bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2094_orf1 Length=51 Score E Sequences producing significant alignments: (Bits) Value Hs4759034 94.4 5e-20 7296284 90.1 8e-19 YBR143c 89.7 1e-18 SPAC1834.01 87.0 7e-18 CE27442 82.0 2e-16 CE13279 81.3 4e-16 At3g26618 76.3 1e-14 At1g12920 75.9 2e-14 At5g47880 75.1 3e-14 ECU05g0360 61.2 4e-10 SPAPJ698.03c 28.1 3.7 > Hs4759034 Length=437 Score = 94.4 bits (233), Expect = 5e-20, Method: Composition-based stats. Identities = 45/51 (88%), Positives = 49/51 (96%), Gaps = 0/51 (0%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFITQDKVNVSRLVLAGSADF 51 RGGQSALRFARLRMEKRHNY+RKVAETAVQ+FI+ DKVNV+ LVLAGSADF Sbjct 182 RGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADF 232 > 7296284 Length=464 Score = 90.1 bits (222), Expect = 8e-19, Method: Composition-based stats. Identities = 41/51 (80%), Positives = 46/51 (90%), Gaps = 0/51 (0%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFITQDKVNVSRLVLAGSADF 51 RGGQSALRFARLRMEKRHNY+RKVAE A Q+FIT DK N++ L+LAGSADF Sbjct 182 RGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADF 232 > YBR143c Length=437 Score = 89.7 bits (221), Expect = 1e-18, Method: Composition-based stats. Identities = 43/51 (84%), Positives = 45/51 (88%), Gaps = 0/51 (0%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFITQDKVNVSRLVLAGSADF 51 RGGQSALRFARLR EKRHNY+RKVAE AVQ FIT DKVNV L+LAGSADF Sbjct 179 RGGQSALRFARLREEKRHNYVRKVAEVAVQNFITNDKVNVKGLILAGSADF 229 > SPAC1834.01 Length=433 Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 0/51 (0%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFITQDKVNVSRLVLAGSADF 51 RGGQSALRFARLR EKRHNY+RKVAE AVQ FIT DK NV+ +VLAGSADF Sbjct 179 RGGQSALRFARLRDEKRHNYVRKVAEGAVQHFITDDKPNVAGIVLAGSADF 229 > CE27442 Length=559 Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/51 (74%), Positives = 44/51 (86%), Gaps = 0/51 (0%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFITQDKVNVSRLVLAGSADF 51 RGGQSA+RFARLR EKRHNY+RKVAE +V+ FI DKV V+ L+LAGSADF Sbjct 190 RGGQSAVRFARLRNEKRHNYVRKVAENSVEQFIKNDKVTVAGLILAGSADF 240 > CE13279 Length=443 Score = 81.3 bits (199), Expect = 4e-16, Method: Composition-based stats. Identities = 38/51 (74%), Positives = 44/51 (86%), Gaps = 0/51 (0%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFITQDKVNVSRLVLAGSADF 51 RGGQSA+RFARLR EKRHNY+RKVAE +V+ FI DKV V+ L+LAGSADF Sbjct 190 RGGQSAVRFARLRNEKRHNYVRKVAENSVEQFIKNDKVTVAGLILAGSADF 240 > At3g26618 Length=435 Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats. Identities = 38/53 (71%), Positives = 42/53 (79%), Gaps = 2/53 (3%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFI--TQDKVNVSRLVLAGSADF 51 RGGQSALRFARLRMEKRHNY+RK AE A Q +I + NVS L+LAGSADF Sbjct 180 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADF 232 > At1g12920 Length=434 Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats. Identities = 38/53 (71%), Positives = 42/53 (79%), Gaps = 2/53 (3%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFI--TQDKVNVSRLVLAGSADF 51 RGGQSALRFARLRMEKRHNY+RK AE A Q +I + NVS L+LAGSADF Sbjct 179 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADF 231 > At5g47880 Length=436 Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats. Identities = 38/53 (71%), Positives = 42/53 (79%), Gaps = 2/53 (3%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFI--TQDKVNVSRLVLAGSADF 51 RGGQSALRFARLRMEKRHNY+RK AE A Q +I + NVS L+LAGSADF Sbjct 181 RGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADF 233 > ECU05g0360 Length=386 Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats. Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 0/51 (0%) Query 1 RGGQSALRFARLRMEKRHNYIRKVAETAVQMFITQDKVNVSRLVLAGSADF 51 RGGQS++RFARLR+EKR+ Y++KV E A +F+T +NV L+LAG +D Sbjct 175 RGGQSSVRFARLRVEKRNAYVKKVGEIAGNLFLTNCVMNVEGLILAGQSDL 225 > SPAPJ698.03c Length=1206 Score = 28.1 bits (61), Expect = 3.7, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 0/41 (0%) Query 8 RFARLRMEKRHNYIRKVAETAVQMFITQDKVNVSRLVLAGS 48 RF R+ +RK +AV +FIT V SR+V+A S Sbjct 955 RFLRIYDLGNKKMLRKGELSAVPLFITHITVQASRIVVADS 995 Lambda K H 0.326 0.135 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1161614636 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40