Query 121 RFSKYLKHVK 130
RFSKY+ +VK
Sbjct 135 RFSKYMPNVK 144
> hsa:7919 DDX39B, BAT1, D6S81E, UAP56; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 39B (EC:3.6.4.13); K12812 ATP-dependent RNA
helicase UAP56/SUB2 [EC:3.6.4.13]
Length=428
Score = 125 bits (314), Expect = 4e-29, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 76/130 (58%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D GFEHPSEVQHE IP AI G+D+LCQAKSGMGKTAVFVL+ LQQL
Sbjct 51 LLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLE-- 108
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
T S VMC HTRELAFQI E+E
Sbjct 109 -----------------------PVTGQVSVL-------VMC----HTRELAFQISKEYE 134
Query 121 RFSKYLKHVK 130
RFSKY+ +VK
Sbjct 135 RFSKYMPNVK 144
> dre:406249 ddx39b, ddx39, wu:fc16a02, zgc:55433, zgc:85646;
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b (EC:3.6.4.13); K13182
ATP-dependent RNA helicase DDX39 [EC:3.6.4.13]
Length=427
Score = 124 bits (312), Expect = 6e-29, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 74/130 (56%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D GFEHPSEVQHE IP AI G+DILCQAKSGMGKTAVFVL+ LQQ+
Sbjct 50 LLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQI--- 106
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
D VMC HTRELAFQI E+E
Sbjct 107 -----------------------------EPVDGQVSVLVMC----HTRELAFQISKEYE 133
Query 121 RFSKYLKHVK 130
RFSKY+ VK
Sbjct 134 RFSKYMPTVK 143
> dre:393917 bat1, Bat1a, MGC63773, zgc:63773; HLA-B associated
transcript 1 (EC:3.6.1.-); K12812 ATP-dependent RNA helicase
UAP56/SUB2 [EC:3.6.4.13]
Length=435
Score = 124 bits (312), Expect = 6e-29, Method: Composition-based stats.
Identities = 70/130 (53%), Positives = 75/130 (57%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D GFEHPSEVQHE IP AI G+D+LCQAKSGMGKTAVFVL+ LQQL
Sbjct 58 LLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLE-- 115
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
T S VMC HTRELAFQI E+E
Sbjct 116 -----------------------PVTGQVSVL-------VMC----HTRELAFQISKEYE 141
Query 121 RFSKYLKHVK 130
RFSKY+ VK
Sbjct 142 RFSKYMPSVK 151
> xla:380425 ddx39, MGC53944; nuclear RNA helicase; K13182 ATP-dependent
RNA helicase DDX39 [EC:3.6.4.13]
Length=427
Score = 124 bits (312), Expect = 6e-29, Method: Composition-based stats.
Identities = 69/130 (53%), Positives = 78/130 (60%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLR+I D GFEHPSEVQHE IP AI G+DILCQAKSGMGKTAVFVL+ LQQ+
Sbjct 50 LLKPELLRSIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQI--- 106
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
+A EG + VMC HTRELAFQI E+E
Sbjct 107 -----------------EAVEGQVSVL------------VMC----HTRELAFQISKEYE 133
Query 121 RFSKYLKHVK 130
RFSKY+ V+
Sbjct 134 RFSKYMPTVE 143
> cel:C26D10.2 hel-1; HELicase family member (hel-1)
Length=425
Score = 123 bits (309), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 78/131 (59%), Gaps = 38/131 (29%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLN-V 59
LKPE+LRAIGD GFEHPSEVQHE IP AI G+D++CQAKSGMGKTAVFV++ LQQL V
Sbjct 47 LLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPV 106
Query 60 DSAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEF 119
D + V+C + HTRELAFQI E+
Sbjct 107 DGEVS-----------------------------------VVC--MCHTRELAFQISKEY 129
Query 120 ERFSKYLKHVK 130
ERFSKYL VK
Sbjct 130 ERFSKYLPGVK 140
> hsa:10212 DDX39A, BAT1, BAT1L, DDX39, DDXL, MGC18203, MGC8417,
URH49; DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (EC:3.6.4.13);
K13182 ATP-dependent RNA helicase DDX39 [EC:3.6.4.13]
Length=470
Score = 123 bits (308), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/130 (51%), Positives = 74/130 (56%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D GFEHPSEVQHE IP AI G+D+LCQAKSGMGKTAVFVL+ LQQ+
Sbjct 93 LLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQI--- 149
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
+ VMC HTRELAFQI E+E
Sbjct 150 -----------------------------EPVNGQVTVLVMC----HTRELAFQISKEYE 176
Query 121 RFSKYLKHVK 130
RFSKY+ VK
Sbjct 177 RFSKYMPSVK 186
> mmu:68278 Ddx39, 2610307C23Rik, BAT1, DDXL, Ddx39a, URH49; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 39 (EC:3.6.4.13); K13182
