bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_1707_orf1
Length=89
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_050770 eukaryotic translation initiation factor 4A ... 149 3e-36
cpv:cgd1_880 eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 138 4e-33
tpv:TP02_0123 RNA helicase-1; K03257 translation initiation fa... 136 1e-32
pfa:PF14_0655 H45; helicase 45; K03257 translation initiation ... 134 5e-32
bbo:BBOV_III010250 17.m07889; eukaryotic translation initiatio... 133 2e-31
cel:F57B9.6 inf-1; INitiation Factor family member (inf-1); K0... 123 1e-28
ath:AT3G13920 EIF4A1; EIF4A1 (EUKARYOTIC TRANSLATION INITIATIO... 122 3e-28
dre:406760 eif4a2, wu:fd50g11, zgc:63783; eukaryotic translati... 122 3e-28
ath:AT1G72730 eukaryotic translation initiation factor 4A, put... 121 5e-28
xla:443739 eif4a1, MGC130753, MGC81383, ddx2a, eif-4a, eif4a; ... 119 2e-27
ath:AT1G54270 EIF4A-2; ATP-dependent helicase/ translation ini... 119 3e-27
hsa:1973 EIF4A1, DDX2A, EIF-4A, EIF4A, eIF-4A-I, eIF4A-I; euka... 117 8e-27
dre:386634 eif4a1a, eif4a1, fb49a04, im:7143023, wu:fb20a10, w... 117 9e-27
xla:379831 eif4a2, MGC52799, ddx2b, eif4f; eukaryotic translat... 117 1e-26
xla:444845 MGC86382; translation initiation factor eIF4A II; K... 116 2e-26
mmu:13682 Eif4a2, 4833432N07Rik, BM-010, Ddx2b, Eif4; eukaryot... 116 2e-26
dre:399484 eif4a1b, fb54c08, wu:fb54c08; eukaryotic translatio... 115 3e-26
mmu:13681 Eif4a1, BM-010, Ddx2a, Eif4; eukaryotic translation ... 115 3e-26
hsa:1974 EIF4A2, BM-010, DDX2B, EIF4A, EIF4F, eIF-4A-II, eIF4A... 114 8e-26
ath:AT3G19760 eukaryotic translation initiation factor 4A, put... 114 1e-25
sce:YKR059W TIF1; Tif1p (EC:3.6.1.-); K03257 translation initi... 113 2e-25
sce:YJL138C TIF2; Tif2p (EC:3.6.1.-); K03257 translation initi... 113 2e-25
tgo:TGME49_056770 ATP-dependent helicase, putative (EC:3.4.22.... 107 7e-24
cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA he... 107 1e-23
cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA h... 107 1e-23
dre:394053 eif4a3, MGC56139, ddx48, eIF4A-III, zgc:56139; euka... 107 1e-23
hsa:9775 EIF4A3, DDX48, DKFZp686O16189, KIAA0111, MGC10862, NM... 107 1e-23
tpv:TP01_0765 eukaryotic translation initiation factor 4A; K13... 107 1e-23
mmu:192170 Eif4a3, 2400003O03Rik, Ddx48, MGC6664, MGC6715, eIF... 106 1e-23
dre:100330671 eukaryotic translation initiation factor 4A-like... 106 1e-23
xla:399362 eif4a3, XeIF-4AIII, ddx48, eif4a3-B, eif4aiii, nmp2... 106 1e-23
bbo:BBOV_IV010990 23.m06251; eukaryotic initiation factor 4A-3... 106 2e-23
mmu:668137 Gm8994, B020013A22Rik, EG668137; predicted gene 899... 104 5e-23
pfa:PFD1070w eukaryotic initiation factor, putative; K13025 AT... 104 8e-23
mmu:434050 Gm5576, EG434050; predicted pseudogene 5576; K13025... 103 2e-22
ath:AT1G51380 eukaryotic translation initiation factor 4A, put... 102 2e-22
cel:F57B9.3 hypothetical protein; K03257 translation initiatio... 96.3 2e-20
cpv:cgd7_3940 eIF4A-1; eukaryotic translation initiation facto... 91.3 7e-19
sce:YDR021W FAL1; Fal1p (EC:3.6.1.-); K13025 ATP-dependent RNA... 90.5 1e-18
ath:AT5G26742 emb1138 (embryo defective 1138); ATP binding / A... 78.2 6e-15
eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-depende... 75.1 5e-14
mmu:67997 Ddx59, 1210002B07Rik, 4833411G06Rik; DEAD (Asp-Glu-A... 75.1 5e-14
ath:AT3G22330 PMH2; PMH2 (putative mitochondrial RNA helicase ... 74.7 7e-14
ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putat... 74.3 9e-14
ath:AT3G22310 PMH1; PMH1 (PUTATIVE MITOCHONDRIAL RNA HELICASE ... 74.3 1e-13
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 73.9 1e-13
ath:AT4G33370 DEAD-box protein abstrakt, putative 73.2 2e-13
hsa:83479 DDX59, DKFZp564B1023, ZNHIT5; DEAD (Asp-Glu-Ala-Asp)... 72.0 4e-13
bbo:BBOV_III000190 17.m07043; p68 RNA helicase protein 71.6 5e-13
ath:AT3G02065 DEAD/DEAH box helicase family protein 71.6 6e-13
