bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_2068_orf3
Length=60
Score E
Sequences producing significant alignments: (Bits) Value
At3g06700 66.2 1e-11
At3g06680 66.2 2e-11
7291277 62.8 1e-10
Hs4506629 60.5 8e-10
Hs20550589 57.0 9e-09
CE15559 53.5 1e-07
SPBC776.01 53.5 1e-07
YFR032c-a 52.0 2e-07
Hs20555958 50.8 6e-07
Hs22056236_1 35.8 0.019
Hs22060941 35.4 0.029
CE25306 35.0 0.038
Hs17446057 30.8 0.60
At3g42910 29.6 1.4
CE25981 29.6 1.5
7293140 27.3 7.3
7293383 26.9 9.3
> At3g06700
Length=61
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 0/47 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRYCK 60
MAKSKNHT HNQ+ K H+NGIKK + R T T+GM PKFLRNQRY +
Sbjct 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 47
> At3g06680
Length=61
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 0/47 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRYCK 60
MAKSKNHT HNQ+ K H+NGIKK + R T T+GM PKFLRNQRY +
Sbjct 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 47
> 7291277
Length=76
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 36/47 (76%), Gaps = 0/47 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRYCK 60
MAKSKNHT HNQNKK HRNGIK+ ++R ST GM KFL NQRY +
Sbjct 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYAR 47
> Hs4506629
Length=159
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 0/46 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRYC 59
MAKSKNHT HNQ++K HRNGIKK +R S KG+ PKFLRN R+
Sbjct 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFA 46
> Hs20550589
Length=209
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 0/47 (0%)
Query 12 AKMAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRY 58
A MAKSKNH H+Q +K HRNGIKK +R S KG+ PKFLRN +
Sbjct 19 ADMAKSKNHNTHDQFQKRHRNGIKKPQSQRSVSLKGVDPKFLRNMPF 65
> CE15559
Length=62
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 0/47 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRYCK 60
MAKSKNHT HNQNKK HRNGI K K S KG+ KF++N R+ +
Sbjct 1 MAKSKNHTNHNQNKKAHRNGITKPKKHIFLSMKGVDAKFIKNLRFSR 47
> SPBC776.01
Length=61
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 32/46 (69%), Gaps = 0/46 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRYC 59
MAKSKNHT HNQNKK HRNGIK+ K R S K KF RNQ++
Sbjct 1 MAKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFA 46
> YFR032c-a
Length=59
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 0/46 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRYC 59
MAKSKNHT HNQ +K HRNGIKK + S KG+ PKF RN ++
Sbjct 1 MAKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRRNHKHA 46
> Hs20555958
Length=220
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 0/42 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRN 55
MAKSKNHT HNQ++K HRN IKK +R S KG+ PKFL N
Sbjct 1 MAKSKNHTTHNQSRKWHRNVIKKPLSQRYKSLKGVDPKFLGN 42
> Hs22056236_1
Length=29
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKAPKRR 41
MAKSKNH H+Q +K HRNGIKK +R
Sbjct 1 MAKSKNHNTHDQFQKRHRNGIKKPQSQR 28
> Hs22060941
Length=162
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query 7 CSLRTAKMAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRN 55
C LR + KNH HNQ+ K HRNGI+K +R G+ KFLR+
Sbjct 32 CGLRC-RHGNVKNHNTHNQSPKWHRNGIRKPRSQRYKCLNGVDLKFLRS 79
> CE25306
Length=87
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 0/45 (0%)
Query 16 KSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCPKFLRNQRYCK 60
K +NHT HN+N K HRNGI K K S +G +F+++ R+ +
Sbjct 14 KPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFR 58
> Hs17446057
Length=258
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 31 RNGIKKAPKRRKTSTKGMCPKFLRNQRYC 59
+NGIKK +R S KG+ PKFLRN +
Sbjct 3 QNGIKKPRLQRYESLKGVDPKFLRNMGFA 31
> At3g42910
Length=649
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 0/27 (0%)
Query 27 KKNHRNGIKKAPKRRKTSTKGMCPKFL 53
KK+ RN I K + RK S KG PK L
Sbjct 130 KKHKRNAISKGGRGRKASKKGRLPKNL 156
> CE25981
Length=223
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 16 KSKNHTYHNQNKKNHRNGIKKA 37
KSKN T HNQN K HR GI K
Sbjct 136 KSKNRTNHNQNNKAHRIGITKP 157
> 7293140
Length=665
Score = 27.3 bits (59), Expect = 7.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 0/40 (0%)
Query 11 TAKMAKSKNHTYHNQNKKNHRNGIKKAPKRRKTSTKGMCP 50
+AK + + +KK GI KAP+ T KG CP
Sbjct 112 SAKFGDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCP 151
> 7293383
Length=1436
Score = 26.9 bits (58), Expect = 9.3, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query 14 MAKSKNHTYHNQNKKNHRNGIKKA--PKRRKTSTK 46
+A+ NH HNQ ++NH+ +K A P + + S K
Sbjct 964 VAEPANHHNHNQGQQNHQGHLKPAAVPGKEQLSAK 998
Lambda K H
0.321 0.128 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181901402
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40