bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2565_orf1
Length=94
Score E
Sequences producing significant alignments: (Bits) Value
Hs11545855 39.7 0.001
7290061 38.9 0.002
SPBC16G5.02c 38.1 0.004
CE03147 36.2 0.015
YCR036w 35.0 0.033
7297937 32.7 0.16
At2g31390 32.7 0.18
At1g06020 32.3 0.19
At1g17160 31.6 0.40
At1g06030 30.4 0.75
YER152c 30.4 0.75
Hs6912612 28.9 2.2
At1g66430 28.9 2.6
Hs10947056 27.3 6.1
Hs4502397 27.3 6.3
7300536 26.9 9.8
> Hs11545855
Length=322
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 0/59 (0%)
Query 36 AMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVAQGGENTIAYLPGAN 94
+MV ++G+D G ++ + + I T + AATGTA + V G+N I + GAN
Sbjct 70 SMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGAN 128
> 7290061
Length=304
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 0/59 (0%)
Query 36 AMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVAQGGENTIAYLPGAN 94
A+V ++G D G +L H + ++ + + TG A + V+ GGEN I + GAN
Sbjct 58 ALVAKLGADTFGSDYLRHLREERVNVNHVEQLAEETTGVAQIAVSDGGENNIIIVVGAN 116
> SPBC16G5.02c
Length=318
Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 0/65 (0%)
Query 30 PSTCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVAQGGENTIAY 89
P+ V+M+G +G D G+ L + G++ + + +TG A++ V + GEN I
Sbjct 56 PADTKVSMLGCVGDDAFGVEMLSGLKKDGVNVDNVKKIENKSTGVAMIIVEETGENRILL 115
Query 90 LPGAN 94
GAN
Sbjct 116 SEGAN 120
> CE03147
Length=343
Score = 36.2 bits (82), Expect = 0.015, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query 8 GTSHQGSDIALCENGARTNGGTPST---CGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGI 64
G S +G + L G N + V+M+G +G D+ G S + S G+DT +
Sbjct 58 GESVRGHNFKLGSGGKGANQAVAAARLGINVSMIGMVGEDMFGDSNIKDLSSNGVDTSCV 117
Query 65 FTDSHAATGTALVTVAQGGENTIAYLPGAN 94
T TA +TV + GEN I GAN
Sbjct 118 GRTKKTHTATATITVNKEGENNIVVTLGAN 147
> YCR036w
Length=333
Score = 35.0 bits (79), Expect = 0.033, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query 31 STCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVAQ--GGENTIA 88
S V M+G +G D G G+D + T TGTA + + + GG+N I
Sbjct 55 SRYSVRMIGNVGNDTFGKQLKDTLSDCGVDITHVGTYEGINTGTATILIEEKAGGQNRIL 114
Query 89 YLPGAN 94
+ GAN
Sbjct 115 IVEGAN 120
> 7297937
Length=394
Score = 32.7 bits (73), Expect = 0.16, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query 4 ECSFGTSHQGSDIALCENGARTNGGTPSTCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRG 63
E FG +A + GA T +V ++G+D +G +L+H Q +D
Sbjct 2 ETCFGGKGANQCVAAAKLGAST----------VLVAKLGKDESGDDYLNHLQQHEVDVTH 51
Query 64 IFTDSHAATGTALVTVAQGGENTIAYLPGAN 94
+ + TG + + V++ G+ + GAN
Sbjct 52 VQQVENNPTGMSEIAVSENGDQYKINVAGAN 82
> At2g31390
Length=325
Score = 32.7 bits (73), Expect = 0.18, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query 7 FGTSHQGSDIALCENGARTNGGTPSTCGVAM---------VGRIGRDVAGLSFLHHFQSL 57
F + G +A + GG P+ +A+ VG++G D G +
Sbjct 20 FVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEFGHMLAGILRKN 79
Query 58 GIDTRGIFTDSHAATGTALVTVAQGGENTIAY 89
G+D +GI D+ A T A VT+ G+ +
Sbjct 80 GVDDQGINFDTGARTALAFVTLRADGDREFMF 111
> At1g06020
Length=345