ATP-dependent RNA helicase DDX39 [EC:3.6.4.13]
Length=427
Score = 123 bits (308), Expect = 2e-28, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 76/130 (58%), Gaps = 36/130 (27%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D GFEHPSEVQHE IP AI G+D+LCQAKSGMGKTAVFVL+ LQQ+
Sbjct 50 LLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQI--- 106
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
+ G + VMC HTRELAFQI E+E
Sbjct 107 -----------------EPVNGQVSVL------------VMC----HTRELAFQISKEYE 133
Query 121 RFSKYLKHVK 130
RFSKY+ VK
Sbjct 134 RFSKYMPSVK 143
> ath:AT5G11200 DEAD/DEAH box helicase, putative
Length=486
Score = 120 bits (301), Expect = 1e-27, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 74/131 (56%), Gaps = 38/131 (29%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D+GFEHPSEVQHE IP AI G+D++CQAKSGMGKTAVFVLS LQQ+
Sbjct 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI--- 108
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPG-VMCLGLAHTRELAFQIKNEF 119
PG V L L HTRELA+QI NEF
Sbjct 109 ----------------------------------EPSPGQVSALVLCHTRELAYQICNEF 134
Query 120 ERFSKYLKHVK 130
RFS YL K
Sbjct 135 VRFSTYLPDTK 145
> ath:AT5G11170 ATP binding / ATP-dependent helicase/ helicase/
nucleic acid binding
Length=427
Score = 120 bits (301), Expect = 1e-27, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 74/131 (56%), Gaps = 38/131 (29%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPELLRAI D+GFEHPSEVQHE IP AI G+D++CQAKSGMGKTAVFVLS LQQ+
Sbjct 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI--- 108
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPG-VMCLGLAHTRELAFQIKNEF 119
PG V L L HTRELA+QI NEF
Sbjct 109 ----------------------------------EPSPGQVSALVLCHTRELAYQICNEF 134
Query 120 ERFSKYLKHVK 130
RFS YL K
Sbjct 135 VRFSTYLPDTK 145
> sce:YDL084W SUB2; Component of the TREX complex required for
nuclear mRNA export; member of the DEAD-box RNA helicase superfamily
and is involved in early and late steps of spliceosome
assembly; homolog of the human splicing factor hUAP56 (EC:3.6.1.-);
K12812 ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]
Length=446
Score = 111 bits (278), Expect = 5e-25, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 74/131 (56%), Gaps = 38/131 (29%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LKPEL RAI D GFEHPSEVQ TIP +I G D+LCQAKSG+GKTAVFVLS LQQL+
Sbjct 68 LLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLD-- 125
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPG-VMCLGLAHTRELAFQIKNEF 119
VPG V + + + RELA+QI+NE+
Sbjct 126 -----------------------------------PVPGEVAVVVICNARELAYQIRNEY 150
Query 120 ERFSKYLKHVK 130
RFSKY+ VK
Sbjct 151 LRFSKYMPDVK 161
> dre:325550 ddx39a, wu:fc87b12, zgc:55881; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 39a
Length=346
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 49/99 (49%), Gaps = 36/99 (36%)
Query 33 VDILCQAKSGMGKTAVFVLSILQQLNVDSAAAAGAGAATKRAGGGDAAEGTSATAATSAA 92
+DILCQAKSGMGKTAVFVL+ LQQ+
Sbjct 1 MDILCQAKSGMGKTAVFVLATLQQI--------------------------------EPV 28
Query 93 DSSAVPGVMCLGLAHTRELAFQIKNEFERFSKYLKHVKC 131
D VMC HTRELAFQI E+ERFSKY+ VKC
Sbjct 29 DGQVSVLVMC----HTRELAFQISKEYERFSKYMSSVKC 63
> tpv:TP02_0613 ATP-dependent RNA helicase; K12614 ATP-dependent
RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=417
Score = 72.4 bits (176), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 0/66 (0%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLK ELL I + GFE PS +Q E+IP A+ G DIL +AK+G GKTA FV+ +LQ+L+
Sbjct 50 FLKRELLMGIFEKGFERPSPIQEESIPIALAGHDILARAKNGTGKTAAFVIPLLQKLDTS 109
Query 61 SAAAAG 66
A G
Sbjct 110 EAQIQG 115
> bbo:BBOV_II006480 18.m06534; ATP-dependent RNA helicase (EC:3.6.1.3);
K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=433
Score = 70.5 bits (171), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 0/66 (0%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLK ELL I + GFE PS +Q E+IP A+ G DIL +AK+G GKTA FV+ +L++LN
Sbjct 66 FLKRELLMGIFEKGFEKPSPIQEESIPVALAGHDILARAKNGTGKTAAFVIPLLEKLNTS 125
Query 61 SAAAAG 66
+ G
Sbjct 126 NNHIQG 131
