bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_0178_orf1
Length=173
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_036970 SNF2 family N-terminal domain containing pro... 223 2e-58
pfa:PFF1185w Smarca-related protein 197 1e-50
tpv:TP04_0614 DNA-dependent helicase; K01509 adenosinetriphosp... 193 3e-49
bbo:BBOV_III006940 17.m07611; SNF2 family N-terminal domain co... 187 1e-47
cpv:cgd8_4620 ISWI related chromatinic protein with an apicomp... 138 8e-33
sce:YOR304W ISW2; ATP-dependent DNA translocase involved in ch... 94.7 1e-19
sce:YBR245C ISW1, SGN2; Isw1p (EC:3.6.1.-) 90.5 2e-18
cpv:cgd8_2300 brahma like protein with a HSA domain, SNF2 like... 87.8 2e-17
sce:YFR038W IRC5; Irc5p (EC:3.6.1.-) 83.2 4e-16
mmu:93761 Smarca1, 5730494M04Rik, Snf2l; SWI/SNF related, matr... 82.4 7e-16
dre:559803 novel protein similar to SWI/SNF related, matrix as... 82.0 8e-16
hsa:6594 SMARCA1, DKFZp686D1623, FLJ41547, ISWI, NURF140, SNF2... 82.0 8e-16
hsa:3070 HELLS, FLJ10339, LSH, PASG, SMARCA6; helicase, lympho... 81.6 1e-15
dre:569471 chd7, KIAA0308, fd19h06, si:ch211-197o6.2, wu:cegs2... 80.9 2e-15
mmu:15201 Hells, AI323785, E130115I21Rik, LSH, Lysh, PASG, YFK... 80.9 2e-15
cel:F37A4.8 isw-1; yeast ISW (imitation SWI) homolog family me... 80.5 3e-15
sce:YPL082C MOT1, BUR3, LPF4; Essential abundant protein invol... 80.5 3e-15
ath:AT2G28290 SYD; SYD (SPLAYED); ATPase/ chromatin binding 80.1 3e-15
tgo:TGME49_121440 SWI/SNF-related matrix-associated actin-depe... 80.1 3e-15
hsa:84181 CHD6, CHD5, KIAA1335, RIGB; chromodomain helicase DN... 79.7 4e-15
mmu:93762 Smarca5, 4933427E24Rik, D030040M08Rik, D330027N15Rik... 79.7 4e-15
hsa:8467 SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H; SWI/SNF... 79.7 4e-15
mmu:71389 Chd6, 5430439G14Rik, 6330406J24Rik; chromodomain hel... 79.7 5e-15
cpv:cgd6_3860 SNF2 helicase 78.6 9e-15
dre:568214 chd8, fi45h08, si:ch211-10e2.6, wu:fi45h08; chromod... 78.6 1e-14
xla:399165 smarca5, iswi; SWI/SNF related, matrix associated, ... 77.8 2e-14
tgo:TGME49_120300 SNF2 family N-terminal domain-containing pro... 77.8 2e-14
mmu:320790 Chd7, A730019I05Rik, Cycn, Cyn, Dz, Edy, Flo, Lda, ... 77.4 2e-14
hsa:55636 CHD7, FLJ20357, FLJ20361, IS3, KAL5, KIAA1416; chrom... 77.4 2e-14
ath:AT5G18620 CHR17; CHR17 (CHROMATIN REMODELING FACTOR17); AT... 77.0 3e-14
hsa:1107 CHD3, Mi-2a, Mi2-ALPHA, ZFH; chromodomain helicase DN... 76.6 3e-14
dre:553328 hells, cb65, im:6911667, pasg, sb:cb65, sb:cb749; h... 76.6 4e-14
mmu:269610 Chd5, 4930532L22Rik, AW060752, B230399N07Rik; chrom... 76.6 4e-14
ath:AT3G06400 CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11); ... 76.6 4e-14
dre:570753 chd6; chromodomain helicase DNA binding protein 6; ... 76.6 4e-14
mmu:216848 Chd3, 2600010P09Rik, AF020312, Chd7, MGC40857, Prp7... 76.6 4e-14
hsa:9557 CHD1L, ALC1, CHDL, FLJ22530; chromodomain helicase DN... 76.6 4e-14
hsa:26038 CHD5, DKFZp434N231, KIAA0444; chromodomain helicase ... 76.6 4e-14
dre:568230 similar to CHD3; K11642 chromodomain-helicase-DNA-b... 76.3 5e-14
dre:282615 smarca5, chunp6878, fb26d12, fb49g04, im:7146484, w... 76.3 6e-14
pfa:PF11_0053 PfSNF2L; K01509 adenosinetriphosphatase [EC:3.6.... 75.9 6e-14
dre:560622 fd12d03, wu:fb44b12; wu:fd12d03 75.9 7e-14
dre:100330764 chromodomain helicase DNA binding protein 4-like 75.9 7e-14
xla:446222 hells, lsh, nbla10143, pasg, smarca6; helicase, lym... 75.9 7e-14
mmu:67772 Chd8, 5830451P18Rik, AU015341, Duplin, HELSNF1, mKIA... 75.5 9e-14
hsa:57680 CHD8, DKFZp686N17164, HELSNF1, KIAA1564; chromodomai... 75.5 9e-14
pfa:PFB0730w DEAD/DEAH box helicase, putative; K11647 SWI/SNF-... 75.1 1e-13
mmu:107932 Chd4, 9530019N15Rik, AA617397, BC005710, D6Ertd380e... 75.1 1e-13
mmu:109151 Chd9, 1810014J18Rik, 9030205D12Rik, A330063D19Rik, ... 75.1 1e-13
ath:AT3G54280 RGD3; RGD3 (ROOT GROWTH DEFECTIVE 3); ATP bindin... 75.1 1e-13
> tgo:TGME49_036970 SNF2 family N-terminal domain containing protein
(EC:3.6.3.8 3.6.3.14)
Length=2556
Score = 223 bits (569), Expect = 2e-58, Method: Composition-based stats.
