bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_3260_orf1 Length=75 Score E Sequences producing significant alignments: (Bits) Value At5g58740 43.1 1e-04 At5g53400 41.2 4e-04 At4g27890 37.4 0.007 Hs5729953 33.9 0.084 SPBC19F8.02 32.0 0.32 CE16096 30.4 0.90 Hs21687129 29.3 1.8 Hs14745963 29.3 1.8 YNR070w 28.5 3.0 7294052 27.7 5.2 > At5g58740 Length=158 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query 10 DSKYKFIHKLFVMYAGRLLYEWEQDLSDIHLYLSPPAQTKAKDIQVKIHPNRLRVGLIGK 69 + ++ FIH G+ ++EW+Q L ++++Y++ P K KI + VG+ G Sbjct 8 EKRHDFIHN------GQKVFEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGN 61 Query 70 PPLFD 74 PP + Sbjct 62 PPYLN 66 > At5g53400 Length=304 Score = 41.2 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 0/46 (0%) Query 29 YEWEQDLSDIHLYLSPPAQTKAKDIQVKIHPNRLRVGLIGKPPLFD 74 Y W Q+L ++ + + P TKA+ + +I NRL+VGL G+ P+ D Sbjct 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVD 192 > At4g27890 Length=293 Score = 37.4 bits (85), Expect = 0.007, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 0/46 (0%) Query 29 YEWEQDLSDIHLYLSPPAQTKAKDIQVKIHPNRLRVGLIGKPPLFD 74 Y W Q+L ++ + + P TK++ + +I NRL+VGL G+ + D Sbjct 136 YSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVD 181 > Hs5729953 Length=331 Score = 33.9 bits (76), Expect = 0.084, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query 29 YEWEQDLSDIHLYLS--PPAQTKAKDIQVKIHPNRLRVGLIGKPPLFD 74 Y W Q LS++ L + + K KD+ V I LRVGL G+P + D Sbjct 172 YRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIID 219 > SPBC19F8.02 Length=166 Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust. Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 0/38 (0%) Query 29 YEWEQDLSDIHLYLSPPAQTKAKDIQVKIHPNRLRVGL 66 YEW+Q ++D+ + + P T+AK +QV + + L++ + Sbjct 11 YEWDQTIADVDIVIHVPKGTRAKSLQVDMSNHDLKIQI 48 > CE16096 Length=320 Score = 30.4 bits (67), Expect = 0.90, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query 29 YEWEQDLSDIHLYLSPPA--QTKAKDIQVKIHPNRLRVGLIGKPPLFD 74 Y+W Q L ++ + + A K++D+ VKI + VGL + P+ D Sbjct 161 YQWTQTLQELEVKIPIAAGFAIKSRDVVVKIEKTSVSVGLKNQAPIVD 208 > Hs21687129 Length=157 Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query 15 FIHKLFVMYAGRLLYEWEQDLSDIHLYLSPPAQTKAKDIQVKIHPNRLRVGLIG----KP 70 F + V+ G +W Q L ++ + + P T+A+DIQ + + + + G K Sbjct 5 FEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSVGGREILKG 64 Query 71 PLFD 74 LFD Sbjct 65 KLFD 68 > Hs14745963 Length=583 Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 0/39 (0%) Query 28 LYEWEQDLSDIHLYLSPPAQTKAKDIQVKIHPNRLRVGL 66 LY W+Q D+ + + P + +DIQ++ P+ + + L Sbjct 277 LYYWQQTEDDLTVTIRLPEDSTKEDIQIQFLPDHINIVL 315 > YNR070w Length=1333 Score = 28.5 bits (62), Expect = 3.0, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query 3 MSVQSNVDSKYKFIHKLFVMYAGRLLY----EWEQDLSDIHLYLSPPAQTKAKDIQVKIH 58 ++V ++ Y+ K+ V+YAGR ++ +D + YL PP Q+ A+ + Sbjct 235 VTVYQASENIYETFDKVTVLYAGRQIFCGKTTEAKDYFENMGYLCPPRQSTAEYLTAITD 294 Query 59 PNRL 62 PN L Sbjct 295 PNGL 298 > 7294052 Length=332 Score = 27.7 bits (60), Expect = 5.2, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 18/64 (28%) Query 29 YEWEQDLSDIHL--------YLSPPAQTK----------AKDIQVKIHPNRLRVGLIGKP 70 Y W Q L ++ + Y S AQ K A+D+ + I L+VG+ G+ Sbjct 173 YTWTQTLEEVEVSPGTSLTPYFSYLAQLKIPFNLTFGLRARDLVISIGKKSLKVGIKGQT 232 Query 71 PLFD 74 P+ D Sbjct 233 PIID 236 Lambda K H 0.322 0.140 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1181410888 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40