bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_0851_orf1 Length=97 Score E Sequences producing significant alignments: (Bits) Value 7292708 34.7 0.051 At2g41790 30.8 0.70 CE26367 28.5 3.1 Hs4505453 28.1 4.2 7299678 28.1 4.2 At4g24170 27.7 6.1 At2g38040 27.3 6.5 > 7292708 Length=1077 Score = 34.7 bits (78), Expect = 0.051, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 17/104 (16%) Query 8 IFWSAPANLETQLVEL-----------QCQPSSLLQYLLEHPVKGGLLETLKEKEYISK- 55 +F+ P ET+L EL + +P L YLL + +G L L+ + + + Sbjct 311 VFFVKPVENETKL-ELTWVLPNVRQYYRSKPDQFLSYLLGYEGRGSLCAYLRRRLWALQL 369 Query 56 ----GEAFTDMTSRSSILGLVLDLTEKGESNVTELLGSVHAHIQ 95 E DM S S+ + + LT++G N+ E+L + A+++ Sbjct 370 IAGIDENGFDMNSMYSLFNICIYLTDEGFKNLDEVLAATFAYVK 413 > At2g41790 Length=970 Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%) Query 27 PSSLLQYLLEHPVKGGLLETLKEKEY---ISKGEAFTDMTSRSSILGLVLDLTEKGESNV 83 PS L +L+ H +G L LK + +S GE + T S + +DLT+ G ++ Sbjct 291 PSQYLGHLIGHEGEGSLFHALKTLGWATGLSAGEG--EWTLDYSFFKVSIDLTDAGHEHM 348 Query 84 TELLGSVHAHIQ 95 E+LG + +IQ Sbjct 349 QEILGLLFNYIQ 360 > CE26367 Length=1109 Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust. Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 0/53 (0%) Query 24 QCQPSSLLQYLLEHPVKGGLLETLKEKEYISKGEAFTDMTSRSSILGLVLDLT 76 QC+ + L+ +++ + L ++ I+ G A +DM ++SS +G V D+ Sbjct 371 QCRNTHLISEMMDALLVEKLAPDVEITSLIANGTAESDMATKSSFVGTVADVN 423 > Hs4505453 Length=1219 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Query 6 LFIFWSAPANLETQLVELQCQPSSLLQYLLEHPVKGGLLETLKEKEYI-----SKGEAFT 60 L I W+ P Q + +P + +L+ H KG +L L++K + GE Sbjct 508 LTITWALPP----QQQHYRVKPLHYISWLVGHEGKGSILSFLRKKCWALALFGGNGETGF 563 Query 61 DMTSRSSILGLVLDLTEKGESNVTELLGSVHAHIQ 95 + S S+ + + LT++G + E+ +V +++ Sbjct 564 EQNSTYSVFSISITLTDEGYEHFYEVAYTVFLYLK 598 > 7299678 Length=530 Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%) Query 6 LFIFWSAPANLETQLVELQCQPSSLLQYLLEHPVKGGLLETLKEKEYISKGEAFTD---- 61 L +F P N + + + SLL L E P K +LE L +Y K +F+ Sbjct 394 LPVFGDQPGNADVMVKQGFGLTQSLLS-LEEQPFKEAILEILSNPQYFDKVASFSSLYRD 452 Query 62 --MTSRSSIL 69 M++R S++ Sbjct 453 RPMSARESVI 462 > At4g24170 Length=1263 Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust. Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 7/88 (7%) Query 4 RRLFIFWSAPANLETQLVELQCQPSSLLQYLLEHPVKGGLLETLKEKEYISKGEAFTDMT 63 R+ + +SA + +L C+ SS LL+ P +G ++E L+E E D + Sbjct 121 RKFTLKFSAMEIYNEAVRDLLCEDSSTPLRLLDDPERGTVVEKLRE-------ETLRDRS 173 Query 64 SRSSILGLVLDLTEKGESNVTELLGSVH 91 +L + + GE+++ E+ H Sbjct 174 HLEELLSICETQRKIGETSLNEISSRSH 201 > At2g38040 Length=796 Score = 27.3 bits (59), Expect = 6.5, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 0/53 (0%) Query 43 LLETLKEKEYISKGEAFTDMTSRSSILGLVLDLTEKGESNVTELLGSVHAHIQ 95 L + LKEK +KGE +M +GL LD ++ + + E + + + ++Q Sbjct 624 LPDALKEKVLKTKGEVEAEMAGVLKSMGLELDAVKQNQKDTAEQIYAANENLQ 676 Lambda K H 0.316 0.133 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1198045380 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40