Score = 32.3 bits (72), Expect = 0.19, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query 14 SDIALCENGA--RTNGGTPSTCGVAM---------VGRIGRDVAGLSFLHHFQSLGIDTR 62
S ++L E+ + GG P+ +A+ VG++G D G + G+D +
Sbjct 26 SGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQ 85
Query 63 GIFTDSHAATGTALVTVAQGGENTIAY 89
GI D A T A VT+ GE +
Sbjct 86 GINFDEGARTALAFVTLRSDGEREFMF 112
> At1g17160
Length=379
Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query 27 GGTPSTCGVAM------VGRIGRDVAGLSFLHHFQSLGIDTRGIFTD-----SHAATGTA 75
G + CG + VGR+G D G ++LG D G+ D ++ TG A
Sbjct 108 GANQAACGAKLMYPTYFVGRLGEDAHGKLIA---EALGDDGCGVHLDYVRSVNNEPTGHA 164
Query 76 LVTVAQGGENTIAYLPGAN 94
+V + G+N+I + GAN
Sbjct 165 VVMLQSDGQNSIIIVGGAN 183
> At1g06030
Length=329
Score = 30.4 bits (67), Expect = 0.75, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query 14 SDIALCENGA--RTNGGTPSTCGVAM---------VGRIGRDVAGLSFLHHFQSLGIDTR 62
S ++L E+ + GG P+ +A+ VG++G D G + +D +
Sbjct 27 SGVSLSESSGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDEFGHMLAGILRKNDVDDQ 86
Query 63 GIFTDSHAATGTALVTVAQGGENTIAY 89
GI D A T A VT+ GE +
Sbjct 87 GINFDKGARTALAFVTLRSDGEREFMF 113
> YER152c
Length=443
Score = 30.4 bits (67), Expect = 0.75, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query 18 LCENGARTNGGTPSTCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDS---HAATGT 74
L + GA +GGTPS +VG + R A + H +S+ + + T + + GT
Sbjct 294 LSKGGANVSGGTPSQLNSMIVGEMLRSGAAQRCIAHLRSVYSERATVLTSALKKYMPLGT 353
Query 75 ALVTVAQGGENTIAYLPGA 93
++ + +GG T LP A
Sbjct 354 EIMPL-KGGYFTWITLPPA 371
> Hs6912612
Length=853
Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query 2 THECSFGTSHQGSDIALCENGART--NGGTPS---TCG----VAMVGRI 41
T C G QG + +C NG R NG TPS +CG A +GRI
Sbjct 243 TFHCDSGYQLQGEETLICLNGTRPSWNGETPSCMASCGGTIHNATLGRI 291
> At1g66430
Length=384
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query 24 RTNGGTPSTCGV---------AMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGT 74
+ GG P+ V A +G++G D G + + ++ G+ D A T
Sbjct 93 KAPGGAPANVAVGIARLGGSSAFIGKVGEDEFGYMLANILKDNNVNNDGMRFDPGARTAL 152
Query 75 ALVTVAQGGENTIAY 89
A VT+ GE +
Sbjct 153 AFVTLTNEGEREFMF 167
> Hs10947056
Length=4377
Score = 27.3 bits (59), Expect = 6.1, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query 21 NGARTNGGTPSTCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVA 80
N A T+G TP + + R G + L H SL I T+ FT H A + VA
Sbjct 526 NAATTSGYTP----LHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVA 581
> Hs4502397
Length=764
Score = 27.3 bits (59), Expect = 6.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 0/31 (0%)
Query 1 VTHECSFGTSHQGSDIALCENGARTNGGTPS 31
VT+ CS G + +GS C+ G +G PS
Sbjct 187 VTYHCSRGLTLRGSQRRTCQEGGSWSGTEPS 217
> 7300536
Length=603
Score = 26.9 bits (58), Expect = 9.8, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query 4 ECS--FGTSHQGSDIALCENGARTNGGTPSTCGVAMVGRIGRDVAGLSFLHHFQSLG 58
ECS + H G +C G G G ++G GR ++FL S G
Sbjct 216 ECSEKYAHRHFGPRFQICAGGLDNRGTCDGDSGSPLMGTSGRSYETITFLAGITSYG 272
Lambda K H
0.318 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1164659894
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40