bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_1093_orf3
Length=114
Score E
Sequences producing significant alignments: (Bits) Value
pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasom... 175 3e-44
sce:YGL048C RPT6, CIM3, CRL3, SCB68, SUG1; One of six ATPases ... 174 7e-44
tgo:TGME49_061010 26S protease regulatory subunit 8, putative ... 173 1e-43
cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-lik... 172 2e-43
ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPAS... 172 2e-43
cpv:cgd6_920 26s protease regulatory subunit 8 ; K03066 26S pr... 172 2e-43
dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasom... 172 3e-43
cel:F56F11.4 hypothetical protein; K03066 26S proteasome regul... 171 4e-43
ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03... 170 8e-43
bbo:BBOV_I000480 16.m00708; tat-binding protein-like protein; ... 170 1e-42
xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome ... 168 4e-42
hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG; p... 168 4e-42
mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subu... 168 4e-42
xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; prot... 167 5e-42
tpv:TP02_0893 26S proteasome regulatory subunit; K03066 26S pr... 150 1e-36
dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome (p... 136 2e-32
tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062 ... 135 3e-32
tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S ... 135 4e-32
mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macro... 135 5e-32
hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome ... 135 5e-32
dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,... 134 5e-32
xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, mac... 133 1e-31
pfa:PF10_0081 26S proteasome regulatory subunit 4, putative; K... 132 3e-31
bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit 4... 132 3e-31
cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA A... 130 1e-30
tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4... 129 2e-30
bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit... 129 2e-30
ath:AT1G53750 RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ... 129 3e-30
cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like... 129 3e-30
dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome, ma... 128 4e-30
xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S s... 128 4e-30
dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome, ... 128 4e-30
xla:398853 psmc4, MGC68784; proteasome (prosome, macropain) 26... 128 4e-30
mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome... 128 4e-30
hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;... 128 4e-30
hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S... 128 4e-30
mmu:19181 Psmc2; proteasome (prosome, macropain) 26S subunit, ... 127 7e-30
cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like... 127 1e-29
cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA AT... 127 1e-29
sce:YKL145W RPT1, CIM5, YTA3; One of six ATPases of the 19S re... 126 2e-29
ath:AT2G20140 26S protease regulatory complex subunit 4, putat... 125 3e-29
ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE ... 125 4e-29
ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a)... 125 5e-29
tgo:TGME49_029950 26S protease regulatory subunit 6b, putative... 124 9e-29
ath:AT1G53780 ATP binding / ATPase/ hydrolase/ nucleoside-trip... 123 1e-28
cel:F56H1.4 rpt-5; proteasome Regulatory Particle, ATPase-like... 122 2e-28
mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S su... 122 2e-28
hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)... 122 2e-28
bbo:BBOV_IV004580 23.m06430; 26S protease regulatory subunit 6... 122 3e-28
cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteaso... 122 3e-28
> pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasome
regulatory subunit T6
Length=435
Score = 175 bits (444), Expect = 3e-44, Method: Composition-based stats.
Identities = 87/114 (76%), Positives = 91/114 (79%), Gaps = 15/114 (13%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQKYIGEGS MVRELF+MAREH+PSIIFMDEI
Sbjct 222 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 281
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGSQR+ G DSEVQRTMMELLNQLDGFES +NIKV
Sbjct 282 DSIGSQRIEGEHG---------------DSEVQRTMMELLNQLDGFESTQNIKV 320
> sce:YGL048C RPT6, CIM3, CRL3, SCB68, SUG1; One of six ATPases
of the 19S regulatory particle of the 26S proteasome involved
in the degradation of ubiquitinated substrates; bound by
ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly
to the nucleus throughout the cell cycle; K03066 26S proteasome
regulatory subunit T6
Length=405
Score = 174 bits (440), Expect = 7e-44, Method: Composition-based stats.