Identities = 111/178 (62%), Positives = 134/178 (75%), Gaps = 14/178 (7%)
Query 1 PHWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVF 60
PHWQCIVLDEAHRIKNASGAIRH+LDRV GNMRLLLTGTPLQNNA ELFTLINFLMPDVF
Sbjct 560 PHWQCIVLDEAHRIKNASGAIRHALDRVIGNMRLLLTGTPLQNNAAELFTLINFLMPDVF 619
Query 61 RDSLVIEQAFAQNAK-------------SAAGKSGGKQPRGRSKAAALAEMDVDTMFKQE 107
RDS VIEQAF N + +A+G+ P+ ++ A ++VD +F+QE
Sbjct 620 RDSQVIEQAFLANPQGGGAGAQAATKRDTASGRGDNISPKSQNGKKAPV-VEVDQLFRQE 678
Query 108 DLNKIRQLLDRVMLRRLKEQAIALPRKVFHDIWLPISDLSAKWYRRLLEIKSLQEEAR 165
DL IR LLDRVMLRRLKEQAIALP+K++H +W+P+S +A W RLL +++LQE +
Sbjct 679 DLEAIRNLLDRVMLRRLKEQAIALPKKLYHSVWVPLSAPAASWLERLLRVRALQEAGK 736
> pfa:PFF1185w Smarca-related protein
Length=2719
Score = 197 bits (502), Expect = 1e-50, Method: Composition-based stats.
Identities = 101/195 (51%), Positives = 126/195 (64%), Gaps = 29/195 (14%)
Query 1 PHWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVF 60
P WQCIVLDEAHRIKN SGAIRHS+DRV GNMRLLLTGTPLQNN+ ELFTLINF+ PD+F
Sbjct 459 PKWQCIVLDEAHRIKNQSGAIRHSMDRVVGNMRLLLTGTPLQNNSAELFTLINFMFPDIF 518
Query 61 RDSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAA-------------------------- 94
++S +IEQAF +++ KS
Sbjct 519 KNSEIIEQAFMNASQNNKNKSNNNNNNNNKDEKNNNNDDDDDGGGGGGGANTSGNNTSKV 578
Query 95 ---LAEMDVDTMFKQEDLNKIRQLLDRVMLRRLKEQAIALPRKVFHDIWLPISDLSAKWY 151
+ +D+ + K+EDL IR LLD++MLRRLKEQAI LP+K+FHD+WLP+ LSA WY
Sbjct 579 NVNIGNIDLKSAIKEEDLKSIRCLLDKIMLRRLKEQAITLPKKIFHDVWLPLGTLSAHWY 638
Query 152 RRLLEIKSLQEEARS 166
+RLL+I+S+ EE S
Sbjct 639 KRLLDIRSMVEEKVS 653
> tpv:TP04_0614 DNA-dependent helicase; K01509 adenosinetriphosphatase
[EC:3.6.1.3]
Length=2026
Score = 193 bits (490), Expect = 3e-49, Method: Composition-based stats.
Identities = 95/166 (57%), Positives = 121/166 (72%), Gaps = 20/166 (12%)
Query 1 PHWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVF 60
P WQC++LDEAHRIKN SGA+RHS+DR+ NMRLLLTGTPLQNNAQELFTLINF+ P++F
Sbjct 461 PRWQCLILDEAHRIKNQSGALRHSMDRIVANMRLLLTGTPLQNNAQELFTLINFMFPELF 520
Query 61 RDSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVM 120
RDS ++EQAF N K K+ R EM+ F E+L I+ LL ++M
Sbjct 521 RDSQIMEQAF--NVK--------KRIRNED------EMN----FTVEELESIKTLLSKIM 560
Query 121 LRRLKEQAIALPRKVFHDIWLPISDLSAKWYRRLLEIKSLQEEARS 166
LRRLKEQAI+LP+K+FHD+WLP+S+ + KWYR L+ I++L E S
Sbjct 561 LRRLKEQAISLPKKIFHDVWLPLSEETLKWYRTLMNIRTLMRENLS 606
> bbo:BBOV_III006940 17.m07611; SNF2 family N-terminal domain
containing protein (EC:3.6.1.-); K01509 adenosinetriphosphatase
[EC:3.6.1.3]
Length=1744
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 118/163 (72%), Gaps = 8/163 (4%)
Query 1 PHWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVF 60
P WQC++LDEAHRIKN SGA RHS+DR+ NMRLLLTGTPLQNNA ELFTLINF+ PD+F
Sbjct 447 PRWQCLILDEAHRIKNQSGAARHSMDRILANMRLLLTGTPLQNNAMELFTLINFMFPDIF 506
Query 61 RDSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVM 120
+D+ ++++ F + K RG AAALA +T F +EDL I+ LL RVM
Sbjct 507 KDTTLMDEVFRNVPR--------KHGRGAMSAAALAVASANTNFSKEDLESIKTLLSRVM 558
Query 121 LRRLKEQAIALPRKVFHDIWLPISDLSAKWYRRLLEIKSLQEE 163
LRRLKE+AI L KVFHD+W+P+S +S WYR L+ +++L ++
Sbjct 559 LRRLKEEAITLHPKVFHDVWIPLSKVSLHWYRTLMSVRTLMKD 601
> cpv:cgd8_4620 ISWI related chromatinic protein with an apicomplexan
specific domain architecture composed of 3x PHD+SNF2
ATpase+2xPHD ; K01509 adenosinetriphosphatase [EC:3.6.1.3]
Length=2140
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 106/166 (63%), Gaps = 7/166 (4%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
WQCIVLDEAHRIKN G IRHS+DRV G+MR+LLTGTPLQN+ +ELFTL+NFL PD+ +D
Sbjct 479 WQCIVLDEAHRIKNEGGRIRHSMDRVSGSMRVLLTGTPLQNSLKELFTLLNFLYPDILQD 538
Query 63 SLVIEQAFA----QNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIR---QL 115
S + E+ F + +++ S + D+D + + D +++ L
Sbjct 539 SEIFEKIFQMKDITKSANSSNSSSSGGNGNHGSDDDESIDDLDALGIKVDSKRVKLFHHL 598
Query 116 LDRVMLRRLKEQAIALPRKVFHDIWLPISDLSAKWYRRLLEIKSLQ 161
L +++LRR K+ I LP K+ DIWLP+S +WY+RLL++ ++
Sbjct 599 LQKLLLRRTKDLVIKLPDKIIRDIWLPLSPSGWQWYKRLLDVGNVH 644
> sce:YOR304W ISW2; ATP-dependent DNA translocase involved in
chromatin remodeling; ATPase component that, with Itc1p, forms
a complex required for repression of A-specific genes, INO1,
and early meiotic genes during mitotic growth (EC:3.6.1.-)
Length=1120
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 31/157 (19%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
WQ IV+DEAHRIKN A+ + RLL+TGTPLQNN EL+ L+NFL+PD+F D
Sbjct 306 WQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGD 365
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
S + ++ F QN +E D + + +Q + +L+ +LR
Sbjct 366 SELFDEWFEQNN---------------------SEQDQEIVIQQ-----LHSVLNPFLLR 399
Query 123 RLK---EQAIALPRKVFHDIWLPISDLSAKWYRRLLE 156
R+K E+++ LP K+ ++++ ++D+ +WY+ LLE
Sbjct 400 RVKADVEKSL-LP-KIETNVYVGMTDMQIQWYKSLLE 434
> sce:YBR245C ISW1, SGN2; Isw1p (EC:3.6.1.-)
Length=1129
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 30/171 (17%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ I++DEAHRIKN + L RLL+TGTPLQNN EL+ L+NFL+PD+F
Sbjct 317 NWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFS 376
