bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_1611_orf1
Length=105
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_063050 60S ribosomal protein L13, putative ; K02873... 162 2e-40
bbo:BBOV_IV005370 23.m06407; ribosomal protein L13; K02873 lar... 128 5e-30
tpv:TP01_0199 60S ribosomal protein L13e; K02873 large subunit... 127 6e-30
cpv:cgd2_2990 60S ribosomal protein L13 ; K02873 large subunit... 120 9e-28
pfa:PF08_0075 60S ribosomal protein L13-2, putative; K02873 la... 111 6e-25
dre:378961 rpl13, zgc:92272; ribosomal protein L13; K02873 lar... 111 7e-25
sce:YDL082W RPL13A; L13A; K02873 large subunit ribosomal prote... 105 3e-23
xla:446306 rpl13, MGC81947; ribosomal protein L13 (EC:3.6.5.3)... 105 3e-23
sce:YMR142C RPL13B; L13B; K02873 large subunit ribosomal prote... 103 1e-22
mmu:100040416 Gm10071; predicted gene 10071 102 4e-22
hsa:6137 RPL13, BBC1, D16S444E, FLJ27453, FLJ27454, MGC117342,... 101 5e-22
xla:100049095 hypothetical protein LOC100049095; K02873 large ... 101 5e-22
mmu:270106 Rpl13, L13; ribosomal protein L13 (EC:3.6.5.3); K02... 101 5e-22
mmu:100040605 Gm15710, OTTMUSG00000025606; predicted gene 15710 101 5e-22
mmu:100039656 Gm12918, OTTMUSG00000009186; predicted gene 1291... 101 5e-22
ath:AT3G49010 ATBBC1; ATBBC1 (ARABIDOPSIS THALIANA BREAST BASI... 99.4 3e-21
ath:AT5G23900 60S ribosomal protein L13 (RPL13D); K02873 large... 96.3 2e-20
cel:C32E8.2 rpl-13; Ribosomal Protein, Large subunit family me... 95.5 3e-20
ath:AT3G48960 60S ribosomal protein L13 (RPL13C); K02873 large... 90.1 1e-18
pfa:PF14_0654 aminophospholipid transporter, putative (EC:3.6.... 29.3 3.2
pfa:PFF0175c conserved Plasmodium protein, unknown function 27.7 8.6
> tgo:TGME49_063050 60S ribosomal protein L13, putative ; K02873
large subunit ribosomal protein L13e
Length=319
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 89/104 (85%), Gaps = 0/104 (0%)
Query 2 QKKAAINGVRPVDLLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDH 61
Q+KAA GV P LLRP V PTQ+YN+KVR GRGFTLEELK+VG+SPRVALSIG+AVDH
Sbjct 146 QEKAAKLGVVPSGLLRPIVHPPTQRYNLKVRAGRGFTLEELKSVGLSPRVALSIGVAVDH 205
Query 62 RRRNRSQESLNNNINRLKLYLNKLVLFQRGSKPKKGLAGVPADT 105
RRRNRS ESLN N+ RLK YL KLVLFQRGSK KKGLAG+PADT
Sbjct 206 RRRNRSAESLNANVTRLKAYLAKLVLFQRGSKAKKGLAGIPADT 249
> bbo:BBOV_IV005370 23.m06407; ribosomal protein L13; K02873 large
subunit ribosomal protein L13e
Length=202
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 77/103 (74%), Gaps = 0/103 (0%)
Query 3 KKAAINGVRPVDLLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHR 62
+KAA GV PV LRP V P+++YN KVR GRGFT++ELKA G+S +VA+SIGIAVDHR
Sbjct 39 QKAAKAGVTPVGYLRPVVHMPSRRYNYKVRLGRGFTIQELKAAGISKKVAMSIGIAVDHR 98
Query 63 RRNRSQESLNNNINRLKLYLNKLVLFQRGSKPKKGLAGVPADT 105
R NR+ ESLN N+ RLK YL+KLV+ R K KG G+P DT
Sbjct 99 RCNRNAESLNLNVERLKTYLSKLVMIPRKKKACKGFCGIPDDT 141
> tpv:TP01_0199 60S ribosomal protein L13e; K02873 large subunit
ribosomal protein L13e
Length=205
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 78/104 (75%), Gaps = 0/104 (0%)
Query 2 QKKAAINGVRPVDLLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDH 61
Q+KAA +G+ P LRP V P+++YN K+R GRGFTL+ELK G+ +VA S+G+AVDH
Sbjct 39 QRKAAASGLTPTGYLRPLVHMPSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDH 98
Query 62 RRRNRSQESLNNNINRLKLYLNKLVLFQRGSKPKKGLAGVPADT 105
RR N+ ESLN N+NRLK YL+KLVLF R KKG AG+P+DT
Sbjct 99 RRTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAGLPSDT 142
> cpv:cgd2_2990 60S ribosomal protein L13 ; K02873 large subunit
ribosomal protein L13e
Length=207
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Query 2 QKKAAINGVRPVDLLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDH 61
QK A G RPV +LRP V PTQ+YN+K R GRGFTLEEL A G++ + A+SIGIAVDH
Sbjct 38 QKAVAEAGFRPVGMLRPIVHPPTQRYNMKTRLGRGFTLEELSACGINKKAAMSIGIAVDH 97
Query 62 RRRNRSQESLNNNINRLKLYLNKLVLFQR-GSKPKKGLAGVPADT 105
RR + S+E+ N++RLK Y+N +VL R G K KKG AG+P D+
Sbjct 98 RRTDLSEETFQINVDRLKKYINGIVLQPRKGKKTKKGFAGIPNDS 142
> pfa:PF08_0075 60S ribosomal protein L13-2, putative; K02873
large subunit ribosomal protein L13e
Length=215
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query 8 NGVRPVDLLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRS 67
NG P++ L P V CPTQ+YN + R G+GFT EELK G++PR A +IGI D RR+NRS
Sbjct 45 NGGTPIEKLHPIVHCPTQRYNFRTRLGKGFTFEELKGAGLTPRAAQTIGICYDKRRKNRS 104
Query 68 QESLNNNINRLKLYLNKLVLFQ-RGSKPKKGLAGVPAD 104
+ESL N+ RL Y N LV+ + +K KKG+ G+PAD
Sbjct 105 EESLTKNVERLLKYKNSLVMIPLKKNKAKKGIGGIPAD 142
> dre:378961 rpl13, zgc:92272; ribosomal protein L13; K02873 large
subunit ribosomal protein L13e
Length=211
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Query 2 QKKAAINGVRPVD-LLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVD 60
Q KA RPV LRP VRCPT +Y+ KVR GRGFTLEELKA G++ +VA +IGI+VD
Sbjct 40 QAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVD 99
Query 61 HRRRNRSQESLNNNINRLKLYLNKLVLFQR-GSKPKKG 97
RRRNRS ESL N+ RLK Y KL++F R +KPKKG
Sbjct 100 SRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKG 137
> sce:YDL082W RPL13A; L13A; K02873 large subunit ribosomal protein
L13e
Length=199
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 0/83 (0%)
Query 11 RPVDLLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQES 70
RP+DLLRP VR PT KYN KVR GRGFTL E+KA G++ A +IGIAVDHRR+NR+QE
Sbjct 49 RPLDLLRPVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEI 108
Query 71 LNNNINRLKLYLNKLVLFQRGSK 93
+ N+ RLK Y +K+++F R K
Sbjct 109 FDANVQRLKEYQSKIIVFPRNGK 131
> xla:446306 rpl13, MGC81947; ribosomal protein L13 (EC:3.6.5.3);
K02873 large subunit ribosomal protein L13e
Length=211
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Query 2 QKKAAINGVRPVD-LLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVD 60
Q KA + RPV +RP VRCPT +Y+ KVR GRGF+LEELKA G++ +VA +IGI+VD
Sbjct 40 QVKARLVAPRPVSGPVRPVVRCPTNRYHTKVRAGRGFSLEELKAAGINKKVARTIGISVD 99
Query 61 HRRRNRSQESLNNNINRLKLYLNKLVLFQRG-SKPKKG 97
RRRN+S E L N+ RLK Y +KL++F R S PKKG
Sbjct 100 PRRRNKSTEGLQTNVQRLKEYRSKLIVFPRKPSAPKKG 137