> tgo:TGME49_050770 eukaryotic translation initiation factor 4A
(EC:3.4.22.44)
Length=412
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 78/88 (88%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH+VVGTPGRV+DMMEKRHLR D M LF++DEADEMLSRGFK+QI VF+ LP DVQVA
Sbjct 157 GVHMVVGTPGRVHDMMEKRHLRVDDMKLFIMDEADEMLSRGFKSQIYDVFKKLPPDVQVA 216
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
LFSATMP DILELTT+FMR PKRILVK
Sbjct 217 LFSATMPQDILELTTKFMRDPKRILVKN 244
> cpv:cgd1_880 eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length=405
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/88 (75%), Positives = 77/88 (87%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH+VVGTPGRV DM++K +LR D++ LF+LDEADEMLSRGFK QI +F+ LPQDVQVA
Sbjct 149 GVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFKKLPQDVQVA 208
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
LFSATMP +IL LTTQFMR PKRILVK+
Sbjct 209 LFSATMPNEILHLTTQFMRDPKRILVKQ 236
> tpv:TP02_0123 RNA helicase-1; K03257 translation initiation
factor 4A
Length=400
Score = 136 bits (343), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/88 (76%), Positives = 75/88 (85%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH+VVGTPGRV DM+EK+ L D M LF+LDEADEMLSRGFK QI VF+ LP D+QVA
Sbjct 146 GVHMVVGTPGRVYDMIEKKALLTDKMKLFILDEADEMLSRGFKGQIQDVFKRLPPDIQVA 205
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
LFSATMP +ILELTT+FMR PKRILVKK
Sbjct 206 LFSATMPNEILELTTKFMRSPKRILVKK 233
> pfa:PF14_0655 H45; helicase 45; K03257 translation initiation
factor 4A
Length=398
Score = 134 bits (338), Expect = 5e-32, Method: Composition-based stats.
Identities = 66/88 (75%), Positives = 75/88 (85%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH+VVGTPGRV DM++KRHL D + LF+LDEADEMLSRGFKAQI VF+ L D+QVA
Sbjct 141 GVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQVA 200
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
LFSATMP +ILELTT+FMR PK ILVKK
Sbjct 201 LFSATMPQEILELTTRFMRDPKTILVKK 228
> bbo:BBOV_III010250 17.m07889; eukaryotic translation initiation
factor 4A; K03257 translation initiation factor 4A
Length=402
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 75/88 (85%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH+VVGTPGRV DM++K+ L + + LF+LDEADEMLSRGFK QI VF+ +P DVQVA
Sbjct 147 GVHMVVGTPGRVYDMIDKKALLTNKIKLFILDEADEMLSRGFKGQIHEVFRRMPPDVQVA 206
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
LFSATMP +ILELTT+FMR PKRILVKK
Sbjct 207 LFSATMPNEILELTTKFMRSPKRILVKK 234
> cel:F57B9.6 inf-1; INitiation Factor family member (inf-1);
K03257 translation initiation factor 4A
Length=402
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 70/88 (79%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G+HVVVGTPGRV DM+ + L + +FVLDEADEMLSRGFK QI VF+ +PQDVQV
Sbjct 147 GIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVV 206
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SATMP+++L++T +FMR P RILVKK
Sbjct 207 LLSATMPSEVLDVTNRFMRNPIRILVKK 234
> ath:AT3G13920 EIF4A1; EIF4A1 (EUKARYOTIC TRANSLATION INITIATION
FACTOR 4A1); ATP-dependent helicase/ translation initiation
factor
Length=415
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 72/88 (81%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVHVVVGTPGRV DM++++ LR D++ +FVLDEADEMLSRGFK QI +FQ LP +QV
Sbjct 157 GVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
+FSATMP + LE+T +FM KP RILVK+
Sbjct 217 VFSATMPPEALEITRKFMSKPVRILVKR 244
> dre:406760 eif4a2, wu:fd50g11, zgc:63783; eukaryotic translation
initiation factor 4A, isoform 2 (EC:3.6.1.-); K03257 translation
initiation factor 4A
Length=280
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 70/86 (81%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H+VVGTPGRV DM+ +R+L + +FVLDEADEMLSRGFK QI +FQ L ++QV L
Sbjct 27 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLL 86