> ath:AT4G00660 DEAD/DEAH box helicase, putative
Length=505
Score = 70.1 bits (170), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 0/61 (0%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLK ELL I + GFE PS +Q E+IP A+TG DIL +AK+G GKTA F + +L++++ D
Sbjct 137 FLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQD 196
Query 61 S 61
+
Sbjct 197 N 197
> cpv:cgd8_1820 ATP-dependent RNA helicase ; K12614 ATP-dependent
RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=406
Score = 69.7 bits (169), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 0/58 (0%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLN 58
FLK ELL I + GFE PS +Q E+IP A+ G DIL +AK+G GKTA FV+ +L+++N
Sbjct 39 FLKRELLMGIYEKGFERPSPIQEESIPVALAGKDILARAKNGTGKTAAFVIPLLEKIN 96
> sce:YDL160C DHH1; Cytoplasmic DExD/H-box helicase, stimulates
mRNA decapping, coordinates distinct steps in mRNA function
and decay, interacts with both the decapping and deadenylase
complexes, may have a role in mRNA export and translation
(EC:3.6.1.-); K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=506
Score = 68.9 bits (167), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 0/57 (0%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQL 57
+LK ELL I +AGFE PS +Q E IP AITG DIL +AK+G GKTA FV+ L+++
Sbjct 52 YLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKV 108
> ath:AT2G45810 DEAD/DEAH box helicase, putative
Length=528
Score = 68.6 bits (166), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 36/127 (28%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
FLK +LLR I + GFE PS +Q E+IP A+TG DIL +AK+G GKT F + L++++
Sbjct 160 FLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKID-- 217
Query 61 SAAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFE 120
+++ + V+ L TRELA Q +
Sbjct 218 -------------------------------PENNVIQAVI---LVPTRELALQTSQVCK 243
Query 121 RFSKYLK 127
SKYLK
Sbjct 244 ELSKYLK 250
> ath:AT3G61240 DEAD/DEAH box helicase, putative (RH12); K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=498
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 0/58 (0%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLN 58
FLK +LL+ I + GFE PS +Q E+IP A+TG DIL +AK+G GKT F + +L++++
Sbjct 130 FLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKID 187
> hsa:1974 EIF4A2, BM-010, DDX2B, EIF4A, EIF4F, eIF-4A-II, eIF4A-II;
eukaryotic translation initiation factor 4A2 (EC:3.6.4.13);
K03257 translation initiation factor 4A
Length=407
Score = 64.7 bits (156), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 0/59 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
LK LLR I GFE PS +Q I I G D++ QA+SG GKTA F +SILQQL ++
Sbjct 40 LKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIE 98
> dre:386634 eif4a1a, eif4a1, fb49a04, im:7143023, wu:fb20a10,
wu:fb49a04, wu:fc76a02, wu:fc96c01, wu:fd15g03; eukaryotic
translation initiation factor 4A, isoform 1A; K03257 translation
initiation factor 4A
Length=406
Score = 64.3 bits (155), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 0/72 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
L+ LLR I GFE PS +Q I I G D++ QA+SG GKTA F +SILQQ++V+
Sbjct 39 LREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDVEL 98
Query 62 AAAAGAGAATKR 73
A A R
Sbjct 99 KATQAMVLAPTR 110
> xla:443739 eif4a1, MGC130753, MGC81383, ddx2a, eif-4a, eif4a;
eukaryotic translation initiation factor 4A1; K03257 translation
initiation factor 4A
Length=406
Score = 63.9 bits (154), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 0/72 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
L LLR I GFE PS +Q I I G D++ QA+SG GKTA F +SILQQ+ +D
Sbjct 39 LSESLLRGIYAYGFEKPSAIQQRAIMPCIKGYDVIAQAQSGTGKTATFAISILQQIELDM 98
Query 62 AAAAGAGAATKR 73
A A R
Sbjct 99 KATQALVLAPTR 110
> xla:444845 MGC86382; translation initiation factor eIF4A II;
K03257 translation initiation factor 4A
Length=406
Score = 63.9 bits (154), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 0/72 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
L LLR I GFE PS +Q I I G D++ QA+SG GKTA F +SILQQ+ +D
Sbjct 39 LSESLLRGIYAYGFEKPSAIQQRAIMPCIKGYDVIAQAQSGTGKTATFAISILQQIELDM 98
Query 62 AAAAGAGAATKR 73