Identities = 86/114 (75%), Positives = 93/114 (81%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT C FIRVSG ELVQKYIGEGS MVRELF+MAREH+PSIIFMDEI
Sbjct 191 PGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 250
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS RV +GGG DSEVQRTM+ELLNQLDGFE++KNIK+
Sbjct 251 DSIGSTRVEGSGGG--------------DSEVQRTMLELLNQLDGFETSKNIKI 290
> tgo:TGME49_061010 26S protease regulatory subunit 8, putative
; K03066 26S proteasome regulatory subunit T6
Length=409
Score = 173 bits (438), Expect = 1e-43, Method: Composition-based stats.
Identities = 88/114 (77%), Positives = 91/114 (79%), Gaps = 15/114 (13%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSGGELVQKYIGEGS MVRELF+MAREH+PSIIFMDEI
Sbjct 196 PGTGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 255
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGSQR G DSEVQRTMMELLNQLDGFES +NIKV
Sbjct 256 DSIGSQRTEGEHG---------------DSEVQRTMMELLNQLDGFESTQNIKV 294
> cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-like
family member (rpt-6); K03066 26S proteasome regulatory
subunit T6
Length=416
Score = 172 bits (437), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/114 (74%), Positives = 92/114 (80%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQK+IGEG+ MVRELF+MAREH+PSIIFMDEI
Sbjct 202 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 261
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS RV + GG DSEVQRTM+ELLNQLDGFE+ KNIKV
Sbjct 262 DSIGSSRVEGSSGG--------------DSEVQRTMLELLNQLDGFEATKNIKV 301
> ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE
6A); ATPase; K03066 26S proteasome regulatory subunit T6
Length=419
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 93/114 (81%), Gaps = 13/114 (11%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQKYIGEGS MVRELF+MAREH+PSIIFMDEI
Sbjct 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS R+ + G+GN DSEVQRTM+ELLNQLDGFE++ IKV
Sbjct 264 DSIGSARMES-------------GSGNGDSEVQRTMLELLNQLDGFEASNKIKV 304
> cpv:cgd6_920 26s protease regulatory subunit 8 ; K03066 26S
proteasome regulatory subunit T6
Length=393
Score = 172 bits (436), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/114 (73%), Positives = 90/114 (78%), Gaps = 15/114 (13%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQKYIGEGS MVRELF+MAREH+PS+IFMDEI
Sbjct 180 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSLIFMDEI 239
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGSQR G DSEVQRTM+ELLNQLDGFES +NIK+
Sbjct 240 DSIGSQRTEGESG---------------DSEVQRTMLELLNQLDGFESTQNIKI 278
> dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066 26S
proteasome regulatory subunit T6
Length=406
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/114 (75%), Positives = 93/114 (81%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQK+IGEG+ MVRELF+MAREH+PSIIFMDEI
Sbjct 192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 251
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS R+ GG GG DSEVQRTM+ELLNQLDGFE+ KNIKV
Sbjct 252 DSIGSSRLE--GGSGG------------DSEVQRTMLELLNQLDGFEATKNIKV 291
> cel:F56F11.4 hypothetical protein; K03066 26S proteasome regulatory
subunit T6
Length=432
Score = 171 bits (434), Expect = 4e-43, Method: Composition-based stats.
Identities = 85/114 (74%), Positives = 92/114 (80%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQK+IGEG+ MVRELF+MAREH+PSIIFMDEI
Sbjct 218 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 277
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS RV + GG DSEVQRTM+ELLNQLDGFE+ KNIKV
Sbjct 278 DSIGSSRVEGSRGG--------------DSEVQRTMLELLNQLDGFEATKNIKV 317
> ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03066
26S proteasome regulatory subunit T6
Length=419
Score = 170 bits (431), Expect = 8e-43, Method: Composition-based stats.
Identities = 85/114 (74%), Positives = 93/114 (81%), Gaps = 13/114 (11%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQKYIGEGS MVRELF+MAREH+PSIIFMDEI
Sbjct 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS R+ + G+GN DSEVQRTM+ELLNQLDGFE++ IKV
Sbjct 264 DSIGSARMES-------------GSGNGDSEVQRTMLELLNQLDGFEASNKIKV 304
> bbo:BBOV_I000480 16.m00708; tat-binding protein-like protein;
K03066 26S proteasome regulatory subunit T6
Length=405
Score = 170 bits (430), Expect = 1e-42, Method: Composition-based stats.
