bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
           164,496 sequences; 82,071,388 total letters



Query=  Emax_2106_orf3
Length=61
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  eco:b3985  rplJ, ECK3976, JW3948; 50S ribosomal subunit protein...  75.9    3e-14


> eco:b3985  rplJ, ECK3976, JW3948; 50S ribosomal subunit protein 
L10; K02864 large subunit ribosomal protein L10
Length=165

 Score = 75.9 bits (185),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 47/55 (85%), Gaps = 0/55 (0%)

Query  7   VAINLEDKKAIVAEDNEAAKAALSAVVADARGVTVGAMTGLRKEAREAGVYVRVV  61
           +A+NL+DK+AIVAE +E AK ALSAVVAD+RGVTV  MT LRK  REAGVY+RVV
Sbjct  1   MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVV  55



Lambda     K      H
   0.312    0.126    0.323 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 2064920148


  Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
    Posted date:  Sep 17, 2011 11:19 AM
  Number of letters in database: 82,071,388
  Number of sequences in database:  164,496



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40