bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_0043_orf1
Length=145
Score E
Sequences producing significant alignments: (Bits) Value
xla:399086 tbpl1, MGC84998, tlf; TBP-like 1; K03120 transcript... 118 5e-27
mmu:237336 Tbpl1, 4732475G08, AW011832, AW491032, D18347, STD,... 118 5e-27
hsa:9519 TBPL1, MGC:8389, MGC:9620, STUD, TLF, TLP, TRF2; TBP-... 118 5e-27
dre:403035 tbpl1, MGC92340, tlf, tlp, trf, trf2, trp, zgc:9234... 117 1e-26
cel:F39H11.2 tlf-1; TBP-Like Factor family member (tlf-1); K03... 76.6 2e-14
ath:AT1G55520 TBP2; TBP2 (TATA BINDING PROTEIN 2); DNA binding... 75.5 5e-14
sce:YER148W SPT15, BTF1, TBP1; Spt15p; K03120 transcription in... 73.9 2e-13
cel:T20B12.2 tbp-1; TATA-Binding Protein family member (tbp-1)... 72.4 4e-13
dre:368882 tbp, fd20h06, si:zc101n13.2, wu:fd20h06, zgc:66213;... 70.9 1e-12
xla:399465 tbp-a, MGC132200, TBP, gtf2d, gtf2d1, sca17, tfiid,... 70.9 1e-12
mmu:21374 Tbp, GTF2D1, Gtf2d, SCA17, TFIID; TATA box binding p... 70.9 1e-12
xla:503680 tbp-b, gtf2d, gtf2d1, sca17, tbp, tfiid, xtbp; TATA... 70.5 2e-12
dre:407713 tbpl2, tbp2, trf3; TATA box binding protein like 2;... 70.5 2e-12
hsa:6908 TBP, GTF2D, GTF2D1, HDL4, MGC117320, MGC126054, MGC12... 70.5 2e-12
xla:387333 tbpl2, tbp2, trf3; TATA box binding protein like 2;... 68.9 5e-12
hsa:387332 TBPL2, TBP2, TRF3; TATA box binding protein like 2;... 67.4 2e-11
mmu:227606 Tbpl2, Gm348, Trf3; TATA box binding protein like 2... 67.0 2e-11
ath:AT3G13445 TBP1; TBP1 (TATA BINDING PROTEIN 1); DNA binding... 62.8 3e-10
tpv:TP01_0630 transcription initiation factor TFIID; K03120 tr... 59.3 4e-09
cpv:cgd8_2030 TATA-box factor binding protein ; K03120 transcr... 56.6 2e-08
pfa:PFE0305w transcription initiation factor TFiid, TATA-bindi... 56.6 3e-08
tgo:TGME49_058680 TATA-box binding protein, putative ; K03120 ... 49.3 4e-06
bbo:BBOV_IV002970 21.m02732; TATA-box binding protein; K03120 ... 46.2 4e-05
dre:368917 adam8a, MGC64059, adam8, reprolysin, si:zc217g15.7,... 31.6 0.80
dre:565984 similar to Protein-glutamine gamma-glutamyltransfer... 31.2 1.2
mmu:17281 Fyco1, 2810409M01Rik, Mem2, RUFY3, ZFYVE7; FYVE and ... 30.8 1.4
hsa:57505 AARS2, AARSL, KIAA1270, MT-ALARS, MTALARS, bA444E17.... 30.4 1.8
tgo:TGME49_091080 TATA-box binding protein, putative 29.3 4.0
mmu:224805 Aars2, Aarsl, AlaRS, Gm89, MGC69820; alanyl-tRNA sy... 29.3 4.3
tgo:TGME49_059860 hypothetical protein 28.5 8.0
bbo:BBOV_II002380 18.m06194; hypothetical protein 28.1 9.8
> xla:399086 tbpl1, MGC84998, tlf; TBP-like 1; K03120 transcription
initiation factor TFIID TATA-box-binding protein
Length=186
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 71/93 (76%), Gaps = 0/93 (0%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF+VKF +++VVNVL C +PF I++ EF+ ++R ASYE ELHP YRIK L+A L+
Sbjct 91 LGFQVKFTEFKVVNVLAVCTMPFEIRLNEFTKQNRPHASYEPELHPAVCYRIKSLRATLQ 150
Query 61 IFQTGSITITAPSIQNVQLAVEQIYPLVYEFRK 93