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
D+ + F+ + E D D + KQ + +L +L
Sbjct 377 DAQDFDDWFSSES---------------------TEEDQDKIVKQ-----LHTVLQPFLL 410
Query 122 RRLKE--QAIALPRKVFHDIWLPISDLSAKWYRRLLEIKSLQEEARSNSAR 170
RR+K + LP+K ++++ +S + KWY+++LE K L SN ++
Sbjct 411 RRIKSDVETSLLPKKEL-NLYVGMSSMQKKWYKKILE-KDLDAVNGSNGSK 459
> cpv:cgd8_2300 brahma like protein with a HSA domain, SNF2 like
helicase and a bromo domain ; K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 2/4 [EC:3.6.4.-]
Length=1673
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDR-VQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
W+ I++DEAHR+KN + L+ + RL LTGTPLQN+ QE++ L+N+LMP +F
Sbjct 869 WEYIIVDEAHRLKNPKSKLVQILNNGFRAKHRLALTGTPLQNDLQEVWALLNYLMPSIFN 928
Query 62 DSLVIEQAFAQNAKS--AAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRV 119
S +Q F + S ++GK+GG G + +D+ + ++++ ++L
Sbjct 929 SSETFQQWFNEPLSSIKSSGKTGGGSDNG------IVPLDISEEEQLLIVDRLHKVLRPF 982
Query 120 MLRRLKEQ-AIALPRKVFHDIWLPISDLSAKWYRRL 154
+LRR K Q A +P K+ +W P+S L Y+ L
Sbjct 983 LLRREKIQVANEVPPKLEEILWCPLSGLQQYLYKEL 1018
> sce:YFR038W IRC5; Irc5p (EC:3.6.1.-)
Length=853
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ +++DE HR+KN + + L ++ + RLLLTGTPLQNN EL++L+NF+MPD+F
Sbjct 345 NWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFA 404
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
D + + F ++ + SG S + AL ++ ++ ++ ++ + +L +L
Sbjct 405 DFEIFNKWFDFDSLNLG--SG-------SNSEALNKL-INDELQKNLISNLHTILKPFLL 454
Query 122 RRLKEQAIA--LPRKVFHDIWLPISDLSAKWYR 152
RRLK+ +A LP K + I P++ K+Y+
Sbjct 455 RRLKKVVLANILPPKREYIINCPMTSAQEKFYK 487
> mmu:93761 Smarca1, 5730494M04Rik, Snf2l; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 1; K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 1
[EC:3.6.4.-]
Length=1046
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 28/155 (18%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
HW+ +V+DEAHRIKN + + + RLLLTGTPLQNN EL+ L+NFL+PDVF
Sbjct 308 HWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFN 367
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
+ + F + K+ G Q+ + ++ +L +L
Sbjct 368 SADDFDSWF--DTKNCLG-------------------------DQKLVERLHAVLKPFLL 400
Query 122 RRLKEQA-IALPRKVFHDIWLPISDLSAKWYRRLL 155
RR+K +LP K I+L +S + +WY ++L
Sbjct 401 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL 435
> dre:559803 novel protein similar to SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 5 (smarca5); K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
1 [EC:3.6.4.-]
Length=1036
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 29/155 (18%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ +V+DEAHRIKN + + RLLLTGTPLQNN EL++L+NFL+PDVF
Sbjct 264 NWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN 323
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
+ + F D + + Q+ + ++ +L +L
Sbjct 324 SASDFDSWF----------------------------DTNCLGDQKLVERLHAVLRPFLL 355
Query 122 RRLK-EQAIALPRKVFHDIWLPISDLSAKWYRRLL 155
RR+K E +LP K I+L +S + +WY R+L
Sbjct 356 RRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRIL 390
> hsa:6594 SMARCA1, DKFZp686D1623, FLJ41547, ISWI, NURF140, SNF2L,
SNF2L1, SNF2LB, SNF2LT, SWI, SWI2; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 1; K11727 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 1
[EC:3.6.4.-]
Length=1054
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 28/155 (18%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
HW+ +V+DEAHRIKN + + + RLLLTGTPLQNN EL+ L+NFL+PDVF
Sbjct 304 HWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFN 363
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
+ + F + K+ G Q+ + ++ +L +L
Sbjct 364 SADDFDSWF--DTKNCLG-------------------------DQKLVERLHAVLKPFLL 396
Query 122 RRLKEQA-IALPRKVFHDIWLPISDLSAKWYRRLL 155
RR+K +LP K I+L +S + +WY ++L
Sbjct 397 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL 431
> hsa:3070 HELLS, FLJ10339, LSH, PASG, SMARCA6; helicase, lymphoid-specific
Length=838
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 24/154 (15%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ +++DE HRIKN + L R + +LLLTGTPLQNN EL++L+NFL+PDVF
Sbjct 347 YWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFD 406
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQED---LNKIRQLLDR 118
D E F +L+E D + K+ + L+ + Q+L
Sbjct 407 DLKSFESWF--------------------DITSLSETAEDIIAKEREQNVLHMLHQILTP 446
Query 119 VMLRRLK-EQAIALPRKVFHDIWLPISDLSAKWY 151
+LRRLK + A+ +P K ++ P+S +Y
Sbjct 447 FLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFY 480
> dre:569471 chd7, KIAA0308, fd19h06, si:ch211-197o6.2, wu:cegs2051,
wu:fb37f10, wu:fb39h04, wu:fd19h06; chromodomain helicase
DNA binding protein 7; K14437 chromodomain-helicase-DNA-binding
protein 7 [EC:3.6.4.12]
Length=3094
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 31/155 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+C+++DEAHR+KN + + L + ++LLTGTPLQN +ELF+L+NFL PD F
Sbjct 1143 WRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPS 1202
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
Q F D+ T +E + K++ +L +MLR
