bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_3380_orf1 Length=99 Score E Sequences producing significant alignments: (Bits) Value Hs7656952 38.9 0.002 At1g30070 38.9 0.002 7290732 37.0 0.009 Hs5174457 29.6 1.6 CE10732 28.9 2.7 ECU01g1060 28.1 3.8 Hs18558101 28.1 4.2 > Hs7656952 Length=228 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%) Query 12 LRSDLEELESLLKVARRPSIIRMLTEQCQRPRDQIQ---------EAEKL--EKCAAQGR 60 L+ DLEE++ LL+ A R + LT + + +I+ +AE L EK AA Sbjct 6 LQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVA 65 Query 61 PTAEVFNT-IDRFAWDQTPALVKVYVHLDGLNDL 93 P + I + WDQ+ VK+Y+ L G++ + Sbjct 66 PITTGYTVKISNYGWDQSDKFVKIYITLTGVHQV 99 > At1g30070 Length=222 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 30/108 (27%) Query 6 MENTLGLRSDLEELESLLKVARRPSIIRMLTEQCQRPRDQIQEAEKLEKCA--AQGRPTA 63 M +GL DLEEL L +A+RP ++ ++ + I EKL A + +P Sbjct 1 MAEEVGL--DLEELRQLQNIAKRPRVLNLINSE-------ISNLEKLRDSAVSSNAKPKV 51 Query 64 EV-------------------FNTIDRFAWDQTPALVKVYVHLDGLND 92 V + T+ F+WDQ VK+Y+ L+G+++ Sbjct 52 PVTVPAPVSSSGKPVSSSALNYVTLGTFSWDQDNDKVKMYISLEGVDE 99 > 7290732 Length=230 Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Query 12 LRSDLEELESLLKVARRPSIIRMLTEQCQRPRDQIQEAEKLEKCAAQGRPTAE-----VF 66 L+SD+ EL + L+ A+ + +LT +I E K AA+ + T Sbjct 6 LKSDVAELAAFLQQAKGARVKDVLTTAKAEAEREIVNLELKAKIAAERQATGSSEAKRYL 65 Query 67 NTIDRFAWDQTPALVKVYVHLDGL 90 + + + WDQ+ VK+++ L+G+ Sbjct 66 HELTDYGWDQSAKFVKLFITLNGV 89 > Hs5174457 Length=642 Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 7/59 (11%) Query 5 AMENTLGLRSDLEELESLLKVARRPSIIRMLTEQCQRPRD----QIQEAEKL-EKCAAQ 58 A+ +GL LE+L +++ ++R +R L E+ Q+ D +I+EAE+ EKCA++ Sbjct 475 ALNKKMGLEDTLEQLNAMITESKRS--VRTLKEEVQKLDDLYQQKIKEAEEEDEKCASE 531 > CE10732 Length=974 Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 0/41 (0%) Query 2 SELAMENTLGLRSDLEELESLLKVARRPSIIRMLTEQCQRP 42 +EL + + +RS ++E +L + P+I E CQRP Sbjct 61 NELHISRVVNMRSFVKEANNLSNSQKNPNIFEPKNEVCQRP 101 > ECU01g1060 Length=696 Score = 28.1 bits (61), Expect = 3.8, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query 19 LESLLKVARRPS-IIRMLTEQCQRPRDQIQE----AEKLEKCAAQGRPTAEVFNTIDRFA 73 LE+ + +R+ S + + E RP QI E A L + G T+++ T+DRF+ Sbjct 65 LETFRESSRQASDFLIAIAEPMSRPL-QIHEFQITAYSLYAAVSVGLTTSDIIETLDRFS 123 Query 74 WDQTPALVKVYV 85 + P V+V++ Sbjct 124 KNFLPRSVRVFI 135 > Hs18558101 Length=355 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Query 45 QIQEAEKLEKCAAQGRPTAEVFNTIDRFAWDQTPALVKVY 84 ++QE + L+K + QG TAEV+ F+ Q P+ +Y Sbjct 48 RVQEPKHLKKNSGQGESTAEVYKPNQVFS--QIPSTFPIY 85 Lambda K H 0.317 0.132 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1191270180 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40