bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_1075_orf1 Length=118 Score E Sequences producing significant alignments: (Bits) Value YCL004w 37.4 0.006 CE25321 37.0 0.008 7300436 35.8 0.021 SPBP18G5.02 29.6 1.6 7300080 28.9 2.3 7293573 27.7 5.4 YER177w 27.3 7.1 SPAC1834.07 27.3 7.7 > YCL004w Length=521 Score = 37.4 bits (85), Expect = 0.006, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Query 43 MSLLGSSNLSVRSSVRDLELLCLLRTRDEQLVKQLQQEVYDVLLPFCVPAAAHVFSS 99 ++++GSSN + R+ DLE L+ TRDE+L K+++ E+ D LL + P F S Sbjct 445 ITVIGSSNYTRRAYSLDLESNALIITRDEELRKKMKAEL-DNLLQYTKPVTLEDFQS 500 > CE25321 Length=318 Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%) Query 36 SRKIWAA-----MSLLGSSNLSVRSSVRDLELLCLLRTRDEQLVKQLQQE 80 ++ +WA M+L+GSSN RS RDLE ++ TR+ L+ +L+ E Sbjct 231 AKGLWAEHNNQLMTLIGSSNYGYRSVHRDLEAQVMVVTRNPTLIDRLKDE 280 > 7300436 Length=493 Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query 43 MSLLGSSNLSVRSSVRDLELLCLLRTRDEQLVKQLQQEVYDVLLPFCVPAAAHVFSSRFP 102 ++L+GSSN RS RDLE L T ++ L ++LQ E D L A + P Sbjct 421 LTLIGSSNFGERSVNRDLETQVCLVTANKDLSQRLQAEA-DRLYDLSQTAEREIVQRPVP 479 Query 103 LWLQ 106 W+Q Sbjct 480 RWVQ 483 > SPBP18G5.02 Length=534 Score = 29.6 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 0/39 (0%) Query 43 MSLLGSSNLSVRSSVRDLELLCLLRTRDEQLVKQLQQEV 81 ++ +GSSN + RS DLE ++ T++E+L ++ E+ Sbjct 463 LTTIGSSNYTSRSQQLDLESTLVVMTQNEKLKRKFSTEI 501 > 7300080 Length=472 Score = 28.9 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 9/53 (16%) Query 14 LLHNSLTRNPASNSSCSSNC------VCSRKIWAAMSLLGSSNLSVRSSVRDL 60 L HNSL R P + SS S +C CS ++ SL+ SSN S + DL Sbjct 367 LCHNSLPRQPPAKSSWSPDCEDRLTLECS---ISSPSLMRSSNDETCSELADL 416 > 7293573 Length=563 Score = 27.7 bits (60), Expect = 5.4, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 0/42 (0%) Query 77 LQQEVYDVLLPFCVPAAAHVFSSRFPLWLQFAFNSLGLRSLL 118 +Q + +++P C H F +W+ FA +GL S+L Sbjct 139 VQGFAFGLMVPTCYTTFNHYFVKNRVMWMSFAQTLIGLGSML 180 > YER177w Length=267 Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust. Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Query 32 NCVCSRKI-WAAMSLLGSSNLSVRSSVRDLELLCLLRTRDEQLVKQLQQEVYDVLLPFCV 90 N + +R+ W +S + S S +EL+C R++ E + ++ ++ VL + Sbjct 52 NVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETELTKISDDILSVLDSHLI 111 Query 91 PAAAHVFSSRFPLWLQFAFN 110 P+A S F ++ ++ Sbjct 112 PSATTGESKVFYYKMKGDYH 131 > SPAC1834.07 Length=554 Score = 27.3 bits (59), Expect = 7.7, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Query 35 CSRKIWAAMSLLGSSNLSVRSSVRDLELLCLLRT-------RDEQLVKQLQQEVYD 83 C +W+ L SNL+ +S++++ E++ RT RDE V + + +D Sbjct 369 CHSNVWSGEHSLTLSNLAEKSNLKEAEIIQGNRTIQESNNDRDESTVASIHRHNFD 424 Lambda K H 0.324 0.132 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1167969826 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40