IF TGSIT+T P +++V A+EQIYP V+E RK
Sbjct 151 IFSTGSITVTGPDVKSVASAIEQIYPFVFESRK 183
> mmu:237336 Tbpl1, 4732475G08, AW011832, AW491032, D18347, STD,
TLF, TRF2, TRP, Tlp; TATA box binding protein-like 1; K03120
transcription initiation factor TFIID TATA-box-binding protein
Length=186
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 0/93 (0%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF+V F ++VVNVL C +PF I++PEF+ +R ASYE ELHP YRIK L+A L+
Sbjct 91 LGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQ 150
Query 61 IFQTGSITITAPSIQNVQLAVEQIYPLVYEFRK 93
IF TGSIT+T P+++ V AVEQIYP V+E RK
Sbjct 151 IFSTGSITVTGPNVKAVATAVEQIYPFVFESRK 183
> hsa:9519 TBPL1, MGC:8389, MGC:9620, STUD, TLF, TLP, TRF2; TBP-like
1; K03120 transcription initiation factor TFIID TATA-box-binding
protein
Length=186
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 0/93 (0%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF+V F ++VVNVL C +PF I++PEF+ +R ASYE ELHP YRIK L+A L+
Sbjct 91 LGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQ 150
Query 61 IFQTGSITITAPSIQNVQLAVEQIYPLVYEFRK 93
IF TGSIT+T P+++ V AVEQIYP V+E RK
Sbjct 151 IFSTGSITVTGPNVKAVATAVEQIYPFVFESRK 183
> dre:403035 tbpl1, MGC92340, tlf, tlp, trf, trf2, trp, zgc:92340;
TBP-like 1; K03120 transcription initiation factor TFIID
TATA-box-binding protein
Length=186
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 74/93 (79%), Gaps = 0/93 (0%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
+GF+V+F ++VVNVL C +PF I++ EF+ +R +ASYE ELHP A+YRIK L++ ++
Sbjct 91 MGFKVRFSDFKVVNVLAVCSMPFQIRLIEFTKNNRPIASYEPELHPAASYRIKNLRSTVQ 150
Query 61 IFQTGSITITAPSIQNVQLAVEQIYPLVYEFRK 93
+F TG+IT+T P++Q+V AVE+IYPL++E RK
Sbjct 151 VFSTGNITVTGPNVQSVASAVEEIYPLLFECRK 183
> cel:F39H11.2 tlf-1; TBP-Like Factor family member (tlf-1); K03120
transcription initiation factor TFIID TATA-box-binding
protein
Length=505
Score = 76.6 bits (187), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query 4 RVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLKIFQ 63
RV YRV NVL CRLPFGIK+ E + ++ ++YE EL G +R KA L+I
Sbjct 352 RVSIRNYRVNNVLATCRLPFGIKIEEVAAKYPSESTYEPELSVGLVWRSVTPKATLRIHT 411
Query 64 TGSITIT-APSIQNVQLAVEQIYPLVYEFR 92
TGSIT+T A S +V + +IYP+V EFR
Sbjct 412 TGSITVTGAQSEADVLEVLSKIYPIVLEFR 441
> ath:AT1G55520 TBP2; TBP2 (TATA BINDING PROTEIN 2); DNA binding
/ RNA polymerase II transcription factor/ TATA-binding protein
binding; K03120 transcription initiation factor TFIID
TATA-box-binding protein
Length=200
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ + H +SYE EL PG YR+K K VL
Sbjct 104 LGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLL 163
Query 61 IFQTGSITITAPSI-QNVQLAVEQIYPLVYEFRK 93
IF +G I IT + + A E IYP++ EFRK
Sbjct 164 IFVSGKIVITGAKMREETYTAFENIYPVLREFRK 197
> sce:YER148W SPT15, BTF1, TBP1; Spt15p; K03120 transcription
initiation factor TFIID TATA-box-binding protein
Length=240
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