Sbjct 1203 ESTFMQEFG---------------------------DLKT---EEQVQKLQGILKPMMLR 1232
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLLE 156
RLKE L K I + ++++ K+YR +LE
Sbjct 1233 RLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILE 1267
> mmu:15201 Hells, AI323785, E130115I21Rik, LSH, Lysh, PASG, YFK8;
helicase, lymphoid specific
Length=821
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 24/154 (15%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ +++DE HRIKN + L R + +LLLTGTPLQNN EL++L+NFL+PDVF
Sbjct 330 YWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFD 389
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQED---LNKIRQLLDR 118
D E F +L+E D + K+ + L+ + Q+L
Sbjct 390 DLKSFESWF--------------------DITSLSETAEDIIAKEREQNVLHMLHQILTP 429
Query 119 VMLRRLK-EQAIALPRKVFHDIWLPISDLSAKWY 151
+LRRLK + A+ +P K ++ P+ + +Y
Sbjct 430 FLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFY 463
> cel:F37A4.8 isw-1; yeast ISW (imitation SWI) homolog family
member (isw-1)
Length=1009
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 30/156 (19%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ I++DEAHRIKN + ++ + RLL+TGTPLQNN EL+ L+NFL+PD+F
Sbjct 253 NWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFT 312
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
S + F+ +A S + D + ++ ++L +L
Sbjct 313 SSDDFDSWFSNDAMSG---------------------NTDL------VQRLHKVLQPFLL 345
Query 122 RRLKE--QAIALPRKVFHDIWLPISDLSAKWYRRLL 155
RR+K + LP+K +++ +S + +WY ++L
Sbjct 346 RRIKSDVEKSLLPKKEVK-VYVGLSKMQREWYTKVL 380
> sce:YPL082C MOT1, BUR3, LPF4; Essential abundant protein involved
in regulation of transcription, removes Spt15p (TBP) from
DNA via its C-terminal ATPase activity, forms a complex
with TBP that binds TATA DNA with high affinity but with altered
specificity (EC:3.6.1.-)
Length=1867
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
+ VLDE H IKN+ + ++ + N RL+LTGTP+QNN EL++L +FLMP
Sbjct 1402 YNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGT 1461
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ ++ F AK A K +A LA L + + + MLR
Sbjct 1462 EKMFQERF---AKPIAASRNSKTSSKEQEAGVLA------------LEALHKQVLPFMLR 1506
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWY 151
RLKE ++ LP K+ D + + DL + Y
Sbjct 1507 RLKEDVLSDLPPKIIQDYYCELGDLQKQLY 1536
> ath:AT2G28290 SYD; SYD (SPLAYED); ATPase/ chromatin binding
Length=3543
Score = 80.1 bits (196), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
HW I++DE HRIKNAS + L + RLLLTGTPLQNN +EL+ L+NFL+P++F
Sbjct 877 HWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFN 936
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
S Q F + +S G+ + + + + +N++ Q+L +L
Sbjct 937 SSEDFSQWF-----NKPFQSNGESSAEEALLSEEENLLI--------INRLHQVLRPFVL 983
Query 122 RRLKEQAI-ALPRKV 135
RRLK + LP K+
Sbjct 984 RRLKHKVENELPEKI 998
> tgo:TGME49_121440 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin, putative (EC:2.7.11.1)
Length=1249
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 25/159 (15%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+ I++DEAHRIKN S + + RLLLTGTPLQNN +EL+ L+NFL P +F
Sbjct 442 WEYIIIDEAHRIKNESSKLAQTARLFNTKHRLLLTGTPLQNNLRELWALLNFLFPSLFSS 501
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLN-----KIRQLLD 117
S E F AG +EM T ++E+ N ++ ++L
Sbjct 502 SAEFEHLFDLTGTGEAG----------------SEM---TAEEREERNMKIVTRLHRILR 542
Query 118 RVMLRRLKEQAI-ALPRKVFHDIWLPISDLSAKWYRRLL 155
MLRR+K++ + +P K + +P+S + + Y+ LL
Sbjct 543 PFMLRRVKKEVLKEMPPKKELLLVVPLSAMQKQLYKDLL 581
> hsa:84181 CHD6, CHD5, KIAA1335, RIGB; chromodomain helicase
DNA binding protein 6 (EC:3.6.4.12); K14436 chromodomain-helicase-DNA-binding
protein 6 [EC:3.6.4.12]
Length=2715
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 35/158 (22%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
HW C+++DEAHR+KN + + L + ++LLTGTPLQN+ +ELF+L+NFL P F
Sbjct 591 HWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFP 650
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
+ F D+ T +E + K++ +L +ML
Sbjct 651 SETAFLEEFG---------------------------DLKT---EEQVKKLQSILKPMML 680
Query 122 RRLK---EQAIALPRKVFHDIWLPISDLSAKWYRRLLE 156
RRLK E+ +A ++ I + ++++ K+YR +LE
Sbjct 681 RRLKDDVEKNLAPKQETI--IEVELTNIQKKYYRAILE 716
> mmu:93762 Smarca5, 4933427E24Rik, D030040M08Rik, D330027N15Rik,
MommeD4, Snf2h; SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5; K11654
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1051
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 28/155 (18%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ +V+DEAHRIKN + + + RLLLTGTPLQNN EL++L+NFL+PDVF
Sbjct 300 NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN 359
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
+ + F N + + Q+ + ++ +L +L
Sbjct 360 SADDFDSWFDTN---------------------------NCLGDQKLVERLHMVLRPFLL 392
Query 122 RRLK-EQAIALPRKVFHDIWLPISDLSAKWYRRLL 155
RR+K + +LP K I++ +S + +WY R+L
Sbjct 393 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 427
> hsa:8467 SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H; SWI/SNF
