bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2988_orf1
Length=103
Score E
Sequences producing significant alignments: (Bits) Value
Hs20149522 115 2e-26
SPBP19A11.03c 112 2e-25
CE17253 109 1e-24
At2g20580 102 2e-22
YHR027c 99.8 1e-21
At4g28470 70.1 9e-13
ECU04g0310 67.4 6e-12
At4g29640 32.3 0.20
Hs18874099 30.8 0.71
Hs4507677 28.9 2.2
7299719 28.9 2.4
7292966 28.9 2.7
Hs18546550 28.5 3.6
At1g16480 28.1 3.7
SPCC962.03c 28.1 3.9
SPBC21.06c 27.7 5.2
At5g05160 27.7 5.6
At3g09580 27.3 7.0
SPAC4F10.08 27.3 7.0
> Hs20149522
Length=908
Score = 115 bits (287), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/99 (55%), Positives = 77/99 (77%), Gaps = 0/99 (0%)
Query 3 LIDLLSKLSHDADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDPSALFVVRLS 62
++D LSK SHDADP+ + +IFAMG++G+GTN++R+A++LRQLA Y+ KDP+ LF+VRL+
Sbjct 706 ILDTLSKFSHDADPEVSYYSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLA 765
Query 63 QGLLYLGKGLLHIGALHSDRQLICRVALGALAIVSYSAL 101
QGL +LGKG L + HSDRQL+ +VA+ L V S L
Sbjct 766 QGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFL 804
> SPBP19A11.03c
Length=891
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Query 1 PQL--IDLLSKLSHDADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDPSALFV 58
PQ+ D LS+ SHD D D A NAIFAMG++GAGT+++R+A LLRQLASYY K+ +ALF+
Sbjct 683 PQMRIFDTLSRYSHDNDLDVAYNAIFAMGLVGAGTSNARLAQLLRQLASYYHKESNALFM 742
Query 59 VRLSQGLLYLGKGLLHIGALHSDRQLICRVALGALAIV 96
VR++QGLLYLGKG + + H++RQ++ + A L V
Sbjct 743 VRIAQGLLYLGKGTMTLNPYHTERQILGQTAFAGLMTV 780
> CE17253
Length=981
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
Query 1 PQL--IDLLSKLSHDADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDPSALFV 58
PQL ++ LSK SHD+D DTA NAIFAMG++GAGTN++R+ ++LR LASY+ KD +L +
Sbjct 761 PQLNILETLSKFSHDSDADTAHNAIFAMGLVGAGTNNARLVAMLRNLASYHYKDQVSLML 820
Query 59 VRLSQGLLYLGKGLLHIGALHSDRQLICRVALGALAIVSYSAL 101
VR++QGL +LGKG + + HSDRQL+ AL +L + +S L
Sbjct 821 VRIAQGLTHLGKGTMTLNPWHSDRQLLSPSALASLLSICFSFL 863
> At2g20580
Length=893
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 75/101 (74%), Gaps = 0/101 (0%)
Query 3 LIDLLSKLSHDADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDPSALFVVRLS 62
++D LS+LSHD D + A++AI ++G++GAGTN++RIA +LR L+SYY KD S LF VR++
Sbjct 690 VMDTLSRLSHDTDSEVAMSAIISLGLIGAGTNNARIAGMLRNLSSYYYKDMSLLFCVRIA 749
Query 63 QGLLYLGKGLLHIGALHSDRQLICRVALGALAIVSYSALLM 103
QGL+++GKGLL + HS+R L+ AL + + ++ L M
Sbjct 750 QGLVHMGKGLLTLSPFHSERFLLSPTALAGIVTLLHACLDM 790
> YHR027c
Length=993
Score = 99.8 bits (247), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 8/109 (7%)
Query 1 PQL--IDLLSKLSHDADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDPSALFV 58
PQ+ D L++ SHDAD + ++N+IFAMG+ GAGTN++R+A LLRQLASYY ++ ALF+
Sbjct 788 PQMKVFDTLTRFSHDADLEVSMNSIFAMGLCGAGTNNARLAQLLRQLASYYSREQDALFI 847
Query 59 VRLSQGLLYLGKGLLHIGALHSDRQLICRVALG-----ALAIVSYSALL 102
RL+QGLL+LGKG + + +D ++ +V L A+ +VS S +L
Sbjct 848 TRLAQGLLHLGKGTMTMDVF-NDAHVLNKVTLASILTTAVGLVSPSFML 895
> At4g28470
Length=1103
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 45/57 (78%), Gaps = 0/57 (0%)
Query 3 LIDLLSKLSHDADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDPSALFVV 59
++D LS+LSHD D + A+ AI ++G++GAGTN++RIA +LR L+SYY KD S LF V
Sbjct 760 VMDTLSRLSHDTDSEVAMAAIISLGLIGAGTNNARIAGMLRNLSSYYYKDASLLFCV 816
> ECU04g0310
Length=795
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query 1 PQL--IDLLSKLSHDADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDPSALFV 58
PQ+ +D+L K + + + ++ I ++G++GAGT +SRI +L Q SYY KD L V
Sbjct 602 PQVNVLDMLEKSLNIGETNCIISTIVSLGLIGAGTLNSRITKILDQQYSYYYKDSKVLPV 661
Query 59 VRLSQGLLYLGKGLLHIGALHSDR 82
