bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_0205_orf2
Length=71
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_027260 RIO1 family domain-containing protein (EC:2.... 92.8 3e-19
cpv:cgd7_440 RIO-like kinase domain; N-terminal region conserv... 79.0 3e-15
tpv:TP04_0848 hypothetical protein; K07179 RIO kinase 2 [EC:2.... 67.4 9e-12
bbo:BBOV_III009390 17.m07814; RIO1 family protein; K07179 RIO ... 67.0 1e-11
xla:495048 riok2-b, rio2, riok2b; RIO kinase 2 (EC:2.7.11.1); ... 65.9 3e-11
xla:446636 riok2-a, MGC82490, rio2, riok2, riok2a; RIO kinase ... 65.5 3e-11
mmu:67045 Riok2, 2010110K24Rik, 2410085M17Rik; RIO kinase 2 (y... 64.3 9e-11
hsa:55781 RIOK2, FLJ11159, RIO2; RIO kinase 2 (yeast) (EC:2.7.... 63.5 1e-10
dre:407084 riok2, MGC193752, MGC55376, MGC77493, wu:fe48f07, z... 63.2 2e-10
ath:AT3G51270 ATP binding / catalytic/ protein serine/threonin... 62.8 2e-10
pfa:PFD0975w PfRIO2; RIO-like kinase; K07179 RIO kinase 2 [EC:... 59.7 2e-09
cel:Y105E8B.3 hypothetical protein; K07179 RIO kinase 2 [EC:2.... 57.8 9e-09
sce:YNL207W RIO2; Essential serine kinase involved in the proc... 51.6 6e-07
cpv:cgd1_1240 Sec14 domain containing protein 30.8 0.98
> tgo:TGME49_027260 RIO1 family domain-containing protein (EC:2.7.11.1);
K07179 RIO kinase 2 [EC:2.7.11.1]
Length=519
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 53/68 (77%), Gaps = 0/68 (0%)
Query 4 MRLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKL 63
M+L +VLRYMTK EFR+LTAVEMG KNHEFV L+E IA L+RHSIR ++S L KNKL
Sbjct 1 MKLDPEVLRYMTKEEFRILTAVEMGHKNHEFVPFPLVESIAALKRHSIRDVISTLCKNKL 60
Query 64 IFHCSKSY 71
++ ++ Y
Sbjct 61 LYRSNQKY 68
> cpv:cgd7_440 RIO-like kinase domain; N-terminal region conserved
; K07179 RIO kinase 2 [EC:2.7.11.1]
Length=488
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 0/69 (0%)
Query 3 KMRLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNK 62
KM+L +R+++K E+R+LTAVEMGM+NHE+VS QLIE I+ LRR Q+L LL+NK
Sbjct 3 KMKLDVSNMRFISKDEWRILTAVEMGMRNHEYVSPQLIESISNLRRTGSYQLLQNLLRNK 62
Query 63 LIFHCSKSY 71
L+ SK Y
Sbjct 63 LVSRESKIY 71
> tpv:TP04_0848 hypothetical protein; K07179 RIO kinase 2 [EC:2.7.11.1]
Length=467
Score = 67.4 bits (163), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 0/68 (0%)
Query 4 MRLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKL 63
M+L Y+T EFRVLTA+E+GM+NH+++ LI A LR + +++S LLK KL
Sbjct 1 MKLDPSHFCYLTNTEFRVLTAIEIGMRNHQYIPLSLITTTANLRSVGMSKVISSLLKAKL 60
Query 64 IFHCSKSY 71
I HC K Y
Sbjct 61 IVHCGKVY 68
> bbo:BBOV_III009390 17.m07814; RIO1 family protein; K07179 RIO
kinase 2 [EC:2.7.11.1]
Length=461
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 0/68 (0%)
Query 4 MRLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKL 63
M+L +M+ EFRVLTA+E+GM+NHEF+ +LI A LR + +L+ L K+KL
Sbjct 1 MKLDPSHFAHMSNTEFRVLTAIELGMRNHEFIPVKLITATANLRSCGMSNVLASLTKSKL 60
Query 64 IFHCSKSY 71
I H +SY
Sbjct 61 IVHSGESY 68
> xla:495048 riok2-b, rio2, riok2b; RIO kinase 2 (EC:2.7.11.1);
K07179 RIO kinase 2 [EC:2.7.11.1]
Length=553
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 0/60 (0%)
Query 5 RLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKLI 64
+L +LRY+++ +FRVLTAVEMGMKNHE V A LI IA L+ +IL L+K+KLI
Sbjct 3 KLNVLLLRYLSREDFRVLTAVEMGMKNHEIVPASLIASIASLKHGGCNKILRELVKHKLI 62
> xla:446636 riok2-a, MGC82490, rio2, riok2, riok2a; RIO kinase
2 (EC:2.7.11.1); K07179 RIO kinase 2 [EC:2.7.11.1]
Length=548
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 0/60 (0%)
