bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_1488_orf2 Length=94 Score E Sequences producing significant alignments: (Bits) Value 7295455 60.8 5e-10 Hs22041509 58.2 4e-09 7299109 57.0 7e-09 Hs11321583_2 57.0 8e-09 Hs22055770 54.7 4e-08 YGR244c 54.3 5e-08 At2g20420 52.4 2e-07 CE03351 48.5 3e-06 CE04242 46.2 1e-05 SPCC1620.08 45.8 2e-05 > 7295455 Length=416 Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query 32 VVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKGRKVRR 91 VVKAQILAGGR G F +NG+KGGVH N V S+ MI LITKQT K G V + Sbjct 66 VVKAQILAGGRGKGTF-DNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNK 124 Query 92 LLI 94 +++ Sbjct 125 VMV 127 > Hs22041509 Length=432 Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query 31 LVVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKGRKVR 90 +V+KAQILAGGR G F +G KGGVH +P +V +A MI L TKQT K+G KV Sbjct 80 IVLKAQILAGGRGKGVFN-SGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVN 138 Query 91 RLLI 94 ++++ Sbjct 139 KVMV 142 > 7299109 Length=465 Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query 27 QENALVVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKG 86 + + LV+KAQ+LAGGR G FK NG KGGV +P+ +++ MI++ L+TKQT G Sbjct 76 KTDNLVLKAQVLAGGRGKGTFK-NGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAAG 134 Query 87 RKVRRLLI 94 R +++++ Sbjct 135 RICKKVMV 142 > Hs11321583_2 Length=385 Score = 57.0 bits (136), Expect = 8e-09, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query 31 LVVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKGRKVR 90 +V+KAQ+LAGGR G F E+G KGGV +P+ +V++ MI K L TKQT +KGR Sbjct 17 VVIKAQVLAGGRGKGTF-ESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICN 75 Query 91 RLLI 94 ++L+ Sbjct 76 QVLV 79 > Hs22055770 Length=383 Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query 31 LVVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKGRKVR 90 +V+KAQILAGGR G F +G K GVH +P +V +A MI L TKQT K+G KV Sbjct 32 IVLKAQILAGGRGKGVFN-SGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVN 90 Query 91 RLLI 94 ++++ Sbjct 91 KVMV 94 > YGR244c Length=427 Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query 29 NALVVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKGRK 88 N LV+KAQ L GGR G F + GYK GVH +P+ VA M+N LITKQT G+ Sbjct 71 NKLVIKAQALTGGRGKGHF-DTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKP 129 Query 89 VRRLLI 94 V + I Sbjct 130 VSAVYI 135 > At2g20420 Length=421 Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 2/67 (2%) Query 28 ENALVVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKGR 87 E+ LVVK+QILAGGR LG FK +G KGGVH + +A M+ + L+TKQT +G+ Sbjct 68 ESELVVKSQILAGGRGLGTFK-SGLKGGVH-IVKRDEAEEIAGKMLGQVLVTKQTGPQGK 125 Query 88 KVRRLLI 94 V ++ + Sbjct 126 VVSKVYL 132 > CE03351 Length=435 Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query 32 VVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKGRKVRR 91 VVKAQ+LAGGR G F +G +GGV P V A MI LITKQT +G+K Sbjct 67 VVKAQVLAGGRGKGRFS-SGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEE 125 Query 92 LLI 94 +++ Sbjct 126 VMV 128 > CE04242 Length=415 Score = 46.2 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 3/69 (4%) Query 28 ENALVVKAQILAGGRSLGFFKENGYKG--GVHACINPKLVFSVANNMINKTLITKQTTKK 85 ++ VVKAQILAGGR G F NG KG GV + MI K L+TKQTT + Sbjct 59 DHEYVVKAQILAGGRGKGKFI-NGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSE 117 Query 86 GRKVRRLLI 94 G +V +++I Sbjct 118 GVRVDKVMI 126 > SPCC1620.08 Length=433 Score = 45.8 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query 31 LVVKAQILAGGRSLGFFKENGYKGGVHACINPKLVFSVANNMINKTLITKQTTKKGR 87 LVVKAQ+LAGGR G F ++G +GGV + A MI LIT+QT G+ Sbjct 65 LVVKAQVLAGGRGKGQF-DSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGK 120 Lambda K H 0.316 0.129 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1164659894 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40