++++QGL+ LGKGLL I L+ D+
Sbjct 662 LKIAQGLVSLGKGLLSISPLYFDK 685
> At4g29640
Length=346
Score = 32.3 bits (72), Expect = 0.20, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query 33 TNHSRIASLLRQLASYYGKDPSALFVV-RLSQGLLYLG-----KGLLHIGALHSDRQLIC 86
T+H ++ L+R+ A K PS + V R S G YLG KGLL ++H+++ LI
Sbjct 20 TDHKKLPKLIRK-ARNLVKAPSKVGAVGRASSGRFYLGVNVEFKGLLPHFSIHAEQFLIA 78
Query 87 RVALGA 92
+AL +
Sbjct 79 NLALNS 84
> Hs18874099
Length=1081
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 0/34 (0%)
Query 2 QLIDLLSKLSHDADPDTALNAIFAMGILGAGTNH 35
+L+ +L + +ADP+ NAIF MG+L H
Sbjct 899 RLLPVLLSTAQEADPEVRSNAIFGMGVLAEHGGH 932
> Hs4507677
Length=803
Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query 2 QLIDLLSKLSHDADPDT---ALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDPSAL-- 56
+ +D++ K++ D DT +G++ +N +R+A LLR +S++ D ++L
Sbjct 467 KTLDMIKKIADDKYNDTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPTDITSLDQ 526
Query 57 FVVRLSQ 63
+V R+ +
Sbjct 527 YVERMKE 533
> 7299719
Length=1140
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 0/27 (0%)
Query 59 VRLSQGLLYLGKGLLHIGALHSDRQLI 85
+ + + + YL G L+IGA H D QL+
Sbjct 307 ISIPECITYLDNGFLYIGARHGDSQLV 333
> 7292966
Length=555
Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query 3 LIDLLSKLSHDADP-DTALNAIFAMGILGAGTNHSRIASLLRQLASY 48
++DLL D P D LN+++ + ILGA + + +L RQ+A +
Sbjct 238 VVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEF 284
> Hs18546550
Length=362
Score = 28.5 bits (62), Expect = 3.6, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 0/26 (0%)
Query 53 PSALFVVRLSQGLLYLGKGLLHIGAL 78
P +F+ RLS G+L L GL ++G L
Sbjct 16 PERIFICRLSSGILILTAGLPNLGPL 41
> At1g16480
Length=905
Score = 28.1 bits (61), Expect = 3.7, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 0/37 (0%)
Query 6 LLSKLSHDADPDTALNAIFAMGILGAGTNHSRIASLL 42
L+ + D DPD AL A M + G +N+ + S+L
Sbjct 402 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 438
> SPCC962.03c
Length=542
Score = 28.1 bits (61), Expect = 3.9, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
Query 2 QLIDLLSKLSHDADPDTALNAIFAMGILGAGTN 34
Q+I +LSKL + D D ++A++A+ L G N
Sbjct 248 QVIPVLSKLIYTLDEDVLVDALWAISYLSDGAN 280
> SPBC21.06c
Length=1062
Score = 27.7 bits (60), Expect = 5.2, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query 42 LRQLASYYGKDPS---ALFVVRLSQGLLYL-GKGLLH 74
LR + +GK P AL+ ++ QGLLYL +G++H
Sbjct 93 LRSICKNFGKIPENLVALYTFQVLQGLLYLHNQGVIH 129
> At5g05160
Length=640
Score = 27.7 bits (60), Expect = 5.6, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query 26 MGILGAGTNHSRIASLLRQLASYYGKDPSALFVVRLSQGLLYLGKGLLH--IGALHSDRQ 83
M I+G HS LL A YY KD L +++G L+ G++H G D +
Sbjct 391 MEIVGKINQHSNFVPLL---AYYYSKDEKLLVYKYMTKGSLF---GIMHGNRGDRGVDWE 444
Query 84 LICRVALGALAIVSY 98
++A G +SY
Sbjct 445 TRMKIATGTSKAISY 459
> At3g09580
Length=477
Score = 27.3 bits (59), Expect = 7.0, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 0/40 (0%)
Query 14 ADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDP 53
A P AL ++ +G+ T+ A +LR+L+ ++G+ P
Sbjct 369 APPGKALVSVSLIGLFEDRTDDDLAAEVLRELSGWFGESP 408
> SPAC4F10.08
Length=436
Score = 27.3 bits (59), Expect = 7.0, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query 13 DADPDTALNAIFAMGILGAGTNHSRIASLLRQLASYYGKDP--SALFVVRLSQGLLYLGK 70
++ P T + IF + +LG G L+ ++ YG + SA + G+L + +
Sbjct 259 NSKPQTRRSKIFVISLLGYGVYLLAFLDLIEYVSKEYGFEATVSAQIFLWCLFGVLMIAR 318
Query 71 GLLHIGALHSDRQLICRVAL 90
GL+++ + ++ R+A+
Sbjct 319 GLIYLALFRNFLNILKRMAI 338
Lambda K H
0.325 0.140 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1177719780
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40