> sce:YMR142C RPL13B; L13B; K02873 large subunit ribosomal protein
L13e
Length=199
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 0/82 (0%)
Query 12 PVDLLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESL 71
P+DLLRP VR PT KYN KVR GRGFTL E+KA G++ A +IGIAVDHRR+NR+QE
Sbjct 50 PLDLLRPVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIF 109
Query 72 NNNINRLKLYLNKLVLFQRGSK 93
+ N+ RLK Y +K+++F R K
Sbjct 110 DANVQRLKEYQSKIIVFPRDGK 131
> mmu:100040416 Gm10071; predicted gene 10071
Length=211
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query 16 LRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESLNNNI 75
+RP VRCPT +Y+ KVR GRGF+LEEL+ G+ +VA +IGI+VD RRRN+S ESL N+
Sbjct 55 IRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANV 114
Query 76 NRLKLYLNKLVLFQRG-SKPKKG 97
RLK Y +KL+LF R S PKKG
Sbjct 115 QRLKEYRSKLILFPRKPSAPKKG 137
> hsa:6137 RPL13, BBC1, D16S444E, FLJ27453, FLJ27454, MGC117342,
MGC71373; ribosomal protein L13; K02873 large subunit ribosomal
protein L13e
Length=211
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query 16 LRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESLNNNI 75
+RP VRCPT +Y+ KVR GRGF+LEEL+ G+ +VA +IGI+VD RRRN+S ESL N+
Sbjct 55 IRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANV 114
Query 76 NRLKLYLNKLVLFQRG-SKPKKG 97
RLK Y +KL+LF R S PKKG
Sbjct 115 QRLKEYRSKLILFPRKPSAPKKG 137
> xla:100049095 hypothetical protein LOC100049095; K02873 large
subunit ribosomal protein L13e
Length=211
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query 16 LRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESLNNNI 75
+RP VRCPT +Y+ KVR GRGF+LEEL+ G+ +VA +IGI+VD RRRN+S ESL N+
Sbjct 55 IRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANV 114
Query 76 NRLKLYLNKLVLFQRG-SKPKKG 97
RLK Y +KL+LF R S PKKG
Sbjct 115 QRLKEYRSKLILFPRKPSAPKKG 137
> mmu:270106 Rpl13, L13; ribosomal protein L13 (EC:3.6.5.3); K02873
large subunit ribosomal protein L13e
Length=211
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query 16 LRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESLNNNI 75
+RP VRCPT +Y+ KVR GRGF+LEEL+ G+ +VA +IGI+VD RRRN+S ESL N+
Sbjct 55 IRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANV 114
Query 76 NRLKLYLNKLVLFQRG-SKPKKG 97
RLK Y +KL+LF R S PKKG
Sbjct 115 QRLKEYRSKLILFPRKPSAPKKG 137
> mmu:100040605 Gm15710, OTTMUSG00000025606; predicted gene 15710
Length=211
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query 16 LRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESLNNNI 75
+RP VRCPT +Y+ KVR GRGF+LEEL+ G+ +VA +IGI+VD RRRN+S ESL N+
Sbjct 55 IRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANV 114
Query 76 NRLKLYLNKLVLFQRG-SKPKKG 97
RLK Y +KL+LF R S PKKG
Sbjct 115 QRLKEYRSKLILFPRKPSAPKKG 137
> mmu:100039656 Gm12918, OTTMUSG00000009186; predicted gene 12918;
K02873 large subunit ribosomal protein L13e
Length=211
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query 16 LRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESLNNNI 75
+RP VRCPT +Y+ KVR GRGF+LEEL+ G+ +VA +IGI+VD RRRN+S ESL N+