+GF KF +++ N++G+C + F I++ + H +SYE EL PG YR+ + K VL
Sbjct 146 IGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLL 205
Query 61 IFQTGSITIT-APSIQNVQLAVEQIYPLVYEFRK 93
IF +G I +T A + + A E IYP++ EFRK
Sbjct 206 IFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRK 239
> cel:T20B12.2 tbp-1; TATA-Binding Protein family member (tbp-1);
K03120 transcription initiation factor TFIID TATA-box-binding
protein
Length=340
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF+ KF ++ V N++G+C + F I++ H + ++YE EL PG YR+ + + VL
Sbjct 247 LGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHSQFSTYEPELFPGLIYRMVKPRVVLL 306
Query 61 IFQTGSITIT-APSIQNVQLAVEQIYPLVYEFRK 93
IF +G + IT A + +++ A QIYP++ F+K
Sbjct 307 IFVSGKVVITGAKTKRDIDEAFGQIYPILKGFKK 340
> dre:368882 tbp, fd20h06, si:zc101n13.2, wu:fd20h06, zgc:66213;
TATA box binding protein; K03120 transcription initiation
factor TFIID TATA-box-binding protein
Length=302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ H++ +SYE EL PG YR+ + + VL
Sbjct 207 LGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLL 266
Query 61 IFQTGSITITAPSIQ-NVQLAVEQIYPLVYEFRK 93
IF +G + +T ++ + A E IYP++ FRK
Sbjct 267 IFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRK 300
> xla:399465 tbp-a, MGC132200, TBP, gtf2d, gtf2d1, sca17, tfiid,
tfiidtau, xtbp; TATA box binding protein; K03120 transcription
initiation factor TFIID TATA-box-binding protein
Length=297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ H++ +SYE EL PG YR+ + + VL
Sbjct 202 LGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLL 261
Query 61 IFQTGSITITAPSIQ-NVQLAVEQIYPLVYEFRK 93
IF +G + +T ++ + A E IYP++ FRK
Sbjct 262 IFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 295
> mmu:21374 Tbp, GTF2D1, Gtf2d, SCA17, TFIID; TATA box binding
protein; K03120 transcription initiation factor TFIID TATA-box-binding
protein
Length=316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ H++ +SYE EL PG YR+ + + VL
Sbjct 221 LGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLL 280
Query 61 IFQTGSITITAPSIQ-NVQLAVEQIYPLVYEFRK 93
IF +G + +T ++ + A E IYP++ FRK
Sbjct 281 IFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 314
> xla:503680 tbp-b, gtf2d, gtf2d1, sca17, tbp, tfiid, xtbp; TATA
box binding protein; K03120 transcription initiation factor
TFIID TATA-box-binding protein
Length=296
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ H++ +SYE EL PG YR+ + + VL
Sbjct 201 LGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLL 260
Query 61 IFQTGSITITAPSIQ-NVQLAVEQIYPLVYEFRK 93
IF +G + +T ++ + A E IYP++ FRK
Sbjct 261 IFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 294
> dre:407713 tbpl2, tbp2, trf3; TATA box binding protein like
2; K03120 transcription initiation factor TFIID TATA-box-binding
protein
Length=312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ H++ +SYE EL PG YR+ + + VL
Sbjct 218 LGFPAKFLDFKIQNMVGSCDVCFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLL 277