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMPAD+LE+TT+FMR+P RILVKK
Sbjct 87 SATMPADVLEVTTKFMREPVRILVKK 112
> ath:AT1G72730 eukaryotic translation initiation factor 4A, putative
/ eIF-4A, putative; K03257 translation initiation factor
4A
Length=414
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 70/88 (79%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVHVVVGTPGRV D++ ++ LR D + +FVLDEADEMLSRGFK QI +FQ LP VQV
Sbjct 159 GVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVG 218
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
+FSATMP + LE+T +FM KP RILVK+
Sbjct 219 VFSATMPPEALEITRKFMNKPVRILVKR 246
> xla:443739 eif4a1, MGC130753, MGC81383, ddx2a, eif-4a, eif4a;
eukaryotic translation initiation factor 4A1; K03257 translation
initiation factor 4A
Length=406
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H+VVGTPGRV DM+ +R+L ++ +FVLDEADEMLSRGFK QI +FQ L + QV L
Sbjct 153 HIVVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLSSNAQVVLL 212
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMPAD+LE+T +FMR P RILVKK
Sbjct 213 SATMPADVLEVTKKFMRDPIRILVKK 238
> ath:AT1G54270 EIF4A-2; ATP-dependent helicase/ translation initiation
factor; K03257 translation initiation factor 4A
Length=412
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 70/88 (79%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVHVVVGTPGRV DM+ ++ LR D + +FVLDEADEMLSRGFK QI +FQ LP +QV
Sbjct 157 GVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
+FSATMP + LE+T +FM KP RILVK+
Sbjct 217 VFSATMPPEALEITRKFMSKPVRILVKR 244
> hsa:1973 EIF4A1, DDX2A, EIF-4A, EIF4A, eIF-4A-I, eIF4A-I; eukaryotic
translation initiation factor 4A1 (EC:3.6.4.13); K03257
translation initiation factor 4A
Length=347
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 68/86 (79%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H++VGTPGRV DM+ +R+L ++ +FVLDEADEMLSRGFK QI +FQ L + QV L
Sbjct 153 HIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLL 212
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP+D+LE+T +FMR P RILVKK
Sbjct 213 SATMPSDVLEVTKKFMRDPIRILVKK 238
> dre:386634 eif4a1a, eif4a1, fb49a04, im:7143023, wu:fb20a10,
wu:fb49a04, wu:fc76a02, wu:fc96c01, wu:fd15g03; eukaryotic
translation initiation factor 4A, isoform 1A; K03257 translation
initiation factor 4A
Length=406
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H+VVGTPGRV DM+ +R+L ++ +F LDEADEMLSRGFK QI +FQ L D QV L
Sbjct 153 HIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLATDTQVILL 212
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP ++LE+TT+FMR P RILVKK
Sbjct 213 SATMPQEVLEVTTKFMRDPVRILVKK 238
> xla:379831 eif4a2, MGC52799, ddx2b, eif4f; eukaryotic translation
initiation factor 4A2 (EC:3.6.1.-); K03257 translation
initiation factor 4A
Length=263
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H+VVGTPGRV DM+ +R+L + +FVLDEADEMLSRGFK QI +FQ L ++QV L
Sbjct 57 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLL 116
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP D+LE+T +FMR P RILVKK
Sbjct 117 SATMPTDVLEVTKKFMRDPIRILVKK 142
> xla:444845 MGC86382; translation initiation factor eIF4A II;
K03257 translation initiation factor 4A
Length=406
Score = 116 bits (290), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/86 (63%), Positives = 68/86 (79%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H++VGTPGRV DM+ +R+L ++ +FVLDEADEMLSRGFK QI +FQ L + QV L
Sbjct 153 HIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLSSNAQVVLL 212
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMPAD+LE+T +FMR P RILVKK
Sbjct 213 SATMPADVLEVTKKFMRDPIRILVKK 238
> mmu:13682 Eif4a2, 4833432N07Rik, BM-010, Ddx2b, Eif4; eukaryotic
translation initiation factor 4A2 (EC:3.6.4.13); K03257
translation initiation factor 4A
Length=312
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H+VVGTPGRV DM+ +R+L + +FVLDEADEMLSRGFK QI +FQ L +QV L
Sbjct 59 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLL 118
