bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2876_orf1 Length=113 Score E Sequences producing significant alignments: (Bits) Value At1g64400 51.2 5e-07 At4g23850 47.4 7e-06 At4g11030 45.8 2e-05 At2g47240 40.8 6e-04 Hs11276083 39.7 0.001 Hs4503651 39.7 0.001 Hs7706449 38.5 0.003 CE29312 38.5 0.003 At5g27600 38.1 0.004 At1g49430 37.4 0.006 Hs17505198 36.6 0.012 7293854 34.3 0.055 CE04220 33.1 0.13 At2g04350 32.7 0.17 At3g05970 32.0 0.29 7304019 30.8 0.57 Hs12669909 29.6 1.4 Hs4758332 29.3 1.7 Hs6912288_1 27.3 6.8 YPL176c 27.3 6.9 > At1g64400 Length=665 Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 8/95 (8%) Query 5 QYSVSVPSGESTADRTPPR-----RHCSSLDRLAENFSTNPVKNAWELFQMGVGKSAEGP 59 +Y V V G+ D P R + D E + + +AW++F++ V KS P Sbjct 5 RYIVEVEKGKQGVDGGSPSVGPVYRSIYAKDGFPE--PPDDLVSAWDIFRLSVEKSPNNP 62 Query 60 CLGTRLVTPDGRRGEYVWKSYREVERLALEAGSGL 94 LG R + DG+ G+YVW++Y+EV + ++ G+ + Sbjct 63 MLGRREIV-DGKAGKYVWQTYKEVHNVVIKLGNSI 96 > At4g23850 Length=666 Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Query 43 NAWELFQMGVGKSAEGPCLGTRLVTPDGRRGEYVWKSYREVERLALEAGSGL 94 + W++F+M V K P LG R + DG+ G+YVW++Y+EV + ++ G+ L Sbjct 46 SCWDVFRMSVEKYPNNPMLGRREIV-DGKPGKYVWQTYQEVYDIVMKLGNSL 96 > At4g11030 Length=666 Score = 45.8 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%) Query 32 LAENFSTNPV---KNAWELFQMGVGKSAEGPCLGTRLVTPDGRRGEYVWKSYREVERLAL 88 A+N NP+ ++ W++F+ V K LG R ++ +G+ G+YVWK+Y+EV + + Sbjct 32 FAQNGFPNPIDGIQSCWDIFRTAVEKYPNNRMLGRREIS-NGKAGKYVWKTYKEVYDIVI 90 Query 89 EAGSGL 94 + G+ L Sbjct 91 KLGNSL 96 > At2g47240 Length=660 Score = 40.8 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query 41 VKNAWELFQMGVGKSAEGPCLGTRLVTPDGRRGEYVWKSYREVERLALEAGSGL 94 + AW++F V K + LG R + D + G Y+WK+Y+EV L+ GS L Sbjct 41 ITTAWDIFSKSVEKFPDNNMLGWRRIV-DEKVGPYMWKTYKEVYEEVLQIGSAL 93 > Hs11276083 Length=698 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%) Query 36 FSTNPVKNAWELFQMGVGKSAEGPCLGTRLVTPDGRRGEYVWKSYREVERLALEAGSGLL 95 + + V +E FQ G+ S GPCLG+R PD Y W SY++V L+ GS L+ Sbjct 84 YFYDDVTTLYEGFQRGIQVSNNGPCLGSR--KPD---QPYEWLSYKQVAELSECIGSALI 138 Query 96 NGDF 99 F Sbjct 139 QKGF 142 > Hs4503651 Length=699 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%) Query 36 FSTNPVKNAWELFQMGVGKSAEGPCLGTRLVTPDGRRGEYVWKSYREVERLALEAGSGLL 95 + + V +E FQ G+ S GPCLG+R PD Y W SY++V L+ GS L+ Sbjct 84 YFYDDVTTLYEGFQRGIQVSNNGPCLGSR--KPD---QPYEWLSYKQVAELSECIGSALI 138 Query 96 NGDF 99 F Sbjct 139 QKGF 142 > Hs7706449 Length=683 Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query 42 KNAWELFQMGVGKSAEGPCLGTRLVTPDGRRGEYVWKSYREVERLALEAGSGLLNGDF 99 K +E+FQ G+ S GPCLG R P+ Y W SY++V A GS LL+ + Sbjct 75 KTMYEVFQRGLAVSDNGPCLGYR--KPN---QPYRWLSYKQVSDRAEYLGSCLLHKGY 127 > CE29312 Length=731 Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 18/64 (28%) Query 57 EGPCLGTRLV-------TPDGR------RGEYVWKSYREVERLALEAGSGLLNGDFIPLL 103 E PCLGTR + P GR GEYVW+SY+EVE +G+ + L Sbjct 108 ESPCLGTRQLIEVHEDKQPGGRVFEKWHLGEYVWQSYKEVETQVARLAAGIKD-----LA 162 Query 104 HFEQ 107 H EQ Sbjct 163 HEEQ 166 > At5g27600 Length=698 Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query 2 KDVQYSVSVPSGESTADRTPPRRHCSSLDRLAENFSTNP-VKNAWELFQMGVGKSAEGPC 60 K+ YSV +P T R S +L F +P + + F V AE Sbjct 44 KEDSYSVVLPEKLDTGKWNVYRSK-RSPTKLVSRFPDHPEIGTLHDNFVHAVETYAENKY 102 Query 61 LGTRLVTPDGRRGEYVWKSYREVERLALEAGSGLL-----NGDFIPLLHFEQP 108 LGTR V DG GEY W +Y E GSGLL GD + L +P Sbjct 103 LGTR-VRSDGTIGEYSWMTYGEAASERQAIGSGLLFHGVNQGDCVGLYFINRP 154 > At1g49430 Length=666 Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query 41 VKNAWELFQMGVGKSAEGPCLGTRLVTPDGRRGEYVWKSYREVERLALEAGSGL 94 + + W+ F V K LG R VT D + G Y W +Y+E A+ GS + Sbjct 44 IDSPWQFFSEAVKKYPNEQMLGQR-VTTDSKVGPYTWITYKEAHDAAIRIGSAI 96 > Hs17505198 Length=697 Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Query 42 KNAWELFQMGVGKSAEGPCLGTRLVTPDGRRGEYVWKSYREVERLALEAGSGLLN 96 + +++F+ G+ S GPCLG R + Y W SY+EV A GSGLL Sbjct 90 RTMYQVFRRGLSISGNGPCLGFR-----KPKQPYQWLSYQEVADRAEFLGSGLLQ 139 > 7293854 Length=704 Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 13/82 (15%) Query 21 PPRRHCSSLDRLAEN-----FSTNPVKNAWELFQMGVGKSAEGPCLGTR--LVTPDGRRG 73 P + H S + ++N + T V+ ++ F+ G S GPCLG R L +P Sbjct 76 PEQIHVSKFYKESKNGKFVSYITENVRTLYQTFREGAYASNNGPCLGWRETLTSP----- 130 Query 74 EYVWKSYREVERLALEAGSGLL 95 Y W +Y E A G+G+L Sbjct 131 -YQWINYDEALLRAKNFGAGML 151 > CE04220 Length=726 Score = 33.1 bits (74), Expect = 0.13, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 14/107 (13%) Query 1 AKDVQYSVSVPSGESTADRTPPRRHCSSLDRLAENFSTNPVKNAWELFQMGVGKSAEGPC 60 A+ ++ S V + D T P ++ S+ D L N S + + ++ V + PC Sbjct 49 AEKLEKSERVKAEPDNGDPTTPWKNVSAKDGLM-NSSFEGIHDLGTQWEECVRRYGNQPC 107 Query 61 LGTRLV-------TPDGR------RGEYVWKSYREVERLALEAGSGL 94 +GTR V +G+ G+Y W+SY +V++ SGL Sbjct 108 MGTREVLKVHKEKQSNGKIFEKWQMGDYHWRSYAQVDKRVNMIASGL 154 > At2g04350 Length=720 Score = 32.7 bits (73), Expect = 