Query 61 IFQTGSITIT-APSIQNVQLAVEQIYPLVYEFRK 93
IF +G + +T A + A E IYP++ FRK
Sbjct 278 IFVSGKVVLTGAKERSEIYEAFENIYPILKGFRK 311
> hsa:6908 TBP, GTF2D, GTF2D1, HDL4, MGC117320, MGC126054, MGC126055,
SCA17, TFIID; TATA box binding protein; K03120 transcription
initiation factor TFIID TATA-box-binding protein
Length=319
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ H++ +SYE EL PG YR+ + + VL
Sbjct 224 LGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLL 283
Query 61 IFQTGSITITAPSIQ-NVQLAVEQIYPLVYEFRK 93
IF +G + +T ++ + A E IYP++ FRK
Sbjct 284 IFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 317
> xla:387333 tbpl2, tbp2, trf3; TATA box binding protein like
2; K03120 transcription initiation factor TFIID TATA-box-binding
protein
Length=320
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ H++ +SYE EL PG YR+ + + VL
Sbjct 225 LGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLL 284
Query 61 IFQTGSITIT-APSIQNVQLAVEQIYPLVYEFRK 93
IF +G + +T A + A E IYP++ F+K
Sbjct 285 IFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 318
> hsa:387332 TBPL2, TBP2, TRF3; TATA box binding protein like
2; K03120 transcription initiation factor TFIID TATA-box-binding
protein
Length=375
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF +F +++ N++G+C + F I++ H++ +SYE EL PG YR+ + + VL
Sbjct 281 LGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLL 340
Query 61 IFQTGSITIT-APSIQNVQLAVEQIYPLVYEFRK 93
IF +G + +T A + A E IYP++ F+K
Sbjct 341 IFVSGKVVLTGAKERSEIYEAFENIYPILKGFKK 374
> mmu:227606 Tbpl2, Gm348, Trf3; TATA box binding protein like
2; K03120 transcription initiation factor TFIID TATA-box-binding
protein
Length=350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKL-ASYELELHPGATYRIKELKAVL 59
LGF V+F +++ N++G+C + F I++ + HR+ +SYE EL PG Y++ + + VL
Sbjct 255 LGFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQFSSSYEPELFPGLIYKMVKPQVVL 314
Query 60 KIFQTGSITIT-APSIQNVQLAVEQIYPLVYEFRK 93
IF +G + +T A + A E +YP++ F+K
Sbjct 315 LIFASGKVVLTGAKERSEIYEAFENMYPILESFKK 349
> ath:AT3G13445 TBP1; TBP1 (TATA BINDING PROTEIN 1); DNA binding
/ RNA polymerase II transcription factor/ binding; K03120
transcription initiation factor TFIID TATA-box-binding protein
Length=196
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 0/74 (0%)
Query 1 LGFRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLK 60
LGF KF +++ N++G+C + F I++ + H +SYE EL PG YR+K K VL
Sbjct 104 LGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLL 163
Query 61 IFQTGSITITAPSI 74
IF +G I IT +
Sbjct 164 IFVSGKIVITGAKV 177
> tpv:TP01_0630 transcription initiation factor TFIID; K03120
transcription initiation factor TFIID TATA-box-binding protein
Length=222
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query 2 GFRVKFCQYRVVNVLG--ACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIK---ELK 56
G +KF +++ N++ +C +P ++V FS EH+ L +YE E G YR + E +