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP D+LE+T +FMR P RILVKK
Sbjct 119 SATMPTDVLEVTKKFMRDPIRILVKK 144
> dre:399484 eif4a1b, fb54c08, wu:fb54c08; eukaryotic translation
initiation factor 4A, isoform 1B; K03257 translation initiation
factor 4A
Length=406
Score = 115 bits (289), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/86 (62%), Positives = 69/86 (80%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H+VVGTPGRV DM+ ++ L ++ +FVLDEADEMLSRGFK QI +FQ L +QV L
Sbjct 153 HIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSRGFKDQIYEIFQKLSTSIQVVLL 212
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMPA++L++TT+FMR+P RILVKK
Sbjct 213 SATMPAEVLDVTTKFMREPVRILVKK 238
> mmu:13681 Eif4a1, BM-010, Ddx2a, Eif4; eukaryotic translation
initiation factor 4A1 (EC:3.6.4.13); K03257 translation initiation
factor 4A
Length=364
Score = 115 bits (288), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/86 (62%), Positives = 68/86 (79%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H++VGTPGRV DM+ +R+L ++ +FVLDEADEMLSRGFK QI +FQ L + QV L
Sbjct 153 HIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLL 212
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP+D+LE+T +FMR P RILVKK
Sbjct 213 SATMPSDVLEVTKKFMRDPIRILVKK 238
> hsa:1974 EIF4A2, BM-010, DDX2B, EIF4A, EIF4F, eIF-4A-II, eIF4A-II;
eukaryotic translation initiation factor 4A2 (EC:3.6.4.13);
K03257 translation initiation factor 4A
Length=407
Score = 114 bits (285), Expect = 8e-26, Method: Composition-based stats.
Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
H+VVGTPGRV DM+ +R+L + +FVLDEADEMLSRGFK QI +FQ L +QV L
Sbjct 154 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLL 213
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP D+LE+T +FMR P RILVKK
Sbjct 214 SATMPTDVLEVTKKFMRDPIRILVKK 239
> ath:AT3G19760 eukaryotic translation initiation factor 4A, putative
/ eIF-4A, putative / DEAD box RNA helicase, putative;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=408
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 71/88 (80%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVHVV GTPGRV DM+++R LR + L +LDE+DEMLSRGFK QI V+++LP D+QV
Sbjct 153 GVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVC 212
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T++FM +P +ILVK+
Sbjct 213 LVSATLPHEILEMTSKFMTEPVKILVKR 240
> sce:YKR059W TIF1; Tif1p (EC:3.6.1.-); K03257 translation initiation
factor 4A
Length=395
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
+VVGTPGRV D +++R R D + +F+LDEADEMLS GFK QI +F LP QV L
Sbjct 141 QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLL 200
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP D+LE+TT+FMR P RILVKK
Sbjct 201 SATMPNDVLEVTTKFMRNPVRILVKK 226
> sce:YJL138C TIF2; Tif2p (EC:3.6.1.-); K03257 translation initiation
factor 4A
Length=395
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 0/86 (0%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
+VVGTPGRV D +++R R D + +F+LDEADEMLS GFK QI +F LP QV L
Sbjct 141 QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLL 200
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP D+LE+TT+FMR P RILVKK
Sbjct 201 SATMPNDVLEVTTKFMRNPVRILVKK 226
> tgo:TGME49_056770 ATP-dependent helicase, putative (EC:3.4.22.44);
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=395
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH+V GTPGRV M+ +RH H+ L VLDEADEML+RGFK Q+ ++++LP QV
Sbjct 140 GVHIVSGTPGRVFHMIAQRHFSTRHIKLLVLDEADEMLNRGFKEQVYDIYRYLPPSTQVV 199
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P ++LE+TT+FM P R+LVK+
Sbjct 200 LVSATLPHEVLEMTTKFMDDPFRVLVKR 227
> cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R+LR + L VLDEADEML++GFK Q+ ++++LP QV
Sbjct 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T++FM P RILVK+
Sbjct 204 LLSATLPHEILEMTSKFMTDPIRILVKR 231
> cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R+LR + L VLDEADEML++GFK Q+ ++++LP QV
Sbjct 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T++FM P RILVK+
Sbjct 204 LLSATLPHEILEMTSKFMTDPIRILVKR 231
> dre:394053 eif4a3, MGC56139, ddx48, eIF4A-III, zgc:56139; eukaryotic
translation initiation factor 4A, isoform 3 (EC:3.6.4.13);
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=406
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R LR + + VLDEADEML++GFK QI V+++LP QV
Sbjct 151 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVC 210
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T +FM P RILVK+
Sbjct 211 LISATLPHEILEMTNKFMTDPIRILVKR 238
> hsa:9775 EIF4A3, DDX48, DKFZp686O16189, KIAA0111, MGC10862,
NMP265, NUK34, eIF4AIII; eukaryotic translation initiation factor
4A3 (EC:3.6.4.13); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R LR + + VLDEADEML++GFK QI V+++LP QV
Sbjct 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T +FM P RILVK+
Sbjct 216 LISATLPHEILEMTNKFMTDPIRILVKR 243
> tpv:TP01_0765 eukaryotic translation initiation factor 4A; K13025
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=394
Score = 107 bits (266), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 66/88 (75%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GV +V GTPGRVN M+ RHL ++ +LDEADEML+RGFK Q+ SV+++LP +QV
Sbjct 139 GVQIVSGTPGRVNHMITDRHLNTRNIKQLILDEADEMLNRGFKEQVYSVYRYLPPTIQVV 198
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P D++E+T +FM P ++LVK+
Sbjct 199 LVSATLPHDVIEITNKFMNNPFKVLVKR 226
> mmu:192170 Eif4a3, 2400003O03Rik, Ddx48, MGC6664, MGC6715, eIF4A-III,
mKIAA0111; eukaryotic translation initiation factor
4A3 (EC:3.6.4.13); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R LR + + VLDEADEML++GFK QI V+++LP QV
Sbjct 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T +FM P RILVK+
Sbjct 216 LISATLPHEILEMTNKFMTDPIRILVKR 243
> dre:100330671 eukaryotic translation initiation factor 4A-like;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=406
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R LR + + VLDEADEML++GFK QI V+++LP QV
Sbjct 151 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVC 210
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T +FM P RILVK+
Sbjct 211 LISATLPHEILEMTNKFMTDPIRILVKR 238
> xla:399362 eif4a3, XeIF-4AIII, ddx48, eif4a3-B, eif4aiii, nmp265,
nuk34; eukaryotic translation initiation factor 4A3 (EC:3.6.4.13);
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=414
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R LR + + VLDEADEML++GFK QI V+++LP QV
Sbjct 159 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVC 218
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T +FM P RILVK+
Sbjct 219 LISATLPHEILEMTNKFMTDPIRILVKR 246
> bbo:BBOV_IV010990 23.m06251; eukaryotic initiation factor 4A-3
(eIF4A-3); K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=395
Score = 106 bits (265), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 68/88 (77%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH+V GTPGRVN M+ +RHL ++ +LDEADEML+RGFK Q+ S++++LP +QV
Sbjct 140 GVHIVSGTPGRVNHMIAERHLNTRNIKQMILDEADEMLNRGFKDQVYSIYRYLPPTLQVI 199
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +++E+T +FM P R+LVK+
Sbjct 200 LVSATLPQEVVEITEKFMNNPFRVLVKR 227
> mmu:668137 Gm8994, B020013A22Rik, EG668137; predicted gene 8994;
K13025 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 64/88 (72%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R L + + VLDEADEML+RGFK QI V+++LP QV
Sbjct 156 GQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVV 215
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T +FM P RILVK+
Sbjct 216 LVSATLPHEILEMTNKFMTHPIRILVKR 243
> pfa:PFD1070w eukaryotic initiation factor, putative; K13025
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=390