Query 5 RLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKLI 64
+L +LRY+++ +FRVLTAVEMGMKNHE V A LI IA L+ +IL L+K+KLI
Sbjct 3 KLNVLLLRYLSREDFRVLTAVEMGMKNHEIVPASLIASIASLKHGGCNKILRELVKHKLI 62
> mmu:67045 Riok2, 2010110K24Rik, 2410085M17Rik; RIO kinase 2
(yeast) (EC:2.7.11.1); K07179 RIO kinase 2 [EC:2.7.11.1]
Length=547
Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 0/54 (0%)
Query 11 LRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKLI 64
LRYM++ +FRVLTAVEMGMKNHE V LI IA L+ +IL L+K+KLI
Sbjct 9 LRYMSRDDFRVLTAVEMGMKNHEIVPCSLIASIASLKHGGCNKILRELVKHKLI 62
> hsa:55781 RIOK2, FLJ11159, RIO2; RIO kinase 2 (yeast) (EC:2.7.11.1);
K07179 RIO kinase 2 [EC:2.7.11.1]
Length=474
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 0/54 (0%)
Query 11 LRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKLI 64
LRYM++ +FRVLTAVEMGMKNHE V LI IA L+ ++L L+K+KLI
Sbjct 9 LRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHKLI 62
> dre:407084 riok2, MGC193752, MGC55376, MGC77493, wu:fe48f07,
zgc:55376, zgc:77493; RIO kinase 2 (yeast) (EC:2.7.11.1); K07179
RIO kinase 2 [EC:2.7.11.1]
Length=512
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 0/60 (0%)
Query 5 RLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKLI 64
+L +LRY+++ +FRVLTAVEMGMKNHE V LI IA L+ ++L L+K+KL+
Sbjct 3 KLNVVILRYLSRDDFRVLTAVEMGMKNHEIVPVSLIASIASLKHGGCNKVLRELVKHKLL 62
> ath:AT3G51270 ATP binding / catalytic/ protein serine/threonine
kinase; K07179 RIO kinase 2 [EC:2.7.11.1]
Length=461
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 38/44 (86%), Gaps = 0/44 (0%)
Query 4 MRLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLR 47
M+L +VLRY++K +FRVLTAVEMGM+NHE V ++L+E+IA L+
Sbjct 1 MKLDVNVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVERIACLK 44
> pfa:PFD0975w PfRIO2; RIO-like kinase; K07179 RIO kinase 2 [EC:2.7.11.1]
Length=581
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 0/68 (0%)
Query 4 MRLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKL 63
M+L ++++ E+RVLTA+EMGM+NHE++S LI IA LR+ I +L LLKNKL
Sbjct 1 MKLDISCFSFLSRNEYRVLTAIEMGMRNHEYLSVSLISSIANLRKEGIVSVLKKLLKNKL 60
Query 64 IFHCSKSY 71
I H +K Y
Sbjct 61 ISHQNKKY 68
> cel:Y105E8B.3 hypothetical protein; K07179 RIO kinase 2 [EC:2.7.11.1]
Length=529
Score = 57.8 bits (138), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query 5 RLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHSIRQILSILLKNKLI 64
R+ ++RY+ FRVL AVEMGMKNHE V L+ IAG+ R + + L+ L K+ L+
Sbjct 3 RMNVSMMRYLEGDHFRVLIAVEMGMKNHEVVPLALVSAIAGIHRGGVARTLNDLCKHSLV 62
Query 65 -FHCSKSY 71
F SK +
Sbjct 63 AFERSKKF 70
> sce:YNL207W RIO2; Essential serine kinase involved in the processing
of the 20S pre-rRNA into mature 18S rRNA; has similarity
to Rio1p (EC:2.7.11.1); K07179 RIO kinase 2 [EC:2.7.11.1]
Length=425
Score = 51.6 bits (122), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query 4 MRLQADVLRYMTKGEFRVLTAVEMGMKNHEFVSAQLIEQIAGLRRHS-IRQILSILLKNK 62
M+L +RY+T +FRVL AVE G ++HE V LI QI+G+R S + +S L K
Sbjct 1 MKLDTSHMRYLTTDDFRVLQAVEQGSRSHEVVPTPLIHQISGMRSQSGTNRAISDLAKLS 60
Query 63 LI 64
LI
Sbjct 61 LI 62
> cpv:cgd1_1240 Sec14 domain containing protein
Length=461
Score = 30.8 bits (68), Expect = 0.98, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
Query 11 LRYMTKGEFRVLTAVEMGMKNHEFVSAQL 39
LR++ F V TA+EM + NHEF +L
Sbjct 181 LRFLASSRFHVQTALEMMLSNHEFRIKEL 209
Lambda K H
0.329 0.139 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2020506228
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40