bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2811_orf1
Length=90
Score E
Sequences producing significant alignments: (Bits) Value
7292439 30.0 0.97
Hs4506487 29.3 1.6
SPAC1687.03c 28.9 2.3
7295848 28.1 4.1
Hs11545777 27.7 5.0
At2g14100 27.7 6.0
CE25068 26.9 8.2
SPAC4G9.05 26.9 9.3
> 7292439
Length=331
Score = 30.0 bits (66), Expect = 0.97, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query 1 VARVELGPDERRGIAELNGEGEVASGIVLQRFGMNALDVIENVKKRFKEIATSLPKSVEI 60
+AR+ LG + + ELN E +DV+ N K F + +LP+
Sbjct 69 LARILLGDSYKEAVLELNASNE------------RGIDVVRNKIKMFAQQKVTLPRGRHK 116
Query 61 VPVYDRSN-LIYAAIETLKRTL 81
+ + D ++ + A + L+RT+
Sbjct 117 IVILDEADSMTEGAQQALRRTM 138
> Hs4506487
Length=354
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query 1 VARVELGPDERRGIAELNGEGEVASGIVLQRFGMNALDVIENVKKRFKEIATSLPKSVEI 60
+AR LGP + + ELN + +DV+ N K F + +LPK
Sbjct 89 LARALLGPALKDAMLELNASND------------RGIDVVRNKIKMFAQQKVTLPKGRHK 136
Query 61 VPVYDRSN-LIYAAIETLKRTL 81
+ + D ++ + A + L+RT+
Sbjct 137 IIILDEADSMTDGAQQALRRTM 158
> SPAC1687.03c
Length=342
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query 1 VARVELGPDERRGIAELNGEGEVASGIVLQRFGMNALDVIENVKKRFKEIATSLPKSVEI 60
+A LGP + G+ ELN E +DV+ N K F + LP
Sbjct 74 LAHALLGPAYKEGVLELNASDE------------RGIDVVRNRIKAFAQKKVILPPGRHK 121
Query 61 VPVYDRSNLIYA-AIETLKRTL 81
+ + D ++ + A A + L+RT+
Sbjct 122 IIILDEADSMTAGAQQALRRTM 143
> 7295848
Length=2438
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 15/88 (17%)
Query 14 IAELNGEGEVASGIVLQRFGMNAL--------------DVIENVKKRF-KEIATSLPKSV 58
+A+LN EG A + + ++ +I N K R + I+TS+P+S
Sbjct 700 VAKLNAEGVFAKAVNSSGYAFHSKYIAEAGPKLRKSLEKIIPNAKNRTARWISTSIPESA 759
Query 59 EIVPVYDRSNLIYAAIETLKRTLLEESV 86
PV +S+ Y L L E++
Sbjct 760 WNTPVAKQSSAAYHVNNLLSPVLFHEAL 787
> Hs11545777
Length=742
Score = 27.7 bits (60), Expect = 5.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 0/44 (0%)
Query 43 VKKRFKEIATSLPKSVEIVPVYDRSNLIYAAIETLKRTLLEESV 86
V+K +ATSLP+ + + DR +L A I+ RT E+ +
Sbjct 408 VRKEMALLATSLPEGIMVKTFEDRMDLFSALIKGPTRTPYEDGL 451
> At2g14100
Length=518
Score = 27.7 bits (60), Expect = 6.0, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query 12 RGIAELNGEGEVASGIVLQRFGMNALDVIENVKKRFKEIATSLPKSVEIVPVYDRSNLIY 71
RG E NGE E G+V + F + + V +R EI P E + V + +
Sbjct 202 RGCLEENGEAERVRGLVTETFALFKKLFLTQVLRRLFEILRISPFKKETLDVSRKFD--- 258
Query 72 AAIETLKRTLLE 83
E L+R ++E
Sbjct 259 ---ELLERIIVE 267
> CE25068
Length=1114
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query 29 LQRFGMNAL--DVIENVKKRFKEIATSLPKSVEI 60
L+RF ++ L DVI+ + +R E+A +LP+ V++
Sbjct 173 LERFQIDKLSDDVIDLIGRRVFEVAATLPRDVDV 206
> SPAC4G9.05
Length=581
Score = 26.9 bits (58), Expect = 9.3, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query 43 VKKRFKEIATS------LPKSVEIVPVYDRSNLIYAAIETLKRTLLE 83
+KK KE++ L KS+EI P +NLI IE L TL++
Sbjct 328 LKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPATLMQ 374
Lambda K H
0.316 0.136 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1177758614
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40