Identities = 84/114 (73%), Positives = 90/114 (78%), Gaps = 15/114 (13%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQKYIGEGS MVRELF+MAR H+PSIIFMDEI
Sbjct 192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMARAHAPSIIFMDEI 251
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGSQR +G+ DSEVQRTM+ELLNQLDGFE +NIKV
Sbjct 252 DSIGSQRTD---------------SGHGDSEVQRTMLELLNQLDGFEPYQNIKV 290
> xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome
regulatory subunit T6
Length=461
Score = 168 bits (426), Expect = 4e-42, Method: Composition-based stats.
Identities = 85/114 (74%), Positives = 92/114 (80%), Gaps = 15/114 (13%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQK+IGEG+ MVRELF+MAREH+PSIIFMDEI
Sbjct 187 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 246
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS+ GG GG DSEVQRTM+ELLNQLDGFE+ KNIKV
Sbjct 247 DSIGSRL---EGGSGG------------DSEVQRTMLELLNQLDGFEATKNIKV 285
> hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG;
proteasome (prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=398
Score = 168 bits (425), Expect = 4e-42, Method: Composition-based stats.
Identities = 86/114 (75%), Positives = 93/114 (81%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQK+IGEG+ MVRELF+MAREH+PSIIFMDEI
Sbjct 184 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 243
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS R+ GG GG DSEVQRTM+ELLNQLDGFE+ KNIKV
Sbjct 244 DSIGSSRLE--GGSGG------------DSEVQRTMLELLNQLDGFEATKNIKV 283
> mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subunit,
ATPase 5; K03066 26S proteasome regulatory subunit T6
Length=406
Score = 168 bits (425), Expect = 4e-42, Method: Composition-based stats.
Identities = 86/114 (75%), Positives = 93/114 (81%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQK+IGEG+ MVRELF+MAREH+PSIIFMDEI
Sbjct 192 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 251
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS R+ GG GG DSEVQRTM+ELLNQLDGFE+ KNIKV
Sbjct 252 DSIGSSRLE--GGSGG------------DSEVQRTMLELLNQLDGFEATKNIKV 291
> xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=415
Score = 167 bits (424), Expect = 5e-42, Method: Composition-based stats.
Identities = 86/114 (75%), Positives = 93/114 (81%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQK+IGEG+ MVRELF+MAREH+PSIIFMDEI
Sbjct 201 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 260
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS R+ GG GG DSEVQRTM+ELLNQLDGFE+ KNIKV
Sbjct 261 DSIGSSRLE--GGSGG------------DSEVQRTMLELLNQLDGFEATKNIKV 300
> tpv:TP02_0893 26S proteasome regulatory subunit; K03066 26S
proteasome regulatory subunit T6
Length=393
Score = 150 bits (379), Expect = 1e-36, Method: Composition-based stats.
Identities = 82/114 (71%), Positives = 87/114 (76%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVAHHT CTFIRVSG ELVQKYIGEGS MVRELF+MAR H+PSIIFMDEI
Sbjct 179 PGTGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMARSHAPSIIFMDEI 238
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSIGS R + DSEVQRTM+ELLNQLDGFE +NIKV
Sbjct 239 DSIGSSRGDGS--------------SGGDSEVQRTMLELLNQLDGFEPFQNIKV 278
> dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome
(prosome, macropain) 26S subunit, ATPase, 1a; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 136 bits (342), Expect = 2e-32, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRELF +A EH+PSI+F+DEI
Sbjct 228 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 287
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 288 DAIGTKRYDSNSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 327
> tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062
26S proteasome regulatory subunit T2
Length=441
Score = 135 bits (340), Expect = 3e-32, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRE+F +A EH+PSI+F+DEI
Sbjct 229 PGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLAHEHAPSIVFIDEI 288
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G++R T GG + E+QRTM+ELLNQLDGFES ++KV
Sbjct 289 DAVGTKRYDATSGG--------------EKEIQRTMLELLNQLDGFESKGDVKV 328
> tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S
proteasome regulatory subunit T2
Length=415
Score = 135 bits (339), Expect = 4e-32, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+GEG +VRE+F +A +++PSIIF+DEI
Sbjct 203 PGTGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAEDNAPSIIFIDEI 262
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R T GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 263 DAIGTKRYDATSGG--------------EKEIQRTMLELLNQLDGFDSQSDVKV 302
> mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macropain)
26S subunit, ATPase 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 135 bits (339), Expect = 5e-32, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRELF +A EH+PSI+F+DEI
Sbjct 228 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 287
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 288 DAIGTKRYDSNSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 327
> hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome
(prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 135 bits (339), Expect = 5e-32, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRELF +A EH+PSI+F+DEI
