bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2419_orf1 Length=112 Score E Sequences producing significant alignments: (Bits) Value At5g38640 69.7 1e-12 Hs14165262 65.5 2e-11 SPAC21E11.06 62.4 2e-10 At1g48970 61.6 4e-10 7291571 53.9 8e-08 YGR083c 49.7 1e-06 At2g44070 37.0 0.009 At3g03010 30.8 0.59 7299701 30.8 0.69 Hs5803199 28.9 2.1 Hs21618357 28.9 2.3 Hs22043215 28.5 3.6 CE16537 27.3 6.4 > At5g38640 Length=642 Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 0/71 (0%) Query 38 FRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLD 97 F+ + +HPAV +VGLQ + I G NAR +AML +F ++DYS PP +S++R + + Sbjct 312 FQLDPMHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEVVKDYSTPPEKSLNRDMTAKIS 371 Query 98 RRINFITNCRP 108 ++F+ CRP Sbjct 372 SYVSFLIECRP 382 > Hs14165262 Length=523 Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 0/77 (0%) Query 32 LRLLMNFRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRH 91 L M+ +IHPA++R+GLQ + + G+NAR +A+L + I+DY+ PP E + R Sbjct 192 LTQFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDYTTPPNEELSRD 251 Query 92 IKLSLDRRINFITNCRP 108 + L ++F+T CRP Sbjct 252 LVNKLKPYMSFLTQCRP 268 > SPAC21E11.06 Length=467 Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 0/66 (0%) Query 43 IHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLDRRINF 102 IHPAVIR+GL++AN KI G+N R + +L +F I+DY P ++ RH+ ++ +I + Sbjct 141 IHPAVIRLGLKLANYKIFGSNQRCIDLLKTFKIVIQDYQTPYGTTLSRHLTTHINSQIAY 200 Query 103 ITNCRP 108 + + RP Sbjct 201 LVSTRP 206 > At1g48970 Length=756 Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 0/71 (0%) Query 38 FRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLD 97 F + IH AV +VGLQ I G NAR +AML +F IEDYS PP + + + ++ Sbjct 420 FTLDSIHHAVYKVGLQHLAGDISGDNARCIAMLQAFQEAIEDYSTPPMKDLTMDLTAKIN 479 Query 98 RRINFITNCRP 108 ++F+ CRP Sbjct 480 GYVSFLIECRP 490 > 7291571 Length=626 Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 6/111 (5%) Query 4 SSSITASSSTIISSSSSSNSSSSRLPLHLRLLMN------FRQEIIHPAVIRVGLQMANR 57 S + A+SS+ + +S+ + R+ L L+ ++HP++ R+G+Q A R Sbjct 262 SPTTAATSSSPVKCPASTPNVDCRVKLFNHLVCAKEDSQFINDPLVHPSIARLGVQYAKR 321 Query 58 KIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLDRRINFITNCRP 108 + G+NAR +A L + + D+ P + R + ++ ++ + CRP Sbjct 322 TVVGSNARCIAFLHALRQVVHDFETPAKKEFGRSLDAAVKHHVDHLHKCRP 372 > YGR083c Length=651 Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query 33 RLLMNFRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHI 92 LL+N +++IHP+++ + +A+ KI G+ R +AML F I+DY P ++ R++ Sbjct 262 ELLLN--KDLIHPSILLLTSHLAHYKIVGSIPRCIAMLEVFQIVIKDYQTPKGTTLSRNL 319 Query 93 KLSLDRRINFITNCRP 108 L +I+ + RP Sbjct 320 TSYLSHQIDLLKKARP 335 > At2g44070 Length=307 Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust. Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 0/40 (0%) Query 69 MLSSFNCFIEDYSPPPYESIDRHIKLSLDRRINFITNCRP 108 ML +F ++DYS PP +++R + + ++F+ CRP Sbjct 1 MLQAFQEVVKDYSTPPENTLNRDMTAQISSYVSFLIECRP 40 > At3g03010 Length=179 Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 0/53 (0%) Query 7 ITASSSTIISSSSSSNSSSSRLPLHLRLLMNFRQEIIHPAVIRVGLQMANRKI 59 +++ S I + SS + + S+ PL + L +FR+ V+R L+M KI Sbjct 31 LSSKSVAIDAGSSGNKKTKSKEPLEIEKLADFRKNFKMVLVVRNDLKMGKGKI 83 > 7299701 Length=638 Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 0/38 (0%) Query 16 SSSSSSNSSSSRLPLHLRLLMNFRQEIIHPAVIRVGLQ 53 S++ + S + RL L + +M R+EI+HP +R+ L+ Sbjct 412 STNPAQQSPNKRLTLREQQVMQLRREIMHPGGVRLNLR 449 > Hs5803199 Length=250 Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 0/33 (0%) Query 1 TISSSSITASSSTIISSSSSSNSSSSRLPLHLR 33 T+SS +TA +S +IS S++S RLP LR Sbjct 130 TLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLR 162 > Hs21618357 Length=282 Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 0/33 (0%) Query 1 TISSSSITASSSTIISSSSSSNSSSSRLPLHLR 33 T+SS +TA +S +IS S++S RLP LR Sbjct 162 TLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLR 194 > Hs22043215 Length=268 Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%) Query 25 SSRLPLHLRLLMNFRQEIIHPAVIRV--GLQMANRKIQGANARTVAMLSSFNCFIEDYSP 82 SSRLP LRLL +E++ +R GL NR++ R +A + F+ SP Sbjct 85 SSRLPPSLRLLPAMTEEVVGDHHLRASKGLSNLNRRV-----RALAPSRAGKAFVATESP 139 Query 83 PP 84 P Sbjct 140 TP 141 > CE16537 Length=315 Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 6/93 (6%) Query 2 ISSSSITASSSTIISSSSSSNSSSSRLPLHLRLL----MNFRQEIIHPAVIRVGLQMANR 57 + S I+ + I SS +N +L RL+ N + ++ AV++ M N Sbjct 183 VLSKYISVNLEGINISSKQANKFLKKLKEKGRLMSFSATNMKSSLVPSAVVKGTRSMENM 242 Query 58 KIQGANARTVAMLSSFNCFIEDYSPPPYESIDR 90 +I +++ V S FNCF + P Y+ + R Sbjct 243 EI--SDSAEVERRSVFNCFRPSFVKPEYKFMMR 273 Lambda K H 0.320 0.129 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1188972946 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40