bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_3172_orf2
Length=129
Score E
Sequences producing significant alignments: (Bits) Value
7298705 38.5 0.003
At5g53480 38.5 0.003
Hs19923142 37.0 0.009
7295663 29.6 1.3
YER110c 29.3 2.0
SPAC1B1.03c 28.1 4.6
Hs12957488 26.9 9.0
> 7298705
Length=884
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query 4 IAKQIAAVTFKNSISAKDMTLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVC 63
+A+ A + KN +++KD + W P+ + IK +LAAL TE T+ A
Sbjct 58 VARMAAGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSCAA- 116
Query 64 QALAKLGVIEL 74
Q +A + VIEL
Sbjct 117 QCVAYVAVIEL 127
> At5g53480
Length=870
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 0/88 (0%)
Query 5 AKQIAAVTFKNSISAKDMTLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVCQ 64
++++A + KN++ AK+ Q W AL TK++I+ LL L V + Q
Sbjct 55 SRKLAGLVLKNALDAKEQHRKYELVQRWLALDMSTKSQIRAFLLKTLSAPVPDVRSTASQ 114
Query 65 ALAKLGVIELRSLEFEDLLPALQDMVQQ 92
+AK+ IEL ++ +L+ +L + Q
Sbjct 115 VIAKVAGIELPQKQWPELIVSLLSNIHQ 142
> Hs19923142
Length=876
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query 4 IAKQIAAVTFKNSISAKDMTLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVC 63
+A+ A + KNS+++KD + Q W A+ A + E+K +L L TE + +A
Sbjct 52 VARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSA-S 110
Query 64 QALAKLGVIELRSLEFEDLLPAL 86
Q +A + E+ ++ +L+P L
Sbjct 111 QCVAGIACAEIPVNQWPELIPQL 133
> 7295663
Length=528
Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query 33 RALPAPTKAEIKKQLLAALQTECTQVGNAVCQAL-AKLGVIELRSLEFEDLLPALQDMVQ 91
R P PT I+ Q+ +A+Q+ C+++ N V L A +I L ++ + PA ++
Sbjct 262 RVFPLPTT--IRSQITSAIQSNCSKIKNLVFAVLIANNKLIALVRMKKYSIHPADLRLIF 319
Query 92 QAVSCQQPQKQQQ 104
V C + K +
Sbjct 320 NLVECSESFKSSE 332
> YER110c
Length=1113
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query 29 AQAWRALPAPTKAEIKKQLL-AALQTECTQVGNAVCQALAKLGVIELRSLEFEDLLPAL 86
++ W A+ T+A IK LL A V ++ + +A +G EL ++ DL+P L
Sbjct 68 SKHWNAIDESTRASIKTSLLQTAFSEPKENVRHSNARVIASIGTEELDGNKWPDLVPNL 126
> SPAC1B1.03c
Length=863
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query 9 AAVTFKNSISAKDMTLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVCQALAK 68
A + KN+I+A++ Q W++LP K ++K L L + Q G + Q +A
Sbjct 57 AGLALKNAITAREEARKLEYQQLWQSLPVEIKQQVKSLALQTLGSSEHQAGQSAAQLVAA 116
Query 69 LGVIELRSLEFEDLLPALQDMVQQAVSCQQPQKQQQQKQQ 108
+ EL + ++ DL+ L V + QP +Q Q
Sbjct 117 IAAYELATNQWPDLMVTLVANVGEG----QPSALKQHSLQ 152
> Hs12957488
Length=3012
Score = 26.9 bits (58), Expect = 9.0, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query 23 TLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVCQALAKLGVIELRSLEFEDL 82
T DG + +A+ P+ + KQL+ ++ E ++ ++ LG SL F +L
Sbjct 947 TPDGTVSYDNKAIGTPSVGVLLKQLVPLMRLESIEITESLV-----LGFGRTNSLVFREL 1001
Query 83 LPALQDMVQQAVSCQQPQKQQ 103
+ L ++++A+ ++P+ ++
Sbjct 1002 VEELHPLMKEALE-RRPENKK 1021
Lambda K H
0.318 0.127 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1209785478
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40