bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2565_orf1 Length=94 Score E Sequences producing significant alignments: (Bits) Value Hs11545855 39.7 0.001 7290061 38.9 0.002 SPBC16G5.02c 38.1 0.004 CE03147 36.2 0.015 YCR036w 35.0 0.033 7297937 32.7 0.16 At2g31390 32.7 0.18 At1g06020 32.3 0.19 At1g17160 31.6 0.40 At1g06030 30.4 0.75 YER152c 30.4 0.75 Hs6912612 28.9 2.2 At1g66430 28.9 2.6 Hs10947056 27.3 6.1 Hs4502397 27.3 6.3 7300536 26.9 9.8 > Hs11545855 Length=322 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 36 AMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVAQGGENTIAYLPGAN 94 +MV ++G+D G ++ + + I T + AATGTA + V G+N I + GAN Sbjct 70 SMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGAN 128 > 7290061 Length=304 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 0/59 (0%) Query 36 AMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVAQGGENTIAYLPGAN 94 A+V ++G D G +L H + ++ + + TG A + V+ GGEN I + GAN Sbjct 58 ALVAKLGADTFGSDYLRHLREERVNVNHVEQLAEETTGVAQIAVSDGGENNIIIVVGAN 116 > SPBC16G5.02c Length=318 Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 0/65 (0%) Query 30 PSTCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVAQGGENTIAY 89 P+ V+M+G +G D G+ L + G++ + + +TG A++ V + GEN I Sbjct 56 PADTKVSMLGCVGDDAFGVEMLSGLKKDGVNVDNVKKIENKSTGVAMIIVEETGENRILL 115 Query 90 LPGAN 94 GAN Sbjct 116 SEGAN 120 > CE03147 Length=343 Score = 36.2 bits (82), Expect = 0.015, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 3/90 (3%) Query 8 GTSHQGSDIALCENGARTNGGTPST---CGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGI 64 G S +G + L G N + V+M+G +G D+ G S + S G+DT + Sbjct 58 GESVRGHNFKLGSGGKGANQAVAAARLGINVSMIGMVGEDMFGDSNIKDLSSNGVDTSCV 117 Query 65 FTDSHAATGTALVTVAQGGENTIAYLPGAN 94 T TA +TV + GEN I GAN Sbjct 118 GRTKKTHTATATITVNKEGENNIVVTLGAN 147 > YCR036w Length=333 Score = 35.0 bits (79), Expect = 0.033, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query 31 STCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVAQ--GGENTIA 88 S V M+G +G D G G+D + T TGTA + + + GG+N I Sbjct 55 SRYSVRMIGNVGNDTFGKQLKDTLSDCGVDITHVGTYEGINTGTATILIEEKAGGQNRIL 114 Query 89 YLPGAN 94 + GAN Sbjct 115 IVEGAN 120 > 7297937 Length=394 Score = 32.7 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 10/91 (10%) Query 4 ECSFGTSHQGSDIALCENGARTNGGTPSTCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRG 63 E FG +A + GA T +V ++G+D +G +L+H Q +D Sbjct 2 ETCFGGKGANQCVAAAKLGAST----------VLVAKLGKDESGDDYLNHLQQHEVDVTH 51 Query 64 IFTDSHAATGTALVTVAQGGENTIAYLPGAN 94 + + TG + + V++ G+ + GAN Sbjct 52 VQQVENNPTGMSEIAVSENGDQYKINVAGAN 82 > At2g31390 Length=325 Score = 32.7 bits (73), Expect = 0.18, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 9/92 (9%) Query 7 FGTSHQGSDIALCENGARTNGGTPSTCGVAM---------VGRIGRDVAGLSFLHHFQSL 57 F + G +A + GG P+ +A+ VG++G D G + Sbjct 20 FVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEFGHMLAGILRKN 79 Query 58 GIDTRGIFTDSHAATGTALVTVAQGGENTIAY 89 G+D +GI D+ A T A VT+ G+ + Sbjct 80 GVDDQGINFDTGARTALAFVTLRADGDREFMF 111 > At1g06020 Length=345 Score = 32.3 bits (72), Expect = 0.19, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 