related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5; K11654 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 5 [EC:3.6.4.-]
Length=1052
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 28/155 (18%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ +V+DEAHRIKN + + + RLLLTGTPLQNN EL++L+NFL+PDVF
Sbjct 301 NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN 360
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
+ + F N + + Q+ + ++ +L +L
Sbjct 361 SADDFDSWFDTN---------------------------NCLGDQKLVERLHMVLRPFLL 393
Query 122 RRLK-EQAIALPRKVFHDIWLPISDLSAKWYRRLL 155
RR+K + +LP K I++ +S + +WY R+L
Sbjct 394 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 428
> mmu:71389 Chd6, 5430439G14Rik, 6330406J24Rik; chromodomain helicase
DNA binding protein 6; K14436 chromodomain-helicase-DNA-binding
protein 6 [EC:3.6.4.12]
Length=2711
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 35/158 (22%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
HW C+++DEAHR+KN + + L + ++LLTGTPLQN+ +ELF+L+NFL P F
Sbjct 590 HWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFP 649
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
+ F D+ T +E + K++ +L +ML
Sbjct 650 SETAFLEEFG---------------------------DLKT---EEQVKKLQSILKPMML 679
Query 122 RRLK---EQAIALPRKVFHDIWLPISDLSAKWYRRLLE 156
RRLK E+ +A ++ I + ++++ K+YR +LE
Sbjct 680 RRLKDDVEKNLAPKQETI--IEVELTNIQKKYYRAILE 715
> cpv:cgd6_3860 SNF2 helicase
Length=1102
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 30/173 (17%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
++ +++DEAHRIKNA+ + ++ ++ RLLLTGTPLQN+ +EL++L+NFL P++F
Sbjct 314 NFHSVIIDEAHRIKNANSKLSQTVRQLNTRFRLLLTGTPLQNSLRELWSLLNFLYPEIFS 373
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
S E F G + + +A + ++L ML
Sbjct 374 SSEEFEALFEAQT-------------GEEEQSIIA--------------RFHRILRPFML 406
Query 122 RRLK-EQAIALPRKVFHDIWLPISDLSAKWYRRLLE--IKSLQEEARSNSARV 171
RR+K E I +P K +++P++++ + Y+ LL + +LQE+ R+
Sbjct 407 RRVKSEVEIDIPPKKEILLYVPLTNMQRRLYKDLLSKNVDALQEKEGGGKLRL 459
> dre:568214 chd8, fi45h08, si:ch211-10e2.6, wu:fi45h08; chromodomain
helicase DNA binding protein 8 (EC:3.6.4.12); K04494
chromodomain helicase DNA binding protein 8 [EC:3.6.4.12]
Length=2549
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 31/155 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+C+V+DEAHR+KN + + SL ++ ++LLTGTPLQN +ELF+L++FL P F
Sbjct 1016 WRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPS 1075
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ + F D+ T +E + K++ +L +MLR
Sbjct 1076 EIEFLREFG---------------------------DLKT---EEQVQKLQSILKPMMLR 1105
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLLE 156
RLKE L K I + ++D+ K+YR +LE
Sbjct 1106 RLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILE 1140
> xla:399165 smarca5, iswi; SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member
5; K11654 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1046
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 34/175 (19%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ +V+DEAHRIKN + + + RLLLTGTPLQNN EL+ L+NFL+PDVF
Sbjct 294 NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFN 353
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
S + F N + + Q+ + ++ +L +L
Sbjct 354 SSEDFDSWFDTN---------------------------NCLGDQKLVERLHMVLKPFLL 386
Query 122 RRLK---EQAIALPRKVFHDIWLPISDLSAKWYRRLL--EIKSLQEEARSNSARV 171
RR+K E+++ P+K I++ +S + +WY ++L +I L +++ R+
Sbjct 387 RRIKADVEKSLK-PKKEIK-IYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRL 439
> tgo:TGME49_120300 SNF2 family N-terminal domain-containing protein
(EC:2.7.11.1 3.2.1.3); K11647 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 2/4 [EC:3.6.4.-]
Length=1606
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query 1 PHWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVF 60
P+W+ +V+DE HR+KN+ + + RLLLTGTPLQNN EL++L+NFL+P +F
Sbjct 809 PNWRHLVVDEGHRMKNSKSKFHICVSEFRATHRLLLTGTPLQNNLAELWSLLNFLLPKIF 868
Query 61 RDSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQED-----LNKIRQL 115
+ E+ F+Q + G P G T F E+ +N++ +
Sbjct 869 SCASDFEKWFSQPFEGQGMPVEGGDPDG-----------AGTAFLNEEERLLIINRLHAV 917
Query 116 LDRVMLRRLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLLE 156
L +LRR+K+ + +P + + + + +S Y+++ E
Sbjct 918 LRPFLLRRVKKDVLKDMPERKEYLVRICLSAWQQAVYKQIQE 959
> mmu:320790 Chd7, A730019I05Rik, Cycn, Cyn, Dz, Edy, Flo, Lda,
Mt, Obt, Todo, WBE1, Whi; chromodomain helicase DNA binding
protein 7 (EC:3.6.4.12); K14437 chromodomain-helicase-DNA-binding
protein 7 [EC:3.6.4.12]
Length=2986
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 31/155 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+C+V+DEAHR+KN + + L + ++LLTGTPLQN +ELF+L++FL P F
Sbjct 1089 WRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPS 1148
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
Q F D+ T +E + K++ +L +MLR
Sbjct 1149 ETTFMQEFG---------------------------DLKT---EEQVQKLQAILKPMMLR 1178
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLLE 156
RLKE L K I + ++++ K+YR +LE
Sbjct 1179 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILE 1213