A A R
Sbjct 99 KATQALVLAPTR 110
> eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-dependent
RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Length=629
Score = 63.9 bits (154), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 36/128 (28%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
LK +L A+ D G+E PS +Q E IPH + G D+L A++G GKTA F L +LQ L+ +
Sbjct 13 LKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPEL 72
Query 62 AAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFER 121
A P ++ LA TRELA Q+
Sbjct 73 KA----------------------------------PQILV--LAPTRELAVQVAEAMTD 96
Query 122 FSKYLKHV 129
FSK+++ V
Sbjct 97 FSKHMRGV 104
> cel:F57B9.6 inf-1; INitiation Factor family member (inf-1);
K03257 translation initiation factor 4A
Length=402
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 55/125 (44%), Gaps = 36/125 (28%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
LK ELLR I GFE PS +Q I TG D++ QA+SG GKTA F +SILQ+++ +
Sbjct 36 LKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHED 95
Query 62 AAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFER 121
P V L +A TRELA QI+
Sbjct 96 ------------------------------------PHVQALVMAPTRELAQQIQKVMSA 119
Query 122 FSKYL 126
+YL
Sbjct 120 LGEYL 124
> pfa:PFC0915w ATP-dependent RNA Helicase, putative (EC:3.6.1.3);
K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=433
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 0/58 (0%)
Query 1 FLKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLN 58
FLK ELL I + G+E PS +Q E+IP A+ G +IL +AK+G GKTA F + +L++ N
Sbjct 66 FLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLEKCN 123
> eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase;
K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Length=454
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 30/125 (24%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
L P++LRA+ + G+ P+ +Q + IP + G D++ A++G GKTA F L +LQ L
Sbjct 8 LSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQ 67
Query 62 AAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFER 121
A G +R V L L TRELA QI
Sbjct 68 PHAKG-----RRP-------------------------VRALILTPTRELAAQIGENVRD 97
Query 122 FSKYL 126
+SKYL
Sbjct 98 YSKYL 102
> dre:399484 eif4a1b, fb54c08, wu:fb54c08; eukaryotic translation
initiation factor 4A, isoform 1B; K03257 translation initiation
factor 4A
Length=406
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 0/59 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVD 60
L+ LLR I GFE PS +Q I I G D++ QA+SG GKTA F +SILQQ++++
Sbjct 39 LRETLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIE 97
> hsa:1973 EIF4A1, DDX2A, EIF-4A, EIF4A, eIF-4A-I, eIF4A-I; eukaryotic
translation initiation factor 4A1 (EC:3.6.4.13); K03257
translation initiation factor 4A
Length=347
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 0/72 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
L LLR I GFE PS +Q I I G D++ QA+SG GKTA F +SILQQ+ +D
Sbjct 39 LSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDL 98
Query 62 AAAAGAGAATKR 73
A A R
Sbjct 99 KATQALVLAPTR 110
> mmu:13681 Eif4a1, BM-010, Ddx2a, Eif4; eukaryotic translation
initiation factor 4A1 (EC:3.6.4.13); K03257 translation initiation
factor 4A
Length=364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 0/72 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
L LLR I GFE PS +Q I I G D++ QA+SG GKTA F +SILQQ+ +D
Sbjct 39 LSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDL 98
Query 62 AAAAGAGAATKR 73
A A R
Sbjct 99 KATQALVLAPTR 110
> pfa:PF14_0655 H45; helicase 45; K03257 translation initiation
factor 4A
Length=398
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 54/130 (41%), Gaps = 37/130 (28%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDS 61
L +LLR I GFE PS +Q I + G D + QA+SG GKTA FV+S LQ +N D
Sbjct 30 LNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFVISSLQLINYDY 89
Query 62 AAAAGAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFER 121
A L LA TRELA QI+
Sbjct 90 VACQA------------------------------------LILAPTRELAQQIQKVVLA 113
Query 122 FSKYLKHVKC 131
YLK VKC
Sbjct 114 LGDYLK-VKC 122