11/87 (12%) Query 14 SDIALCENGA--RTNGGTPSTCGVAM---------VGRIGRDVAGLSFLHHFQSLGIDTR 62 S ++L E+ + GG P+ +A+ VG++G D G + G+D + Sbjct 26 SGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQ 85 Query 63 GIFTDSHAATGTALVTVAQGGENTIAY 89 GI D A T A VT+ GE + Sbjct 86 GINFDEGARTALAFVTLRSDGEREFMF 112 > At1g17160 Length=379 Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 14/79 (17%) Query 27 GGTPSTCGVAM------VGRIGRDVAGLSFLHHFQSLGIDTRGIFTD-----SHAATGTA 75 G + CG + VGR+G D G ++LG D G+ D ++ TG A Sbjct 108 GANQAACGAKLMYPTYFVGRLGEDAHGKLIA---EALGDDGCGVHLDYVRSVNNEPTGHA 164 Query 76 LVTVAQGGENTIAYLPGAN 94 +V + G+N+I + GAN Sbjct 165 VVMLQSDGQNSIIIVGGAN 183 > At1g06030 Length=329 Score = 30.4 bits (67), Expect = 0.75, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 11/87 (12%) Query 14 SDIALCENGA--RTNGGTPSTCGVAM---------VGRIGRDVAGLSFLHHFQSLGIDTR 62 S ++L E+ + GG P+ +A+ VG++G D G + +D + Sbjct 27 SGVSLSESSGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDEFGHMLAGILRKNDVDDQ 86 Query 63 GIFTDSHAATGTALVTVAQGGENTIAY 89 GI D A T A VT+ GE + Sbjct 87 GINFDKGARTALAFVTLRSDGEREFMF 113 > YER152c Length=443 Score = 30.4 bits (67), Expect = 0.75, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query 18 LCENGARTNGGTPSTCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDS---HAATGT 74 L + GA +GGTPS +VG + R A + H +S+ + + T + + GT Sbjct 294 LSKGGANVSGGTPSQLNSMIVGEMLRSGAAQRCIAHLRSVYSERATVLTSALKKYMPLGT 353 Query 75 ALVTVAQGGENTIAYLPGA 93 ++ + +GG T LP A Sbjct 354 EIMPL-KGGYFTWITLPPA 371 > Hs6912612 Length=853 Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 9/49 (18%) Query 2 THECSFGTSHQGSDIALCENGART--NGGTPS---TCG----VAMVGRI 41 T C G QG + +C NG R NG TPS +CG A +GRI Sbjct 243 TFHCDSGYQLQGEETLICLNGTRPSWNGETPSCMASCGGTIHNATLGRI 291 > At1g66430 Length=384 Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 9/75 (12%) Query 24 RTNGGTPSTCGV---------AMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGT 74 + GG P+ V A +G++G D G + + ++ G+ D A T Sbjct 93 KAPGGAPANVAVGIARLGGSSAFIGKVGEDEFGYMLANILKDNNVNNDGMRFDPGARTAL 152 Query 75 ALVTVAQGGENTIAY 89 A VT+ GE + Sbjct 153 AFVTLTNEGEREFMF 167 > Hs10947056 Length=4377 Score = 27.3 bits (59), Expect = 6.1, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query 21 NGARTNGGTPSTCGVAMVGRIGRDVAGLSFLHHFQSLGIDTRGIFTDSHAATGTALVTVA 80 N A T+G TP + + R G + L H SL I T+ FT H A + VA Sbjct 526 NAATTSGYTP----LHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVA 581 > Hs4502397 Length=764 Score = 27.3 bits (59), Expect = 6.3, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 0/31 (0%) Query 1 VTHECSFGTSHQGSDIALCENGARTNGGTPS 31 VT+ CS G + +GS C+ G +G PS Sbjct 187 VTYHCSRGLTLRGSQRRTCQEGGSWSGTEPS 217 > 7300536 Length=603 Score = 26.9 bits (58), Expect = 9.8, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query 4 ECS--FGTSHQGSDIALCENGARTNGGTPSTCGVAMVGRIGRDVAGLSFLHHFQSLG 58 ECS + H G +C G G G ++G GR ++FL S G Sbjct 216 ECSEKYAHRHFGPRFQICAGGLDNRGTCDGDSGSPLMGTSGRSYETITFLAGITSYG 272 Lambda K H 0.318 0.134 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1164659894 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40