> hsa:55636 CHD7, FLJ20357, FLJ20361, IS3, KAL5, KIAA1416; chromodomain
helicase DNA binding protein 7 (EC:3.6.4.12); K14437
chromodomain-helicase-DNA-binding protein 7 [EC:3.6.4.12]
Length=2997
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 31/155 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+C+V+DEAHR+KN + + L + ++LLTGTPLQN +ELF+L++FL P F
Sbjct 1099 WRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPS 1158
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
Q F D+ T +E + K++ +L +MLR
Sbjct 1159 ETTFMQEFG---------------------------DLKT---EEQVQKLQAILKPMMLR 1188
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLLE 156
RLKE L K I + ++++ K+YR +LE
Sbjct 1189 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILE 1223
> ath:AT5G18620 CHR17; CHR17 (CHROMATIN REMODELING FACTOR17);
ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding; K11654
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1069
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 28/155 (18%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+ I++DEAHRIKN + + ++ N RLL+TGTPLQNN EL+ L+NFL+P+VF
Sbjct 316 WRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSS 375
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ ++ F + ++ +QE + ++ ++L +LR
Sbjct 376 AETFDEWFQISGEND---------------------------QQEVVQQLHKVLRPFLLR 408
Query 123 RLKEQA-IALPRKVFHDIWLPISDLSAKWYRRLLE 156
RLK LP K + + +S + ++Y+ LL+
Sbjct 409 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQ 443
> hsa:1107 CHD3, Mi-2a, Mi2-ALPHA, ZFH; chromodomain helicase
DNA binding protein 3 (EC:3.6.4.12); K11642 chromodomain-helicase-DNA-binding
protein 3 [EC:3.6.4.12]
Length=2059
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W C+V+DEAHR+KN L+ + + +LLLTGTPLQNN +ELF L+NFL P+ F +
Sbjct 936 WACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNN 995
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ FA + K++ + K+ LL MLR
Sbjct 996 LEGFLEEFAD------------------------------ISKEDQIKKLHDLLGPHMLR 1025
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLL 155
RLK +P K + + +S + K+Y+ +L
Sbjct 1026 RLKADVFKNMPAKTELIVRVELSPMQKKYYKYIL 1059
> dre:553328 hells, cb65, im:6911667, pasg, sb:cb65, sb:cb749;
helicase, lymphoid-specific
Length=853
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
HW +++DE HRIKN + + L + + +LLLTGTPLQNN EL++L+NFL+PDVF
Sbjct 357 HWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWSLLNFLLPDVFD 416
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
D E F S + AE V +Q L+ + +L +L
Sbjct 417 DLKSFESWF-----------------DISTITSDAENIVANEREQNILHMLHLILTPFLL 459
Query 122 RRLK-EQAIALPRKVFHDIWLPISDLSAKWY 151
RRLK + + +P K ++ P+++ +Y
Sbjct 460 RRLKSDVTLEVPPKKEIVVYAPLTNKQEAFY 490
> mmu:269610 Chd5, 4930532L22Rik, AW060752, B230399N07Rik; chromodomain
helicase DNA binding protein 5; K14435 chromodomain-helicase-DNA-binding
protein 5 [EC:3.6.4.12]
Length=1952
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W C+V+DEAHR+KN L+ + + +LLLTGTPLQNN +ELF L+NFL P+ F +
Sbjct 843 WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN 902
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ FA + K++ + K+ LL MLR
Sbjct 903 LEGFLEEFAD------------------------------ISKEDQIKKLHDLLGPHMLR 932
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLL 155
RLK +P K + + +S + K+Y+ +L
Sbjct 933 RLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL 966
> ath:AT3G06400 CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11);
ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding;
K11654 SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1055
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 28/155 (18%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+ I++DEAHRIKN + + ++ N RLL+TGTPLQNN EL+ L+NFL+P++F
Sbjct 311 WRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSS 370
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ ++ F + ++ +QE + ++ ++L +LR
Sbjct 371 AETFDEWFQISGEND---------------------------QQEVVQQLHKVLRPFLLR 403
Query 123 RLKEQA-IALPRKVFHDIWLPISDLSAKWYRRLLE 156
RLK LP K + + +S + ++Y+ LL+
Sbjct 404 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQ 438
> dre:570753 chd6; chromodomain helicase DNA binding protein 6;
K14436 chromodomain-helicase-DNA-binding protein 6 [EC:3.6.4.12]
Length=2699
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 35/158 (22%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+C+V+DEAHR+KN + + L + ++LLTGTPLQN+ +ELF+L+NFL P F
Sbjct 377 NWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPSQFP 436
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
+ F D+ T +E + K++ +L +ML
Sbjct 437 SETTFLEEFG---------------------------DLKT---EEQVKKLQAILKPMML 466
Query 122 RRLK---EQAIALPRKVFHDIWLPISDLSAKWYRRLLE 156
RRLK E+ +A + I + ++++ K+YR +LE
Sbjct 467 RRLKDDVEKNLAPKEETI--IEVELTNIQKKYYRAILE 502
> mmu:216848 Chd3, 2600010P09Rik, AF020312, Chd7, MGC40857, Prp7,
Prp9-1; chromodomain helicase DNA binding protein 3; K11642
chromodomain-helicase-DNA-binding protein 3 [EC:3.6.4.12]
Length=2021
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W C+V+DEAHR+KN L+ + + +LLLTGTPLQNN +ELF L+NFL P+ F +