> xla:399080 ddx6, p54h; DEAD (Asp-Glu-Ala-Asp) box polypeptide
6 (EC:3.6.4.13); K12614 ATP-dependent RNA helicase DDX6/DHH1
[EC:3.6.4.13]
Length=481
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
LK ELL I + G+E PS +Q E+IP A++G DIL +AK+G GKT +++ +L++L++
Sbjct 102 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKTGAYLIPLLERLDL 159
> cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 0/57 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLN 58
L+ +LLR I GFE PS +Q IP + D++ QA+SG GKTA F +S+LQ L+
Sbjct 33 LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLD 89
> sce:YDR021W FAL1; Fal1p (EC:3.6.1.-); K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
LK +LLR I GFE PS +Q I I+G D++ QA+SG GKTA F + +LQ +++
Sbjct 30 LKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDL 87
> xla:399362 eif4a3, XeIF-4AIII, ddx48, eif4a3-B, eif4aiii, nmp265,
nuk34; eukaryotic translation initiation factor 4A3 (EC:3.6.4.13);
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=414
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
L+ +LLR I GFE PS +Q + I I G D++ Q++SG GKTA F +S+LQ L++
Sbjct 48 LREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDI 105
> ath:AT1G72730 eukaryotic translation initiation factor 4A, putative
/ eIF-4A, putative; K03257 translation initiation factor
4A
Length=414
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
L+P+LLR I GFE PS +Q I G+D++ QA+SG GKTA F +LQQL++
Sbjct 48 LQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDI 105
> dre:394053 eif4a3, MGC56139, ddx48, eIF4A-III, zgc:56139; eukaryotic
translation initiation factor 4A, isoform 3 (EC:3.6.4.13);
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=406
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
L+ +LLR I GFE PS +Q I I G D++ Q++SG GKTA F +S+LQ L++
Sbjct 40 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDI 97
> dre:100330671 eukaryotic translation initiation factor 4A-like;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=406
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
L+ +LLR I GFE PS +Q I I G D++ Q++SG GKTA F +S+LQ L++
Sbjct 40 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDI 97
> hsa:9775 EIF4A3, DDX48, DKFZp686O16189, KIAA0111, MGC10862,
NMP265, NUK34, eIF4AIII; eukaryotic translation initiation factor
4A3 (EC:3.6.4.13); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
L+ +LLR I GFE PS +Q I I G D++ Q++SG GKTA F +S+LQ L++
Sbjct 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102
> cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 0/57 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLN 58
L+ +LLR I GFE PS +Q +P + D++ QA+SG GKTA F +S+LQ L+
Sbjct 33 LREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLD 89
> mmu:100504817 eukaryotic initiation factor 4A-III-like; K13025
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=278
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
L+ +LLR I GFE PS +Q I I G D++ Q++SG GKTA F +S+LQ L++
Sbjct 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI 102
> tpv:TP04_0774 DEAD box RNA helicase (EC:3.6.1.-); K13181 ATP-dependent
RNA helicase DDX27 [EC:3.6.4.13]
Length=543
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query 6 LLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNVDSAAAA 65
+LRAI + G+++P+ +Q + IP A+ G D+L A++G GKTA F++ LQ+L V
Sbjct 86 ILRAISEMGYQNPTIIQSKVIPLALEGKDLLVTAETGSGKTASFLIPTLQRLVV------ 139
Query 66 GAGAATKRAGGGDAAEGTSATAATSAADSSAVPGVMCLGLAHTRELAFQIKNEFERFSKY 125
G ++ G L + TRELA Q N F+ SKY
Sbjct 140 ---------------SGVLKQLTNEKQVQNSRFGTKALVILPTRELAAQCFNVFKLLSKY 184
Query 126 L 126
L
Sbjct 185 L 185
> mmu:192170 Eif4a3, 2400003O03Rik, Ddx48, MGC6664, MGC6715, eIF4A-III,
mKIAA0111; eukaryotic translation initiation factor
4A3 (EC:3.6.4.13); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 0/58 (0%)
Query 2 LKPELLRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNV 59
L+ +LLR I GFE PS +Q I I G D++ Q++SG GKTA F +S+LQ L++
Sbjct 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDI 102
Lambda K H
0.316 0.130 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2099897216
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40