bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_1545_orf1 Length=126 Score E Sequences producing significant alignments: (Bits) Value Hs5031651 40.4 7e-04 SPCC285.11 33.9 0.069 At4g23040 32.7 0.17 Hs4501849 32.0 0.29 At1g59550 30.4 0.84 At3g26410 30.0 1.00 CE16188 29.6 1.4 At4g14250_3 29.3 2.0 7296454 28.9 2.2 At4g10790 28.5 2.8 At1g66670 28.5 3.5 CE02183 28.1 3.8 At4g14250_1 28.1 3.9 Hs20545197 27.7 5.0 ECU10g0410 27.7 5.2 YDL091c 27.3 6.3 Hs14724607 27.3 7.0 CE10292 27.3 7.7 CE10294 27.3 8.0 > Hs5031651 Length=270 Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 9/83 (10%) Query 19 KEVEAPGEEPTGEGEEIKLINLRFPTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPL 78 KE+ EEP+ EE+ + LR P+G + ++F K ++ +F W+ ++ Sbjct 175 KEIPDLPEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYH------- 227 Query 79 TALSSFSLAQTLPRRRFCWTNGR 101 +S +SL+ + PRR G+ Sbjct 228 --ISLYSLSTSFPRRPLAVEGGQ 248 > SPCC285.11 Length=427 Score = 33.9 bits (76), Expect = 0.069, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query 27 EPTGEGEEIKLINLRFPTGKRITKKFTKDVNTTQIFKWVIY 67 EP+ E E +L ++RFP G R ++F KD ++ +V Y Sbjct 320 EPSSEDEPARL-SIRFPDGSRAVRRFKKDDTVESVYNYVDY 359 > At4g23040 Length=577 Score = 32.7 bits (73), Expect = 0.17, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Query 19 KEVEAPGEEPTGEGEEIKLINLRFPTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPL 78 KE P E P GE I L +R P G R ++F K +F ++ I + Sbjct 484 KEASLPQEPPAGEENAITL-QVRLPDGTRHGRRFFKSDKLQSLFDFI--------DICRV 534 Query 79 TALSSFSLAQTLPRRRF 95 +++ L + PRR F Sbjct 535 VKPNTYRLVRPYPRRAF 551 > Hs4501849 Length=1704 Score = 32.0 bits (71), Expect = 0.29, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%) Query 37 LINLR---FPTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPLTALSSFSLAQTLPRR 93 +IN+R FP+ K D ++ + V++E N PL + L + RR Sbjct 102 VINMRVRGFPSEKDFEDYIRYDNCSSSVLAAVVFEHPFNHSKEPLPLAVKYHLRFSYTRR 161 Query 94 RFCWTN-GRIFLFVPPNTEGEDITEI 118 + WT G FL TEG T + Sbjct 162 NYMWTQTGSFFL---KETEGWHTTSL 184 > At1g59550 Length=307 Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 9/68 (13%) Query 26 EEPTGEGEE--IKLINLRFPTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPLTALSS 83 +EP G+ + + I++RFP G+R +KF K Q+ W SH +E + + Sbjct 218 KEPKGDCDRSVVCSISVRFPNGRRKQRKFLKS-EPVQLL-WSFCYSHMDESDNK-----A 270 Query 84 FSLAQTLP 91 F L Q +P Sbjct 271 FKLVQAIP 278 > At3g26410 Length=477 Score = 30.0 bits (66), Expect = 1.00, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 36 KLINLRFPTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPLTALSSFSLAQTLPRR 93 +L++ R P + + + F +++ + +W + E+H+N+ LSS +A+ + +R Sbjct 10 RLLDFRKPEVEALAELFGEEIAENESLQWRLPENHHNDTPFHFVQLSSEEIARNIAKR 67 > CE16188 Length=444 Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 14/81 (17%) Query 13 SMECYRKEVEAPGEEPTGEGEEIKLINLRFPTGKRITKKFTKDVNTTQIFKWVIYESHNN 72 ++E Y++ + TG + + +RFPTGK++ KF D N +IF E+ + Sbjct 331 TVETYKRTISGDTTLSTGSHDLL----IRFPTGKKVI-KFNADDNIEKIFD----EAMKS 381 Query 73 EGISPLTALSSFSLAQTLPRR 93 E + PL F + Q+ P++ Sbjct 382 E-MCPLF----FQMHQSFPKK 397 > At4g14250_3 Length=287 Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 9/68 (13%) Query 26 EEPTGEGEEIKLINL--RFPTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPLTALSS 83 EEP G+ + + +L RFP G+R +KF K Q+ W SH +E + + Sbjct 198 EEPKGDCDRSVVCSLCVRFPDGRRKQRKFLKS-EPIQLL-WSFCYSHIDE-----SEKKA 250 Query 84 FSLAQTLP 91 F L Q +P Sbjct 251 FKLVQAIP 258 > 7296454 Length=396 Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 0/32 (0%) Query 1 NEDPELQEAIRLSMECYRKEVEAPGEEPTGEG 32 NEDPEL