Sbjct 228 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 287
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 288 DAIGTKRYDSNSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 327
> dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,
macropain) 26S subunit, ATPase, 1b; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 134 bits (338), Expect = 5e-32, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRELF +A EH+PSI+F+DEI
Sbjct 228 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 287
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 288 DAIGTKRYDSNSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 327
> xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, macropain)
26S subunit, ATPase, 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 133 bits (335), Expect = 1e-31, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRELF +A EH+PSI+F+DEI
Sbjct 228 PGTGKTLLAKAVANQTSATFLRVVGLELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 287
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 288 DAIGTKRYDSNSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 327
> pfa:PF10_0081 26S proteasome regulatory subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=448
Score = 132 bits (332), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/114 (55%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRE+F +A EH+PSI+F+DEI
Sbjct 236 PGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEI 295
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G++R T GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 296 DAVGTKRYEATSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 335
> bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit
4; K03062 26S proteasome regulatory subunit T2
Length=438
Score = 132 bits (332), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/114 (55%), Positives = 83/114 (72%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ T TF+RV G EL+QKY+GEG +VRE+F +A E++PSIIF+DEI
Sbjct 226 PGTGKTLLAKAVANETCATFLRVVGSELIQKYLGEGPKLVREMFRVAEENAPSIIFIDEI 285
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R T GG + E+QRTM+ELLNQLDGF+ ++KV
Sbjct 286 DAIGTKRYDATSGG--------------EKEIQRTMLELLNQLDGFDPQADVKV 325
> cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA
ATpase ; K03063 26S proteasome regulatory subunit T3
Length=401
Score = 130 bits (327), Expect = 1e-30, Method: Composition-based stats.
Identities = 61/114 (53%), Positives = 81/114 (71%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKT+LA+AVA+HT+ TFIRV G E VQKY+GEG MVR++F +ARE+SP+I+F+DE+
Sbjct 190 PGTGKTMLAKAVANHTTATFIRVVGSEFVQKYLGEGPRMVRDVFRLARENSPAIVFIDEV 249
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSI ++R G D EVQR ++ELLNQ+DGF+ N+KV
Sbjct 250 DSIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQTTNVKV 289
> tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4.8);
K03063 26S proteasome regulatory subunit T3
Length=396
Score = 129 bits (325), Expect = 2e-30, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKT+LA+AVAHHT TFIR G E VQKY+GEG MVR++F +ARE++PSI+F+DE+
Sbjct 185 PGTGKTMLAKAVAHHTDATFIRFVGSEFVQKYLGEGPRMVRDIFRLARENAPSILFIDEV 244
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+I ++R G D EVQR ++ELLNQ+DGF+ N ++KV
Sbjct 245 DAIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQNASVKV 284
> bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit
Rpt3; K03063 26S proteasome regulatory subunit T3
Length=399
Score = 129 bits (324), Expect = 2e-30, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKT+LA+AVAHHT +FIRV G E VQKY+GEG MVR++F +ARE++P+I+F+DE+
Sbjct 188 PGTGKTMLAKAVAHHTGASFIRVVGSEFVQKYLGEGPRMVRDIFRLARENAPAILFIDEV 247
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
DSI ++R G D EVQR ++ELLNQ+DGF+ N +KV
Sbjct 248 DSIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQNAAVKV 287
> ath:AT1G53750 RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A);
ATPase; K03061 26S proteasome regulatory subunit T1
Length=426
Score = 129 bits (324), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/114 (57%), Positives = 78/114 (68%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARAVA+ T FIRV G ELVQKY+GEG+ MVRELF MAR I+F DE+
Sbjct 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG R + GG D+EVQRTM+E++NQLDGF++ NIKV
Sbjct 271 DAIGGARFDDGVGG--------------DNEVQRTMLEIVNQLDGFDARGNIKV 310
> cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like
family member (rpt-2); K03062 26S proteasome regulatory subunit
T2
Length=443
Score = 129 bits (323), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/114 (54%), Positives = 85/114 (74%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+R+ G EL+QKY+G+G MVRELF +A E++PSI+F+DEI
Sbjct 231 PGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEI 290
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G++R + GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 291 DAVGTKRYDSNSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 330
> dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome,
macropain) 26S subunit, ATPase 2; K03061 26S proteasome regulatory
subunit T1
Length=433
Score = 128 bits (322), Expect = 4e-30, Method: Composition-based stats.