Sbjct 127 GLDLKFNNFKIENIIATFSCNVPIRLEV--FSQEHKDLCNYEPEFFAGLVYRCRINEESE 184
Query 57 AVLKIFQTGSITIT-APSIQNVQLAVEQIYPLVYEFR 92
AVL IF +G++ IT S Q +Q + +YP++++++
Sbjct 185 AVLLIFVSGNVIITGCKSAQEIQYVFKTMYPILHQYQ 221
> cpv:cgd8_2030 TATA-box factor binding protein ; K03120 transcription
initiation factor TFIID TATA-box-binding protein
Length=249
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query 2 GF-RVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIK----ELK 56
GF +VKF +++ N++ F I++ + +HR +YE EL PG YR K
Sbjct 152 GFPKVKFTNFKMENIIATADCKFPIRLEGLAYDHRDFCNYEPELFPGLVYRYHPDNSPTK 211
Query 57 AVLKIFQTGSITIT-APSIQNVQLAVEQIYPLVYEFRK 93
AVL +F +G + +T + Q + + IYP++ ++RK
Sbjct 212 AVLLLFVSGKVIVTGCKNYQEICNVFDNIYPVLCQYRK 249
> pfa:PFE0305w transcription initiation factor TFiid, TATA-binding
protein; K03120 transcription initiation factor TFIID TATA-box-binding
protein
Length=327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query 4 RVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIK---ELKAVLK 60
+VKFC +++ N++ + I++ + +H++ +YE EL G YR K LK+V+
Sbjct 234 KVKFCNFKIENIIASANCNIPIRLEVLAHDHKEYCNYEPELFAGLVYRYKPTSNLKSVIL 293
Query 61 IFQTGSITIT-APSIQNVQLAVEQIYPLVYEFR 92
IF +G I IT S+ + + IY ++ +++
Sbjct 294 IFVSGKIIITGCKSVNKLYTVFQDIYNVLIQYK 326
> tgo:TGME49_058680 TATA-box binding protein, putative ; K03120
transcription initiation factor TFIID TATA-box-binding protein
Length=549
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query 6 KFC--QYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYR---IKELKAVLK 60
K C +++ NV+ + +++ + EH++ +SYE EL G YR LKAVL
Sbjct 456 KLCLRDFKIENVVASADCGVPVRLEGLAFEHKEFSSYEPELFSGLVYRYNPTASLKAVLL 515
Query 61 IFQTGSITIT-APSIQNVQLAVEQIYPLVYEFRK 93
+F +G + IT S+ V E +YP++ + +
Sbjct 516 VFVSGKVVITGCKSLSEVNHVFESLYPVLVRYHQ 549
> bbo:BBOV_IV002970 21.m02732; TATA-box binding protein; K03120
transcription initiation factor TFIID TATA-box-binding protein
Length=277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query 1 LGFRVKFCQYRVVNVLGA--CRLPFGIKVPEFSTEHRKLASYELELHPGATYRIK---EL 55
LG ++F +++ N++ C +P I++ EH+ +YE E+ G YRI +
Sbjct 181 LGGGIQFNDFKIENIIATFNCNVP--IRLERLYEEHKLFCNYEPEIFAGLVYRIAIPCKS 238
Query 56 KAVLKIFQTGSITIT-APSIQNVQLAVEQIYPLVYEFR 92
+AVL +F +G++ +T S +++ L ++ P++ EF+
Sbjct 239 EAVLLVFVSGNVIVTGCRSPEDIYLIYRRMAPILCEFK 276
> dre:368917 adam8a, MGC64059, adam8, reprolysin, si:zc217g15.7,
zgc:64059; a disintegrin and metalloproteinase domain 8a;
K06540 disintegrin and metalloproteinase domain-containing
protein 8 [EC:3.4.24.-]
Length=843
Score = 31.6 bits (70), Expect = 0.80, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 0/33 (0%)
Query 88 VYEFRKPRPQLAINSSTSAAAASSAAGGGNNSP 120
+ EFRK RPQ I+SS+ + G NSP
Sbjct 681 ITEFRKKRPQKGIHSSSGQCNPAFQPGSAKNSP 713
> dre:565984 similar to Protein-glutamine gamma-glutamyltransferase
5 (Transglutaminase-5) (TGase 5) (Transglutaminase X)
(TGase X) (TGX) (TG(X))
Length=724
