bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
           164,496 sequences; 82,071,388 total letters



Query=  Emax_1052_orf1
Length=144
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  tgo:TGME49_070770  hypothetical protein ; K12822 RNA-binding pr...   109    3e-24
  pfa:PFF0505c  conserved Plasmodium protein, unknown function        46.2    3e-05
  ath:AT2G20190  CLASP; CLASP (CLIP-ASSOCIATED PROTEIN); binding      30.8    1.6


> tgo:TGME49_070770  hypothetical protein ; K12822 RNA-binding 
protein 25
Length=779

 Score =  109 bits (272),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 0/101 (0%)

Query  44   LRKLDPEAIAAAAENSIYRIAPDGTDRRTYIEEDYRPSRRELERLQNAGRREAEYEREFT  103
            L+ ++PE   AA+  S+YR+ PDG DRR YI EDYRP RRELERL +  RR++E+E+EF 
Sbjct  375  LKAMNPELAEAASSCSVYRVGPDGVDRRRYITEDYRPCRRELERLHHLERRDSEFEKEFR  434

Query  104  RREAAWKIQEQNLAVDREKELVGEMEISQEDKRRLIEADLR  144
            RRE  W  +E++   ++EKE+  E EI  +D++ LI  DLR
Sbjct  435  RRELEWITREEDFKQNKEKEVALEQEIRDDDRQHLINQDLR  475


> pfa:PFF0505c  conserved Plasmodium protein, unknown function
Length=960

 Score = 46.2 bits (108),  Expect = 3e-05, Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 0/72 (0%)

Query  73   YIEEDYRPSRRELERLQNAGRREAEYEREFTRREAAWKIQEQNLAVDREKELVGEMEISQ  132
            YI ++Y+ + RE ERLQ    +E + EREF +RE  W   E+ +  D  KE    +   +
Sbjct  416  YISKEYKINWRERERLQKTEYKEKDLEREFYKREKEWIELEEQIKKDTYKEWNKYLLSKK  475

Query  133  EDKRRLIEADLR  144
            +D  +LIE DL+
Sbjct  476  KDIAKLIEIDLK  487


> ath:AT2G20190  CLASP; CLASP (CLIP-ASSOCIATED PROTEIN); binding
Length=1439

 Score = 30.8 bits (68),  Expect = 1.6, Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 26/106 (24%)

Query  12    GSSGSNLTNGSS-----SSKTAAAAAADTAAGSAFHRLRKLDPE----AIAAAAENSIYR  62
             G  G N+++G+      + +T  ++A+D            L+P+      A+A +NSI R
Sbjct  1092  GGVGQNVSSGTQEKLYQNVRTGISSASDL-----------LNPKDSDYTFASAGQNSISR  1140

Query  63    IAPDGTDRRTYIEEDYRPSRRELERLQNA------GRREAEYEREF  102
              +P+G+     I +D  P   E   L         GR E E  RE 
Sbjct  1141  TSPNGSSENIEILDDLSPPHLEKNGLNLTSVDSLEGRHENEVSREL  1186



Lambda     K      H
   0.306    0.121    0.320 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 2814663556


  Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
    Posted date:  Sep 17, 2011 11:19 AM
  Number of letters in database: 82,071,388
  Number of sequences in database:  164,496



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40