Identities = 66/114 (57%), Positives = 76/114 (66%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTL ARAVA+ T FIRV G ELVQKY+GEG+ MVRELF MAR +IF DEI
Sbjct 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG R + GG D+EVQRTM+EL+NQLDGF+ NIKV
Sbjct 278 DAIGGARFDDGAGG--------------DNEVQRTMLELINQLDGFDPRGNIKV 317
> xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S
subunit, ATPase, 2; K03061 26S proteasome regulatory subunit
T1
Length=433
Score = 128 bits (322), Expect = 4e-30, Method: Composition-based stats.
Identities = 66/114 (57%), Positives = 76/114 (66%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTL ARAVA+ T FIRV G ELVQKY+GEG+ MVRELF MAR +IF DEI
Sbjct 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG R + GG D+EVQRTM+EL+NQLDGF+ NIKV
Sbjct 278 DAIGGARFDDGAGG--------------DNEVQRTMLELINQLDGFDPRGNIKV 317
> dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome regulatory
subunit T3
Length=418
Score = 128 bits (322), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PG GKT+LA+AVAHHT+ FIRV G E VQKY+GEG MVR++F +A+E++P+IIF+DEI
Sbjct 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEI 267
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+I ++R G D EVQR ++ELLNQ+DGF+ N N+KV
Sbjct 268 DAIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQNVNVKV 307
> xla:398853 psmc4, MGC68784; proteasome (prosome, macropain)
26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit
T3
Length=420
Score = 128 bits (322), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PG GKT+LA+AVAHHT+ FIRV G E VQKY+GEG MVR++F +A+E++P+IIF+DEI
Sbjct 210 PGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEI 269
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+I ++R G D EVQR ++ELLNQ+DGF+ N N+KV
Sbjct 270 DAIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQNVNVKV 309
> mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome
regulatory subunit T3
Length=418
Score = 128 bits (322), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PG GKT+LA+AVAHHT+ FIRV G E VQKY+GEG MVR++F +A+E++P+IIF+DEI
Sbjct 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEI 267
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+I ++R G D EVQR ++ELLNQ+DGF+ N N+KV
Sbjct 268 DAIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQNVNVKV 307
> hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;
proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063
26S proteasome regulatory subunit T3
Length=418
Score = 128 bits (322), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PG GKT+LA+AVAHHT+ FIRV G E VQKY+GEG MVR++F +A+E++P+IIF+DEI
Sbjct 208 PGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEI 267
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+I ++R G D EVQR ++ELLNQ+DGF+ N N+KV
Sbjct 268 DAIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQNVNVKV 307
> hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S
proteasome regulatory subunit T3
Length=414
Score = 128 bits (322), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PG GKT+LA+AVAHHT+ FIRV G E VQKY+GEG MVR++F +A+E++P+IIF+DEI
Sbjct 204 PGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEI 263
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+I ++R G D EVQR ++ELLNQ+DGF+ N N+KV
Sbjct 264 DAIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQNVNVKV 303
> mmu:19181 Psmc2; proteasome (prosome, macropain) 26S subunit,
ATPase 2; K03061 26S proteasome regulatory subunit T1
Length=475
Score = 127 bits (320), Expect = 7e-30, Method: Composition-based stats.
