bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2176_orf2 Length=79 Score E Sequences producing significant alignments: (Bits) Value YLR153c 90.9 5e-19 7296408 87.8 5e-18 CE03076 82.0 2e-16 YAL054c 80.5 6e-16 At5g36880 79.3 1e-15 Hs17484820 78.2 3e-15 Hs8923896 75.9 2e-14 Hs21269872 75.9 2e-14 ECU05g0310 70.9 6e-13 CE20020 30.4 0.91 Hs22044164 28.1 4.4 YDR264c 27.3 6.4 > YLR153c Length=683 Score = 90.9 bits (224), Expect = 5e-19, Method: Composition-based stats. Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 0/77 (0%) Query 3 CSVVATYWQTETGGHVLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGEEKTGNNVCGVL 62 C + T WQTE+G H++AP GA TKPG A VPFFG I+DP +G E GN+V GVL Sbjct 421 CVICDTMWQTESGSHLIAPLAGAVPTKPGSATVPFFGINACIIDPVTGVELEGNDVEGVL 480 Query 63 CIKRSWPGMCRTVHRAH 79 +K WP M R+V H Sbjct 481 AVKSPWPSMARSVWNHH 497 > 7296408 Length=670 Score = 87.8 bits (216), Expect = 5e-18, Method: Composition-based stats. Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Query 2 QCSVVATYWQTETGGHVLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGEEKTGNNVCGV 61 QCS+V T+WQTETGGHV+ P PGAT KPG A PFFG +P ++D + G E G G Sbjct 427 QCSIVDTFWQTETGGHVITPLPGATPMKPGSASFPFFGVKPTLLD-ECGIEIKGEGE-GY 484 Query 62 LCIKRSWPGMCRTVHRAH 79 L + WPGM RT++ H Sbjct 485 LVFSQPWPGMMRTLYNNH 502 > CE03076 Length=680 Score = 82.0 bits (201), Expect = 2e-16, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 4/77 (5%) Query 1 SQCSVVATYWQTETGGHVLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGE-EKTGNNVC 59 S S+V TYWQTETGGH++ PGAT KPG A +PFFGA P ++D + E G Sbjct 436 SNVSIVDTYWQTETGGHMITCLPGATPMKPGAAAMPFFGASPVLLDAEGRVIEGPGE--- 492 Query 60 GVLCIKRSWPGMCRTVH 76 G LC R+WPGM R ++ Sbjct 493 GSLCFDRAWPGMMRGIY 509 > YAL054c Length=713 Score = 80.5 bits (197), Expect = 6e-16, Method: Composition-based stats. Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Query 1 SQCSVVATYWQTETGGHVLAPFPGA-TVTKPGCAMVPFFGAEPAIVDPQSGEEKTGNNVC 59 ++ +V TYWQTE+G H++ P G T KPG A PFFG + ++DP +GEE ++ Sbjct 461 NEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHAE 520 Query 60 GVLCIKRSWPGMCRTVHRAH 79 GVL +K +WP RT+ + H Sbjct 521 GVLAVKAAWPSFARTIWKNH 540 > At5g36880 Length=693 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 2/79 (2%) Query 1 SQCSVVATYWQTETGGHVLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGEEKTGNNVCG 60 S+C + T+WQTETGG ++ P PGA KPG A PFFG +P IVD + G E G G Sbjct 451 SRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGNEIEG-ECSG 508 Query 61 VLCIKRSWPGMCRTVHRAH 79 LC+K SWPG RT+ H Sbjct 509 YLCVKGSWPGAFRTLFGDH 527 > Hs17484820 Length=430 Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 5/82 (6%) Query 1 SQCSVVATYWQTETGGHVLAPFP---GATVTKPGCAMVPFFGAEPAIVDPQSGEEKTGNN 57 S+C++V T+WQTETGG +AP P GA + P AM PFFG P ++D + G G+N Sbjct 176 SRCTLVDTWWQTETGGICIAPRPSEEGAEIL-PAMAMRPFFGIVPVLMD-EKGSVVEGSN 233 Query 58 VCGVLCIKRSWPGMCRTVHRAH 79 V G LCI ++WPGM RT++ H Sbjct 234 VSGALCISQAWPGMARTIYGDH 255 > Hs8923896 Length=701 Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Query 1 SQCSVVATYWQTETGGHVLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGEEKTGNNVCG 60 +C +V T+WQTETGGH+L P PGAT KPG A PFFG PAI++ E + Sbjct 457 QRCPIVDTFWQTETGGHMLTPLPGATPMKPGSATFPFFGVAPAILNESGEELEGEAEG-- 514 Query 61 VLCIKRSWPGMCRTVHRAH 79 L K+ WPG+ RTV+ H Sbjct 515 YLVFKQPWPGIMRTVYGNH 533 > Hs21269872 Length=606 Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Query 1 SQCSVVATYWQTETGGHVLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGEEKTGNNVCG 60 +C +V T+WQTETGGH+L P PGAT KPG A PFFG PAI++ E + Sbjct 362 QRCPIVDTFWQTETGGHMLTPLPGATPMKPGSATFPFFGVAPAILNESGEELEGEAEG-- 419 Query 61 VLCIKRSWPGMCRTVHRAH 79 L K+ WPG+ RTV+ H Sbjct 420 YLVFKQPWPGIMRTVYGNH 438 > ECU05g0310 Length=632 Score = 70.9 bits (172), Expect = 6e-13, Method: Composition-based stats. Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 3/76 (3%) Query 3 CSVVATYWQTETGGHVLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGEE---KTGNNVC 59 C V+ TYWQTE+GG ++AP P A KP CA +PF G E I DP S + + Sbjct 387 CPVIDTYWQTESGGILIAPIPHAVDIKPECACLPFLGQEVVIADPSSRSDCVVEAKAYEL 446 Query 60 GVLCIKRSWPGMCRTV 75 G + +K SWPG+ R + Sbjct 447 GRVLLKGSWPGITRGI 462 > CE20020 Length=67 Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 9/69 (13%) Query 1 SQCSVVATY-WQTETGGHVLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGEEKTGNNVC 59 S VA Y W+T+ G + C ++ G P + D QS T Sbjct 5 STAKTVAPYTWKTDAGARA--------TSTSDCIVLVLNGNNPIVADVQSCNADTTLPAL 56 Query 60 GVLCIKRSW 68 GV+C KR+W Sbjct 57 GVMCGKRAW 65 > Hs22044164 Length=476 Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query 18 VLAPFPGATVTKPGCAMVPFFGAEPAIVDPQSGEEKTGN-NVCGVLCIKRSWPGMCRTVH 76 V++ PG + PG A P A PA P+SG + + + C V C + VH Sbjct 146 VISDSPGVRIWVPGAAPAPNSRAHPAGAAPESGSPRCPDASPCPVSCRPQDPRSTLAKVH 205 Query 77 R 77 R Sbjct 206 R 206 > YDR264c Length=764 Score = 27.3 bits (59), Expect = 6.4, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Query 13 ETGGHVLAPFPGATVTKPG-----CAMVPFFGAEPAIVDPQSG-EEKTGNNV 58 E+ VLAP PG+T+ KP C V A++ G ++ TG+NV Sbjct 643 ESNDTVLAPVPGSTIRKPRTCFGVCYAVTGMDQWLAVIKETIGIKDSTGHNV 694 Lambda K H 0.320 0.135 0.462 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1168763848 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40