Score = 104 bits (259), Expect = 8e-23, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 66/88 (75%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVHV+ GTPGR+ M+ RHL+C ++ V+DEADEML++GFK Q+ +++ L + Q+
Sbjct 135 GVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQII 194
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P ++LE+T +FM KP +ILVK+
Sbjct 195 LSSATLPQEVLEITNKFMHKPVKILVKR 222
> mmu:434050 Gm5576, EG434050; predicted pseudogene 5576; K13025
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=411
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G HVV GTPGRV DM+ +R LR + + VLDEADEML++GFK QI V+++LP QV
Sbjct 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P +ILE+T +FM P ILVK+
Sbjct 216 LISATLPHEILEMTNKFMTDPICILVKR 243
> ath:AT1G51380 eukaryotic translation initiation factor 4A, putative
/ eIF-4A, putative; K13025 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=392
Score = 102 bits (255), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 0/87 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH V GTPGRV DM+++ L+ + L VLDE+DEMLS+G K QI V++ LP D+QV
Sbjct 140 GVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVC 199
Query 61 LFSATMPADILELTTQFMRKPKRILVK 87
L SAT+P +ILE+T +FM P RILVK
Sbjct 200 LISATLPQEILEMTEKFMTDPVRILVK 226
> cel:F57B9.3 hypothetical protein; K03257 translation initiation
factor 4A
Length=363
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query 3 HVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVALF 62
HV++GTP D + + +FVLDEADEMLS+GFK QI VF+ +PQDVQV L
Sbjct 111 HVLMGTP---KDFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLL 167
Query 63 SATMPADILELTTQFMRKPKRILVKK 88
SATMP+++L++T +FMR P RILVKK
Sbjct 168 SATMPSEVLDVTNRFMRDPIRILVKK 193
> cpv:cgd7_3940 eIF4A-1; eukaryotic translation initiation factor
4A-1; RNA SFII helicase ; K13025 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=396
Score = 91.3 bits (225), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GV ++ GTPGRV M+E+ +L + L ++DEADEM GFK Q+ ++++LP +Q
Sbjct 141 GVSIISGTPGRVLQMIEQGYLSTKKIKLLIIDEADEMFDYGFKTQVYDIYKYLPPRIQTV 200
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
L SAT+P DIL + +FMR P +ILV K
Sbjct 201 LVSATLPDDILVMAQKFMRNPLQILVPK 228
> sce:YDR021W FAL1; Fal1p (EC:3.6.1.-); K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 90.5 bits (223), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSR--GFKAQILSVFQHLPQDVQ 58
G V GTPGRV DM++K+ L+ ++ + VLDEADE+LS GFK QI +F LP++ Q
Sbjct 142 GCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQ 201
Query 59 VALFSATMPADILELTTQFMRKPKRILVKK 88
V + SATM DILE+T +FM P +ILVK+
Sbjct 202 VVVVSATMNKDILEVTRKFMNDPVKILVKR 231
> ath:AT5G26742 emb1138 (embryo defective 1138); ATP binding /
ATP-dependent helicase/ RNA binding / helicase/ nucleic acid
binding / zinc ion binding
Length=748
Score = 78.2 bits (191), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 0/84 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GV VVVGTPGR+ D++E R L+ + VLDEAD+ML+ GF+ + S+ ++LP Q
Sbjct 228 GVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSM 287
Query 61 LFSATMPADILELTTQFMRKPKRI 84
LFSATMP + +L +++ P I
Sbjct 288 LFSATMPTWVKKLARKYLDNPLNI 311
> eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-dependent
RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Length=629
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 0/88 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G +VVGTPGR+ D +++ L + VLDEADEML GF + ++ +P+ Q A
Sbjct 125 GPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTA 184
Query 61 LFSATMPADILELTTQFMRKPKRILVKK 88
LFSATMP I +T +FM++P+ + ++
Sbjct 185 LFSATMPEAIRRITRRFMKEPQEVRIQS 212
> mmu:67997 Ddx59, 1210002B07Rik, 4833411G06Rik; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 59 (EC:3.6.4.13)
Length=619
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 0/85 (0%)
Query 2 VHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVAL 61
V V++ TPGR+ D++++ + + + V+DEAD ML GF+ Q+L V +H P D Q L