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query 5 VKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELH-PGATYRIKELKAVLKIFQ 63
+ F +Y++ VL + + V + ++ R LAS E +H P + +I+ ++ Q
Sbjct 583 ISFNEYKLKQVLEDYLVNLAVVVEDVKSQERVLASEEFNIHSPALSIQIQNENVIVNSPQ 642
Query 64 TGSITITAP 72
+T T P
Sbjct 643 VAMVTFTNP 651
> mmu:17281 Fyco1, 2810409M01Rik, Mem2, RUFY3, ZFYVE7; FYVE and
coiled-coil domain containing 1
Length=1438
Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query 9 QYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRIK----ELKAVLKI 61
Q +++ VL A + G+ +P+ +T+ L+ +LE+H G R++ +L+A L++
Sbjct 704 QIQLIEVLSAEKGQQGLSLPQVNTDQLALSQAQLEIHQGEAQRLQNEVVDLQAKLQV 760
> hsa:57505 AARS2, AARSL, KIAA1270, MT-ALARS, MTALARS, bA444E17.1;
alanyl-tRNA synthetase 2, mitochondrial (putative) (EC:6.1.1.7);
K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Length=985
Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query 72 PSIQNVQLAVEQIYPLVYEFRKPRPQLAINSSTSAAAASSAAGGGNNSPEGVGDDLT--- 128
PS+ V + Q P+ PR ++A + + AGG +N E VG DL+
Sbjct 70 PSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDLSHHT 129
Query 129 -IDELRNYSDGGD 140
+ L N++ GG+
Sbjct 130 FFEMLGNWAFGGE 142
> tgo:TGME49_091080 TATA-box binding protein, putative
Length=288
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 40/128 (31%)
Query 3 FRVKFCQYRVVNVLGACRLPFGIKVPEFSTEHRKLASYELELHPGATYRI---------- 52
++V ++RV N+LG+ I + + YE E PGA +I
Sbjct 153 YKVSMTRFRVSNILGSYTFSSPISLHALAALRELHVDYEPERFPGARVKITIPKAIDTNS 212
Query 53 -----------------------------KELKAVLKIFQTGSITIT-APSIQNVQLAVE 82
KE L++F TG++T+T S+++++ A++
Sbjct 213 DANETEKAATGGAWASQTGSSQTAQDSKGKEEVVTLQLFSTGNVTLTGGRSVESMEYALQ 272
Query 83 QIYPLVYE 90
+ P + +
Sbjct 273 CVLPFLQQ 280
> mmu:224805 Aars2, Aarsl, AlaRS, Gm89, MGC69820; alanyl-tRNA
synthetase 2, mitochondrial (putative) (EC:6.1.1.7); K01872
alanyl-tRNA synthetase [EC:6.1.1.7]
Length=980
Score = 29.3 bits (64), Expect = 4.3, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query 72 PSIQNVQLAVEQIYPLVYEFRKPRPQLAINSSTSAAAASSAAGGGNNSPEGVGDDLT--- 128
PS+ V + Q P+ PR ++A + AGG +N E VG DL+
Sbjct 65 PSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVVNSQKCVRAGGRHNDLEDVGRDLSHHT 124
Query 129 -IDELRNYSDGGD 140
+ L N++ GG+
Sbjct 125 FFEMLGNWAFGGE 137
> tgo:TGME49_059860 hypothetical protein
Length=2085
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Query 90 EFRK-------PRPQLAINSSTSAAAASSAAGGGNNSPEGVGDD 126
EFR+ P P L N+STSAA + AG +PE GD+
Sbjct 783 EFRRDGNPCSPPSPPLGENASTSAAVGTEYAGLATATPESGGDE 826
> bbo:BBOV_II002380 18.m06194; hypothetical protein
Length=371
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query 23 FGIKVPEFSTEHRKLASYELELHPGATYRIKELKAVLKIFQTG 65
F I V ST+H YE HPG I++ K V +I G
Sbjct 256 FNIPV---STDHTSPLIYETVYHPGTVPLIQDFKIVFRITNVG 295
Lambda K H
0.316 0.134 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2807590228
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40