Sbjct 55 IRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANV 114
Query 76 NRLKLYLNKLVLFQRG-SKPKKG 97
RLK Y +KL+LF R S PKKG
Sbjct 115 QRLKEYRSKLILFPRKPSAPKKG 137
> ath:AT3G49010 ATBBC1; ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC
CONSERVED 1); structural constituent of ribosome
Length=206
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query 2 QKKAAINGVRPVD-LLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVD 60
QKKA RP LRP V T KYN+KVR G+GFTLEELKA G+ ++A +IGIAVD
Sbjct 38 QKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVD 97
Query 61 HRRRNRSQESLNNNINRLKLYLNKLVLFQRGSKPKKGLAGVPAD 104
HRR+NRS E L N+ RLK Y KLV+F R ++ K P +
Sbjct 98 HRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEE 141
> ath:AT5G23900 60S ribosomal protein L13 (RPL13D); K02873 large
subunit ribosomal protein L13e
Length=206
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query 2 QKKAAINGVRPVD-LLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVD 60
QKKA RP LRP V T KYN+KVR G+GFTLEELK G+ ++A +IGI+VD
Sbjct 38 QKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVD 97
Query 61 HRRRNRSQESLNNNINRLKLYLNKLVLFQRGSKPKKGLAGVPAD 104
HRR+NRS E L +N+ RLK Y KLV+F R S+ K P +
Sbjct 98 HRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEE 141
> cel:C32E8.2 rpl-13; Ribosomal Protein, Large subunit family
member (rpl-13); K02873 large subunit ribosomal protein L13e
Length=207
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query 2 QKKAAINGVRPV-DLLRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVD 60
Q KA RPV LLR VRCP ++YN K R GRGF+L+ELKA G+S A +IGIAVD
Sbjct 40 QAKAVEIAPRPVAGLLRSVVRCPQKRYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVD 99
Query 61 HRRRNRSQESLNNNINRLKLYLNKLVLF-QRGSKPKKG 97
RR N++ E L N +RLK Y KL+LF ++ S PKKG
Sbjct 100 VRRTNKTAEGLKANADRLKEYKAKLILFPKKASAPKKG 137
> ath:AT3G48960 60S ribosomal protein L13 (RPL13C); K02873 large
subunit ribosomal protein L13e
Length=206
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 0/78 (0%)
Query 16 LRPAVRCPTQKYNIKVREGRGFTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESLNNNI 75
+RP V T YN+KVR G+GFTLEELKA G+ ++A +IGI+VDH R+NRS E N+
Sbjct 53 IRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNV 112
Query 76 NRLKLYLNKLVLFQRGSK 93
RLK Y KLV+F R ++
Sbjct 113 QRLKTYKAKLVIFPRCAR 130
> pfa:PF14_0654 aminophospholipid transporter, putative (EC:3.6.3.1)
Length=2008
Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Query 58 AVDHRRRNRSQESLNNNINRLKLYLNKLVL 87
A+ ++RN+ LN+NINR+KL NK +L
Sbjct 111 AIRKKKRNK----LNDNINRIKLERNKTLL 136
> pfa:PFF0175c conserved Plasmodium protein, unknown function
Length=2368
Score = 27.7 bits (60), Expect = 8.6, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Query 37 FTLEELKAVGVSPRVALSIGIAVDHRRRNRSQESLNN 73
F+L E + + PR GI +DH+R+ ++ + +NN
Sbjct 1228 FSLLEYEKISNDPR-----GIYIDHKRKEKNDKGVNN 1259
Lambda K H
0.318 0.136 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2017521068
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40