bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2100_orf2 Length=76 Score E Sequences producing significant alignments: (Bits) Value Hs8923844 51.6 3e-07 7302016 35.0 0.030 7297987 34.3 0.065 Hs4504213 33.9 0.077 Hs20535603 33.9 0.077 7297984 33.9 0.082 CE24798 32.7 0.18 Hs4557255_2 32.3 0.23 CE27797 32.0 0.28 CE27430 32.0 0.29 CE24069 31.6 0.33 7293083 30.8 0.61 CE26010_2 29.6 1.4 Hs20541574 29.3 1.7 CE27920 29.3 1.8 7293001 29.3 1.9 ECU02g0590 28.1 3.7 CE00955 27.7 4.7 > Hs8923844 Length=1610 Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHRSAQ-HAMEF 69 IG+ SG V+CG VG+ +R EYT +G VNLAAR+M P + D+ T+ + A F Sbjct 384 IGVASGIVFCGIVGHTVRHEYTVIGQKVNLAARMMMYY-PGIVTCDSVTYNGSNLPAYFF 442 Query 70 KQLP 73 K+LP Sbjct 443 KELP 446 > 7302016 Length=787 Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHR 61 IGI SG V G +GN + + Y G+ VNL +R P I V T+R Sbjct 631 IGIHSGEVVTGVIGNRVPR-YCLFGNTVNLTSRTETTGVPGRINVSEETYR 680 > 7297987 Length=904 Score = 34.3 bits (77), Expect = 0.065, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query 10 GIGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHRSAQH 65 IGI+SG V G VG + Y G+ VN+A+R+ + P I+V T Q Sbjct 774 AIGISSGEVMAGIVGAS-QPHYDIWGNPVNMASRMESTGLPGHIHVTEETSEILQQ 828 > Hs4504213 Length=717 Score = 33.9 bits (76), Expect = 0.077, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHR 61 IG+ SG V+ G VG + + Y G+ V LA + + + PR+I V T+R Sbjct 572 IGLHSGSVFAGVVGVKMPR-YCLFGNNVTLANKFESCSVPRKINVSPTTYR 621 > Hs20535603 Length=690 Score = 33.9 bits (76), Expect = 0.077, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHR 61 IG+ SG V+ G VG + + Y G+ V LA + + + PR+I V T+R Sbjct 575 IGLHSGSVFAGVVGVKMPR-YCLFGNNVTLANKFESCSVPRKINVSPTTYR 624 > 7297984 Length=878 Score = 33.9 bits (76), Expect = 0.082, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHRSAQHAMEF 69 IGI+SG + G VG + Y G+ VN+A+R+ + P I V T SA+ EF Sbjct 756 IGISSGEIMAGVVGAS-QPHYDIWGNPVNMASRMESTGLPGHIQV---TEESAKILQEF 810 > CE24798 Length=1080 Score = 32.7 bits (73), Expect = 0.18, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHRSAQ 64 IG++ G + G +G + +Y G+ VNLA+R+ PR+I+ + R Q Sbjct 975 IGMSVGPLVAGVIGAQ-KPQYDIWGNTVNLASRMDTHGEPRKIHATTDMGRVLQ 1027 > Hs4557255_2 Length=576 Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query 7 LDAGIGITSGRVWCGTVGNDLRK-EYTALGDFVNLAARLMAKAGPREIYVDANTHRSAQH 65 ++ +GI SG V CG +G LRK +Y V+LA R+ A P +++ T + Sbjct 207 INMRVGIHSGNVLCGVIG--LRKWQYDVWSHDVSLANRMEAAGVPGRVHITEATLKHLDK 264 Query 66 AMEFK 70 A E + Sbjct 265 AYEVE 269 > CE27797 Length=613 Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Query 3 KMFGLDAGIGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHRS 62 K + L IG +G + G +G Y GD VN A+R+ + P +I T R Sbjct 505 KNYKLRVRIGFHAGPIAAGVIGIK-NPRYCLFGDTVNFASRMQSNCPPLQIQTSEITARM 563 Query 63 AQHAMEFK 70 E+K Sbjct 564 LLATHEYK 571 > CE27430 Length=1014 Score = 32.0 bits (71), Expect = 0.29, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query 3 KMFGLDAGIGITSGRVWCGTVGNDLRK-EYTALGDFVNLAARLMAKAGPREIYVDANTHR 61 K + L IG +G + G +G +R Y GD VN A+R+ + P +I T R Sbjct 916 KNYKLRIRIGFHAGPIAAGVIG--IRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITAR 973 Query 62 SAQHAMEFK 70 + E+K Sbjct 974 LLFDSHEYK 982 > CE24069 Length=1091 Score = 31.6 bits (70), Expect = 0.33, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query 7 LDAGIGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVD---ANT 59 L +GITSG V G +G+ + + GD VN+A R+ + P I + ANT Sbjct 958 LQIKMGITSGAVAAGILGSTAPR-FCIFGDTVNMACRMASTGNPGSIQLSELTANT 1012 > 7293083 Length=1690 Score = 30.8 bits (68), Expect = 0.61, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query 6 GLDAGIGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANT 59 G+ +G+ +G V CG VG R ++ + V+LA ++ + P ++++ T Sbjct 444 GVKMRVGVHTGTVLCGIVGTR-RVKFDVWSNDVSLANKMESSGKPEQVHISQET 496 Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query 5 FGLDAGIGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYV 55 F L IG+ G V G +G + Y GD VN+A+R+ + P I V Sbjct 1481 FNLILRIGMNIGDVTAGVIGTS-KLYYDIWGDAVNVASRMDSTGLPNRIQV 1530 > CE26010_2 Length=1101 Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREI 53 +GI +G V G VG + Y GD VN+A+R+ + + P +I Sbjct 1003 LGIHTGTVAAGVVGLTAPR-YCLFGDTVNVASRMESTSEPEKI 1044 > Hs20541574 Length=746 Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query 7 LDAGIGITSGRVWCGTVGNDLRK-EYTALGDFVNLAARLMAKAGPREIYVDANT 59 L+ +G+ +GRV CG +G LRK +Y + V LA + A P ++++ T Sbjct 20 LNMRVGLHTGRVLCGVLG--LRKWQYDVWSNDVTLANVMEAAGLPGKVHITKTT 71 Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHR 61 +GI G V G +G R +Y G+ VN+A+R+ + I V HR Sbjct 604 VGINVGPVVAGVIGAR-RPQYDIWGNTVNVASRMDSTGVQGRIQVTEEVHR 653 > CE27920 Length=1280 Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query 11 IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHR 61 IG+ +G G VG + + YT GD VN A+R+ + I+ ++T + Sbjct 1125 IGMHTGPCVAGVVGKTMPR-YTLFGDTVNTASRMESNGEALRIHCSSSTQK 1174 > 7293001 Length=2248 Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query 7 LDAGIGITSGRVWCGTVGNDLRK-EYTALGDFVNLAARLMAKAGPREIYVDANT 59 L+ +GI +GRV CG +G LRK ++ + V LA + + P ++V T Sbjct 365 LNMRVGIHTGRVLCGVLG--LRKWQFDVWSNDVTLANHMESGGEPGRVHVTRAT 416 > ECU02g0590 Length=785 Score = 28.1 bits (61), Expect = 3.7, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Query 2 MKMFGLDAGIGITSGRVWCGTVGNDLRKEYTALGDFVNLAARL 44 +K G+D G+GIT G + VG+ +R G +N A+R+ Sbjct 699 LKHVGIDVGVGITCGSFYTRIVGSHVR----FYGPALNKASRI 737 > CE00955 Length=1253 Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 7/79 (8%) Query 1 GMKMFGLDAG------IGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIY 54 ++ F +D G +GI +G+V CG VG R ++ + V LA + + ++ Sbjct 397 AIRQFDIDRGQEVNMRVGIHTGKVMCGMVGTK-RFKFDVFSNDVTLANEMESSGVAGRVH 455 Query 55 VDANTHRSAQHAMEFKQLP 73 V T + + E ++ P Sbjct 456 VSEATAKLLKGLYEIEEGP 474 Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query 5 FGLDAGIGITSGRVWCGTVGNDLRKEYTALGDFVNLAARLMAKAGPREIYVDANTHRSAQ 64 F +G+ G V G +G + Y GD VN+A+R+ + I V +T Sbjct 1150 FDFVCKLGLNIGPVTAGVIGTT-KLYYDIWGDTVNIASRMYSTGVLNRIQVSQHTREYLL 1208 Query 65 HAMEFK 70 EF+ Sbjct 1209 DRYEFE 1214 Lambda K H 0.321 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1178249128 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40