A+R+SME R+ E+ +G Sbjct 212 NEDPELALALRVSMEEQRQRQESEQRRANPDG 243 > At4g10790 Length=480 Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query 23 APGEEPTGEGEEIKLINLRFPTGKRITKKFTKDVNTTQIFKWV 65 A GEEP +G ++ + +RFP G+R + F + ++ +V Sbjct 392 ALGEEPE-KGPDVTQVLVRFPNGERKGRMFKSETKIQTLYDYV 433 > At1g66670 Length=309 Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 0/42 (0%) Query 79 TALSSFSLAQTLPRRRFCWTNGRIFLFVPPNTEGEDITEITL 120 ++ +F LA +R+C N ++ + P T G TE+++ Sbjct 163 ASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSI 204 > CE02183 Length=523 Score = 28.1 bits (61), Expect = 3.8, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 11/69 (15%) Query 4 PELQEAIRLSMECYRKEVEAP---GEEPTGEGEEIKLINLR--------FPTGKRITKKF 52 P + ++ +M CYR+E+ P E E I++IN F + +KF Sbjct 391 PTILAGVKPNMTCYREEIFGPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARKF 450 Query 53 TKDVNTTQI 61 T +V+ QI Sbjct 451 TNEVDVGQI 459 > At4g14250_1 Length=370 Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 16/97 (16%) Query 4 PELQEAIRLS-------MECYRKEVEAPGEEPTGEGEE--IKLINLRFPTGKRITKKFTK 54 PE ++ + LS + C E EEP + + + I +RFP G+R +KF K Sbjct 263 PEFEDIMTLSEHEEETCLSCDLLEFPVLTEEPKADCDRSVVCSICVRFPDGRRKQRKFLK 322 Query 55 DVNTTQIFKWVIYESHNNEGISPLTALSSFSLAQTLP 91 Q+ W SH E + F L Q +P Sbjct 323 S-EPIQLL-WSFCYSHMEE-----SEKKEFKLVQAIP 352 > Hs20545197 Length=832 Score = 27.7 bits (60), Expect = 5.0, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Query 1 NEDPELQEAIRLSMECYRKEVEAPGEEPTGEGEEIK----LINLRFPT 44 + DP Q R E+E PGEEP G E + L+ +R PT Sbjct 201 DPDPRSQTQCAKQRGNNRLELELPGEEPVGSTEAVDGAQCLVPIREPT 248 > ECU10g0410 Length=208 Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust. Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 0/19 (0%) Query 2 EDPELQEAIRLSMECYRKE 20 +DPEL EAIRLS+E +K+ Sbjct 188 DDPELAEAIRLSLEEQKKQ 206 > YDL091c Length=455 Score = 27.3 bits (59), Expect = 6.3, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 13/89 (14%) Query 17 YRKEVEAPGEEPTGEGEEIKLINLRFPTGKRITKKFTKDVNTTQIFKWVIYESH---NNE 73 +RK P EP+ + + K + +R G+R+ +KF + T +I+ +V + H N+E Sbjct 345 WRKSQLKP--EPSSDKDASK-VAIRLENGQRLVRKFDASLPTEEIYAFVELQLHDMLNSE 401 Query 74 GIS-PLTALS------SFSLAQTLPRRRF 95 + P+ + SF L +PRR Sbjct 402 NDTLPVYQPANYQHQYSFKLITPVPRREL 430 > Hs14724607 Length=508 Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 8/75 (10%) Query 21 VEAPGEEPTGEGEEIKLINLRFPTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPLTA 80 +E E E + I R P G T +F D + ++ N G Sbjct 305 MEVKRESYARERSTVARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYG------ 358 Query 81 LSSFSLAQTLPRRRF 95 +FSLA PRR F Sbjct 359 --NFSLATMFPRREF 371 > CE10292 Length=1372 Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 11/83 (13%) Query 22 EAPGEEPTGEGEEIKLINLRF--PTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPLT 79 EA G + G I LIN + G+RI KKF + +N Q+F + P Sbjct 233 EAYGGDSPGGSPLIVLINAKSGDSQGQRIIKKFRRILNPIQVFDII--------ATGPDF 284 Query 80 ALSSFSLAQTLPRRRFCWTNGRI 102 AL+ FS ++ R C +G + Sbjct 285 ALTFFSHLESF-RVLVCGGDGTV 306 > CE10294 Length=1321 Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 11/83 (13%) Query 22 EAPGEEPTGEGEEIKLINLRF--PTGKRITKKFTKDVNTTQIFKWVIYESHNNEGISPLT 79 EA G + G I LIN + G+RI KKF + +N Q+F + P Sbjct 233 EAYGGDSPGGSPLIVLINAKSGDSQGQRIIKKFRRILNPIQVFDII--------ATGPDF 284 Query 80 ALSSFSLAQTLPRRRFCWTNGRI 102 AL+ FS ++ R C +G + Sbjct 285 ALTFFSHLESF-RVLVCGGDGTV 306 Lambda K H 0.316 0.137 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1180352192 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40