0.17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 13/63 (20%) Query 47 LFQMGVGKSAEGPCLGTR-------LVTPDGRR------GEYVWKSYREVERLALEAGSG 93 LF+ K ++ LGTR + DGR+ GEY W+SY EV SG Sbjct 86 LFEQSCKKYSKDRLLGTREFIDKEFITASDGRKFEKLHLGEYKWQSYGEVFERVCNFASG 145 Query 94 LLN 96 L+N Sbjct 146 LVN 148 > At3g05970 Length=657 Score = 32.0 bits (71), Expect = 0.29, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 3/95 (3%) Query 3 DVQYSVSVPSGESTADRTPPRRHCSSLDRLAENFSTNP-VKNAWELFQMGVGKSAEGPCL 61 D YSV +P +T R S +L F +P + + F+ V + L Sbjct 45 DNGYSVVLPEKLNTGSWNVYRSAKSPF-KLVSRFPDHPDIATLHDNFEHAVHDFRDYKYL 103 Query 62 GTRLVTPDGRRGEYVWKSYREVERLALEAGSGLLN 96 GTR V DG G+Y W +Y E GSGL++ Sbjct 104 GTR-VRVDGTVGDYKWMTYGEAGTARTALGSGLVH 137 > 7304019 Length=766 Score = 30.8 bits (68), Expect = 0.57, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 13/48 (27%) Query 60 CLGTRL-------VTPDGR------RGEYVWKSYREVERLALEAGSGL 94 CLGTR V +GR G+Y WK++ E ER A G GL Sbjct 103 CLGTRQILSEEDEVQQNGRVFKKYNLGDYKWKTFTEAERTAANFGRGL 150 > Hs12669909 Length=711 Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 13/62 (20%) Query 46 ELFQMGVGKSAEGPCLGTRLV-------TPDGR------RGEYVWKSYREVERLALEAGS 92 +LF V K + LGTR + P+G+ G Y W +Y EV R GS Sbjct 81 KLFDHAVSKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWMNYLEVNRRVNNFGS 140 Query 93 GL 94 GL Sbjct 141 GL 142 > Hs4758332 Length=670 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 13/62 (20%) Query 46 ELFQMGVGKSAEGPCLGTRLV-------TPDGR------RGEYVWKSYREVERLALEAGS 92 +LF V K + LGTR + P+G+ G Y W +Y EV R GS Sbjct 40 KLFDHAVSKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWMNYLEVNRRVNNFGS 99 Query 93 GL 94 GL Sbjct 100 GL 101 > Hs6912288_1 Length=1923 Score = 27.3 bits (59), Expect = 6.8, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 16/75 (21%) Query 1 AKDVQYSVSVPSGESTADRTPPRRHCSSLDRLAENFSTNPVKNAWEL--FQMGVGKSAEG 58 +KDV +S S+P+ E +R S L E TN V W +Q+G G S E Sbjct 186 SKDVHHSTSLPNLEKEGKPHSDKRSTSHLPTSVEKHCTNGV---WSRSHYQVGEGSSNE- 241 Query 59 PCLGTRLVTPDGRRG 73 D RRG Sbjct 242 ----------DSRRG 246 > YPL176c Length=783 Score = 27.3 bits (59), Expect = 6.9, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 0/38 (0%) Query 76 VWKSYREVERLALEAGSGLLNGDFIPLLHFEQPGGQQL 113 ++ + ++ +A GLLNGDFI L+H+ QQ+ Sbjct 251 IYANKASLDDMASMQDQGLLNGDFILLVHYGDYVFQQM 288 Lambda K H 0.315 0.135 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1185472426 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40