Sbjct 323 VKVIIATPGRLLDIIKQSSVSLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTPGDCQTIL 382
Query 62 FSATMPADILELTTQFMRKPKRILV 86
SAT+P I +LT Q + P RI+
Sbjct 383 VSATIPDSIEQLTDQLLHNPVRIIT 407
> ath:AT3G22330 PMH2; PMH2 (putative mitochondrial RNA helicase
2); ATP binding / ATP-dependent helicase/ helicase/ nucleic
acid binding
Length=616
Score = 74.7 bits (182), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 0/81 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GV V VGTPGRV D+M++ L + VLDEAD+ML GF + + + LP+ Q
Sbjct 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query 61 LFSATMPADILELTTQFMRKP 81
+FSATMP+ I LT +++ P
Sbjct 286 MFSATMPSWIRSLTKKYLNNP 306
> ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putative
(RH30)
Length=484
Score = 74.3 bits (181), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 0/86 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GV +V+ TPGR+ DM+E +H + VLDEAD ML GF+ QI + + D Q
Sbjct 288 GVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL 347
Query 61 LFSATMPADILELTTQFMRKPKRILV 86
L+SAT P ++ L QF+R P + ++
Sbjct 348 LWSATWPREVETLARQFLRDPYKAII 373
> ath:AT3G22310 PMH1; PMH1 (PUTATIVE MITOCHONDRIAL RNA HELICASE
1); ATP-dependent helicase/ DNA binding / RNA binding
Length=610
Score = 74.3 bits (181), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 0/84 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
G+ V VGTPGR+ D+M++ L + VLDEAD+ML GF + + Q LP Q
Sbjct 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query 61 LFSATMPADILELTTQFMRKPKRI 84
+FSATMP+ I LT +++ P I
Sbjct 298 MFSATMPSWIRSLTKKYLNNPLTI 321
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 73.9 bits (180), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 0/86 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GV +V+ TPGR+ DMME + + VLDEAD ML GF QI + H+ D Q
Sbjct 222 GVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTL 281
Query 61 LFSATMPADILELTTQFMRKPKRILV 86
+SAT P ++ +L+ +F+ P ++++
Sbjct 282 YWSATWPKEVEQLSKKFLYNPYKVII 307
> ath:AT4G33370 DEAD-box protein abstrakt, putative
Length=542
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 0/81 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GVH+VV TPGR+ D++ K+ + D L LDEAD ++ GF+ I VF H Q
Sbjct 229 GVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTL 288
Query 61 LFSATMPADILELTTQFMRKP 81
LFSATMPA I T + KP
Sbjct 289 LFSATMPAKIQIFATSALVKP 309
> hsa:83479 DDX59, DKFZp564B1023, ZNHIT5; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 59 (EC:3.6.4.13)
Length=619
Score = 72.0 bits (175), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 0/88 (0%)
Query 2 VHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVAL 61
V V++ TPGR+ D++++ + + + V+DEAD ML GF+ Q+L + +++P D Q L
Sbjct 323 VKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTIL 382
Query 62 FSATMPADILELTTQFMRKPKRILVKKR 89
SAT+P I +L +Q + P RI+ ++
Sbjct 383 VSATIPTSIEQLASQLLHNPVRIITGEK 410
> bbo:BBOV_III000190 17.m07043; p68 RNA helicase protein
Length=568
Score = 71.6 bits (174), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 0/79 (0%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GV ++V TPGR+ D + LR D + FVLDEAD ML GF+ QI + + D Q
Sbjct 306 GVDIMVATPGRLLDCLSSGLLRLDRVSYFVLDEADRMLDMGFEPQIRMIASQIRPDRQTL 365
Query 61 LFSATMPADILELTTQFMR 79
LFSAT PA I L ++F +
Sbjct 366 LFSATWPASIRRLASEFCK 384
> ath:AT3G02065 DEAD/DEAH box helicase family protein
Length=505
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query 1 GVHVVVGTPGRVNDMMEKRHLRCDHMILFVLDEADEMLSRGFKAQILSVFQHLPQDVQVA 60
GV +++GTPGRV D++ K + D+++ FVLDE D ML RGF+ Q++ +FQ L Q QV
Sbjct 236 GVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-QVL 294
Query 61 LFSATMPADI 70
LFSAT+ ++
Sbjct 295 LFSATISREV 304
Lambda K H
0.328 0.140 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2017039696
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40