Sbjct 929 WACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNN 988
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ FA + K++ + K+ LL MLR
Sbjct 989 LEGFLEEFAD------------------------------ISKEDQIKKLHDLLGPHMLR 1018
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLL 155
RLK +P K + + +S + K+Y+ +L
Sbjct 1019 RLKADVFKNMPAKTELIVRVELSPMQKKYYKYIL 1052
> hsa:9557 CHD1L, ALC1, CHDL, FLJ22530; chromodomain helicase
DNA binding protein 1-like (EC:3.6.4.12)
Length=897
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 28/154 (18%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W +V+DEAHR+KN S + +L LLLTGTP+QN+ QEL++L++F+ PD+F
Sbjct 168 WSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSK 227
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
V + F Q + D + E +++ +LL +LR
Sbjct 228 EEVGD--FIQRYQ-------------------------DIEKESESASELHKLLQPFLLR 260
Query 123 RLK-EQAIALPRKVFHDIWLPISDLSAKWYRRLL 155
R+K E A LP+K I+ +S L K+Y+ +L
Sbjct 261 RVKAEVATELPKKTEVVIYHGMSALQKKYYKAIL 294
> hsa:26038 CHD5, DKFZp434N231, KIAA0444; chromodomain helicase
DNA binding protein 5 (EC:3.6.4.12); K14435 chromodomain-helicase-DNA-binding
protein 5 [EC:3.6.4.12]
Length=1954
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W C+V+DEAHR+KN L+ + + +LLLTGTPLQNN +ELF L+NFL P+ F +
Sbjct 841 WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN 900
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ FA + K++ + K+ LL MLR
Sbjct 901 LEGFLEEFAD------------------------------ISKEDQIKKLHDLLGPHMLR 930
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLL 155
RLK +P K + + +S + K+Y+ +L
Sbjct 931 RLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL 964
> dre:568230 similar to CHD3; K11642 chromodomain-helicase-DNA-binding
protein 3 [EC:3.6.4.12]
Length=2063
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W C+V+DEAHR+KN L+ + + +LLLTGTPLQNN +ELF L+NFL P+ F +
Sbjct 892 WACLVVDEAHRLKNNQSKFFRRLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNN 951
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ FA + K++ + K+ LL MLR
Sbjct 952 LEGFLEEFAD------------------------------ISKEDQIKKLHDLLGPHMLR 981
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLL 155
RLK +P K + + +S + K+Y+ +L
Sbjct 982 RLKADVFKNMPAKTELIVRVELSPMQKKYYKFIL 1015
> dre:282615 smarca5, chunp6878, fb26d12, fb49g04, im:7146484,
wu:fb26d12, wu:fb49g04, zgc:158434; SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
a, member 5; K11654 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1028
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 32/157 (20%)
Query 2 HWQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFR 61
+W+ +V+DEAHRIKN + + + RLLLTGTPLQNN EL+ L+NFL+PDVF
Sbjct 277 NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFN 336
Query 62 DSLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVML 121
S + F N + G DT + ++ +L +L
Sbjct 337 SSEDFDAWFDTN--NCLG---------------------DTKL----VERLHTVLRPFLL 369
Query 122 RRLK---EQAIALPRKVFHDIWLPISDLSAKWYRRLL 155
RR+K E+++ LP+K I++ +S + +WY ++L
Sbjct 370 RRIKADVEKSL-LPKKEIK-IYVGLSKMQREWYTKIL 404
> pfa:PF11_0053 PfSNF2L; K01509 adenosinetriphosphatase [EC:3.6.1.3]
Length=1426
Score = 75.9 bits (185), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 28/156 (17%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W +V+DEAHRIKN + S+ ++ RLL+TGTPL NN +EL++L+NFLMP +F +
Sbjct 443 WFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDN 502
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
S + F ++++ + + E + ++ +L MLR
Sbjct 503 SEEFDNLF-----------------------NISKISTNDNKQSEIITQLHTILKPFMLR 539
Query 123 RLK---EQAIALPRKVFHDIWLPISDLSAKWYRRLL 155
RLK EQ++ R+++ I++ +S L K Y +L
Sbjct 540 RLKVEVEQSLPPKREIY--IFVGMSKLQKKLYSDIL 573
> dre:560622 fd12d03, wu:fb44b12; wu:fd12d03
Length=1953
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W C+V+DEAHR+KN L+ +LLLTGTPLQNN +ELF L+NFL P+ F +
Sbjct 877 WACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNN 936
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ FA A K++ + K+ +L MLR
Sbjct 937 LEGFLEEFADIA------------------------------KEDQIKKLHDMLGPHMLR 966
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLL 155
RLK +P K + + +S + K+Y+ +L
Sbjct 967 RLKADVFKHMPSKTELIVRVELSPMQKKYYKYIL 1000
> dre:100330764 chromodomain helicase DNA binding protein 4-like
Length=824
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W C+V+DEAHR+KN L+ +LLLTGTPLQNN +ELF L+NFL P+ F +
Sbjct 617 WACLVVDEAHRLKNNQSKFFRILNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFSN 676
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ FA A K++ + K+ +L MLR
Sbjct 677 LEGFLEEFADIA------------------------------KEDQIKKLHDMLGPHMLR 706
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLL 155
RLK +P K + + +S + K+Y+ +L
Sbjct 707 RLKADVFKHMPSKTELIVRVELSPMQKKYYKFIL 740
> xla:446222 hells, lsh, nbla10143, pasg, smarca6; helicase, lymphoid-specific
Length=838
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 18/150 (12%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+ ++LDE HRIKN + + L + + +LLLTGTPLQNN EL++L+NFL+PDVF D