Identities = 66/114 (57%), Positives = 76/114 (66%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTL ARAVA+ T FIRV G ELVQKY+GEG+ MVRELF MAR +IF DEI
Sbjct 260 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 319
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG R + GG D+EVQRTM+EL+NQLDGF+ NIKV
Sbjct 320 DAIGGARFDDGAGG--------------DNEVQRTMLELINQLDGFDPRGNIKV 359
> cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like
family member (rpt-1); K03061 26S proteasome regulatory subunit
T1
Length=435
Score = 127 bits (318), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/114 (57%), Positives = 76/114 (66%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTL ARAVA+ T FIRV G ELVQKY+GEG+ MVRELF MAR +IF DEI
Sbjct 220 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 279
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G R + GG D+EVQRTM+EL+NQLDGF+ NIKV
Sbjct 280 DAVGGARFDDGQGG--------------DNEVQRTMLELINQLDGFDPRGNIKV 319
> cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA
ATpase ; K03062 26S proteasome regulatory subunit T2
Length=445
Score = 127 bits (318), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/114 (54%), Positives = 87/114 (76%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRELF +A E++PSI+F+DEI
Sbjct 233 PGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEI 292
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G++R H++ GG + ++QRTM+ELLNQLDGFE+ ++KV
Sbjct 293 DAVGTKR-HDSQSGG-------------ERDIQRTMLELLNQLDGFEARGDVKV 332
> sce:YKL145W RPT1, CIM5, YTA3; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; required for optimal
CDC20 transcription; interacts with Rpn12p and the E3 ubiquitin-protein
ligase Ubr1p; K03061 26S proteasome regulatory subunit
T1
Length=467
Score = 126 bits (316), Expect = 2e-29, Method: Composition-based stats.
Identities = 66/114 (57%), Positives = 76/114 (66%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTL ARAVA+ T TFIRV G ELVQKY+GEG+ MVRELF MAR IIF DEI
Sbjct 252 PGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEI 311
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G R + GG D+EVQRTM+EL+ QLDGF+ NIKV
Sbjct 312 DAVGGARFDDGAGG--------------DNEVQRTMLELITQLDGFDPRGNIKV 351
> ath:AT2G20140 26S protease regulatory complex subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=443
Score = 125 bits (314), Expect = 3e-29, Method: Composition-based stats.
Identities = 62/114 (54%), Positives = 83/114 (72%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRELF +A + SPSI+F+DEI
Sbjct 231 PGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEI 290
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G++R GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 291 DAVGTKRYDANSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 330
> ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE
3); ATPase; K03063 26S proteasome regulatory subunit T3
Length=408
Score = 125 bits (313), Expect = 4e-29, Method: Composition-based stats.
Identities = 59/114 (51%), Positives = 79/114 (69%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKT+LA+AVA+HT+ FIRV G E VQKY+GEG MVR++F +A+E++P+IIF+DE+
Sbjct 198 PGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEV 257
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+I + R G D EVQR +MELLNQ+DGF+ N+KV
Sbjct 258 DAIATARFDAQTGA--------------DREVQRILMELLNQMDGFDQTVNVKV 297
> ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a);
ATPase; K03062 26S proteasome regulatory subunit T2
Length=443
Score = 125 bits (313), Expect = 5e-29, Method: Composition-based stats.
Identities = 62/114 (54%), Positives = 83/114 (72%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TF+RV G EL+QKY+G+G +VRELF +A + SPSI+F+DEI
Sbjct 231 PGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEI 290
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G++R GG + E+QRTM+ELLNQLDGF+S ++KV
Sbjct 291 DAVGTKRYDAHSGG--------------EREIQRTMLELLNQLDGFDSRGDVKV 330
> tgo:TGME49_029950 26S protease regulatory subunit 6b, putative
; K03063 26S proteasome regulatory subunit T3
Length=409
Score = 124 bits (310), Expect = 9e-29, Method: Composition-based stats.