Sbjct 346 WKYMILDEGHRIKNMNCRLIQELKLFRSDNKLLLTGTPLQNNLSELWSLLNFLLPDVFDD 405
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
E F + G S+ AA V +Q L+ + Q+L +LR
Sbjct 406 LRSFESWFDIS--------------GISQNAADI---VANEREQNILHMLHQILTPFLLR 448
Query 123 RLK-EQAIALPRKVFHDIWLPISDLSAKWY 151
RLK + + +P K ++ P++ +Y
Sbjct 449 RLKCDVTLEVPPKREVIVYAPLTKKQETFY 478
> mmu:67772 Chd8, 5830451P18Rik, AU015341, Duplin, HELSNF1, mKIAA1564;
chromodomain helicase DNA binding protein 8 (EC:3.6.4.12);
K04494 chromodomain helicase DNA binding protein 8 [EC:3.6.4.12]
Length=2582
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 31/155 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+C+++DEAHR+KN + + SL + ++LLTGTPLQN +ELF+L++FL P F
Sbjct 944 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1003
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
E F + D + +E + K++ +L +MLR
Sbjct 1004 ----ESEFLK--------------------------DFGDLKTEEQVQKLQAILKPMMLR 1033
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLLE 156
RLKE L K I + ++++ K+YR +LE
Sbjct 1034 RLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILE 1068
> hsa:57680 CHD8, DKFZp686N17164, HELSNF1, KIAA1564; chromodomain
helicase DNA binding protein 8 (EC:3.6.4.12); K04494 chromodomain
helicase DNA binding protein 8 [EC:3.6.4.12]
Length=2581
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 31/155 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+C+++DEAHR+KN + + SL + ++LLTGTPLQN +ELF+L++FL P F
Sbjct 942 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1001
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
E F + D + +E + K++ +L +MLR
Sbjct 1002 ----ESEFLK--------------------------DFGDLKTEEQVQKLQAILKPMMLR 1031
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLLE 156
RLKE L K I + ++++ K+YR +LE
Sbjct 1032 RLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILE 1066
> pfa:PFB0730w DEAD/DEAH box helicase, putative; K11647 SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
subfamily A member 2/4 [EC:3.6.4.-]
Length=1997
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 25/157 (15%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W IV+DE HR+KN L + R+LLTGTPLQNN EL++L+NFL+P +F
Sbjct 1006 WNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSS 1065
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQED----LNKIRQLLDR 118
+ E+ F ++ + E DV +E+ +N++ +L
Sbjct 1066 CVDFEKWFVKSLHN--------------------EKDVYEHITEEEQLLIINRLHSVLLP 1105
Query 119 VMLRRLKEQAI-ALPRKVFHDIWLPISDLSAKWYRRL 154
MLRR+K+ + +LP+K ++I + +S Y+++
Sbjct 1106 FMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQI 1142
> mmu:107932 Chd4, 9530019N15Rik, AA617397, BC005710, D6Ertd380e,
KIAA4075, MGC11769, Mi-2beta, mKIAA4075; chromodomain helicase
DNA binding protein 4 (EC:3.6.4.12); K11643 chromodomain-helicase-DNA-binding
protein 4 [EC:3.6.4.12]
Length=1915
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W C+++DEAHR+KN L+ +LLLTGTPLQNN +ELF L+NFL P+ F +
Sbjct 860 WACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHN 919
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
+ FA A K++ + K+ +L MLR
Sbjct 920 LEGFLEEFADIA------------------------------KEDQIKKLHDMLGPHMLR 949
Query 123 RLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLL 155
RLK +P K + + +S + K+Y+ +L
Sbjct 950 RLKADVFKNMPSKTELIVRVELSPMQKKYYKYIL 983
> mmu:109151 Chd9, 1810014J18Rik, 9030205D12Rik, A330063D19Rik,
AD013, PRIC320, mKIAA0308; chromodomain helicase DNA binding
protein 9 (EC:3.6.4.12); K14438 chromodomain-helicase-DNA-binding
protein 9 [EC:3.6.4.12]
Length=2869
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 31/155 (20%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W+C+++DEAHR+KN + + L + ++LLTGTPLQN +ELF+L++FL P F
Sbjct 990 WRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPS 1049
Query 63 SLVIEQAFAQNAKSAAGKSGGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVMLR 122
Q F D+ T +E + K++ +L +MLR
Sbjct 1050 ESTFMQEFG---------------------------DLKT---EEQVQKLQAILKPMMLR 1079
Query 123 RLKEQA-IALPRKVFHDIWLPISDLSAKWYRRLLE 156
RLKE L K I + ++++ K+YR +LE
Sbjct 1080 RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILE 1114
> ath:AT3G54280 RGD3; RGD3 (ROOT GROWTH DEFECTIVE 3); ATP binding
/ DNA binding / binding / helicase/ nucleic acid binding
Length=2038
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 20/163 (12%)
Query 3 WQCIVLDEAHRIKNASGAIRHSLDRVQGNMRLLLTGTPLQNNAQELFTLINFLMPDVFRD 62
W +LDE H IKNA I ++ +++ RL+L+GTP+QNN EL++L +FLMP
Sbjct 1571 WNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGF--- 1627
Query 63 SLVIEQAFAQNAKSAAGKS--GGKQPRGRSKAAALAEMDVDTMFKQEDLNKIRQLLDRVM 120
L E+ F +++ GK + P+ +K A + ++ + KQ + +
Sbjct 1628 -LGTERQF----QASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQ---------VMPFL 1673
Query 121 LRRLKEQAIA-LPRKVFHDIWLPISDLSAKWYRRLLEIKSLQE 162
LRR KE+ ++ LP K+ D + +S + K Y + + QE
Sbjct 1674 LRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQE 1716
Lambda K H
0.321 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4406352944
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40