Identities = 58/114 (50%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKT+LA+AVA++T+ TFIRV G E VQKY+GEG MVR++F +ARE+SP+I+F+DE+
Sbjct 198 PGTGKTMLAKAVANNTTATFIRVVGSEFVQKYLGEGPRMVRDVFRLARENSPAIVFIDEV 257
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+I ++R G D EVQR ++ELLNQ+DGF+ +KV
Sbjct 258 DAIATKRFDAQTGA--------------DREVQRILLELLNQMDGFDQTTTVKV 297
> ath:AT1G53780 ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/
nucleotide binding / peptidyl-prolyl cis-trans
isomerase; K03061 26S proteasome regulatory subunit T1
Length=598
Score = 123 bits (309), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/114 (56%), Positives = 77/114 (67%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PG+GKTL+ARAVA+ T FIRV G ELVQKYIGEG+ MVRELF MAR I+F DEI
Sbjct 382 PGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEI 441
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG R + G +D+EVQRTM+E+L QLDGF++ NIKV
Sbjct 442 DAIGGARFDDGVG--------------SDNEVQRTMLEILYQLDGFDARGNIKV 481
> cel:F56H1.4 rpt-5; proteasome Regulatory Particle, ATPase-like
family member (rpt-5); K03065 26S proteasome regulatory subunit
T5
Length=430
Score = 122 bits (307), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/114 (50%), Positives = 82/114 (71%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKT++ARAVA T TF++++G +LVQ +IG+G+ +VR+ F +A+E +P+IIF+DE+
Sbjct 220 PGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDEL 279
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + G D EVQRTM+ELLNQLDGF+ N +IKV
Sbjct 280 DAIGTKRFDSEKAG--------------DREVQRTMLELLNQLDGFQPNDDIKV 319
> mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S
subunit, ATPase 3; K03065 26S proteasome regulatory subunit
T5
Length=442
Score = 122 bits (306), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/114 (50%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARA A T TF++++G +LVQ +IG+G+ +VR+ F +A+E +PSIIF+DE+
Sbjct 232 PGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDEL 291
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + G D EVQRTM+ELLNQLDGF+ N +KV
Sbjct 292 DAIGTKRFDSEKAG--------------DREVQRTMLELLNQLDGFQPNTQVKV 331
> hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)
26S subunit, ATPase, 3; K03065 26S proteasome regulatory
subunit T5
Length=439
Score = 122 bits (306), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/114 (50%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARA A T TF++++G +LVQ +IG+G+ +VR+ F +A+E +PSIIF+DE+
Sbjct 229 PGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDEL 288
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + G D EVQRTM+ELLNQLDGF+ N +KV
Sbjct 289 DAIGTKRFDSEKAG--------------DREVQRTMLELLNQLDGFQPNTQVKV 328
> bbo:BBOV_IV004580 23.m06430; 26S protease regulatory subunit
6A; K03065 26S proteasome regulatory subunit T5
Length=418
Score = 122 bits (306), Expect = 3e-28, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLARA A T TF++++G +LVQ +IG+G+ MVR+ F +A+E SP+IIF+DEI
Sbjct 208 PGTGKTLLARACAAQTKATFVKLAGPQLVQMFIGDGAKMVRDAFSLAKEKSPTIIFIDEI 267
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D+IG++R + G D EVQRTM+ELLNQLDGF S+ +KV
Sbjct 268 DAIGTKRFDSELSG--------------DREVQRTMLELLNQLDGFSSDDRVKV 307
> cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteasome
regulatory subunit T2
Length=438
Score = 122 bits (306), Expect = 3e-28, Method: Composition-based stats.
Identities = 60/114 (52%), Positives = 83/114 (72%), Gaps = 14/114 (12%)
Query 1 PGTGKTLLARAVAHHTSCTFIRVSGGELVQKYIGEGSGMVRELFIMAREHSPSIIFMDEI 60
PGTGKTLLA+AVA+ TS TFIR +G +LVQK GEG+ +VR++F MA+E +PSI+F+DEI
Sbjct 226 PGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEI 285
Query 61 DSIGSQRVHNTGGGGGGGGGGGGGNGNNDSEVQRTMMELLNQLDGFESNKNIKV 114
D++G++R + G + EVQRT++ELLNQLDGFES ++K+
Sbjct 286 DAVGTKRFDTSSRG--------------EQEVQRTLLELLNQLDGFESRGDVKI 325
Lambda K H
0.314 0.137 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2047611720
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40