bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_0598_orf1
Length=88
Score E
Sequences producing significant alignments: (Bits) Value
SPBC19G7.03c 65.9 2e-11
SPAC19B12.04 65.9 2e-11
7300667_2 62.4 2e-10
Hs4503659_2 60.8 6e-10
YOR182c 57.8 5e-09
YLR287c-a 57.8 5e-09
At5g56670 56.2 1e-08
At4g29390 56.2 1e-08
At2g19750 54.3 6e-08
CE06878_2 47.8 4e-06
CE05322 30.4 0.80
At5g67030 30.0 1.1
ECU10g1575 28.9 2.3
YPR120c 26.9 8.1
At4g21070_1 26.9 9.0
> SPBC19G7.03c
Length=61
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 0/49 (0%)
Query 30 MGKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRFTTTLN 78
MGKVHGSLARAGKVK+QTPKV+KQ+K K GRA KR LY RRF N
Sbjct 1 MGKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNVTN 49
> SPAC19B12.04
Length=61
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 0/49 (0%)
Query 30 MGKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRFTTTLN 78
MGKVHGSLARAGKVK+QTPKV+KQ+K K GRA KR LY RRF N
Sbjct 1 MGKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNVTN 49
> 7300667_2
Length=62
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 3/60 (5%)
Query 31 GKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRFTT---TLNRRRGPNAQS 87
GKVHGSLARAGKVK QTPKV+KQ+K+K TGRAK+R YNRRF RRRGPNA S
Sbjct 2 GKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRGPNANS 61
> Hs4503659_2
Length=63
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 3/60 (5%)
Query 31 GKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRFTT---TLNRRRGPNAQS 87
GKVHGSLARAGKV+ QTPKV KQ+K+K TGRAK+R YNRRF T +++GPNA S
Sbjct 4 GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 63
> YOR182c
Length=63
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 6/63 (9%)
Query 30 MGKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRF--TTTLNRRR----GP 83
M KVHGSLARAGKVK+QTPKV+K +K K GRA KR LY RRF T +N +R GP
Sbjct 1 MAKVHGSLARAGKVKSQTPKVEKTEKPKKPKGRAYKRLLYTRRFVNVTLVNGKRRMNPGP 60
Query 84 NAQ 86
+ Q
Sbjct 61 SVQ 63
> YLR287c-a
Length=63
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 6/63 (9%)
Query 30 MGKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRF--TTTLNRRR----GP 83
M KVHGSLARAGKVK+QTPKV+K +K K GRA KR LY RRF T +N +R GP
Sbjct 1 MAKVHGSLARAGKVKSQTPKVEKTEKPKKPKGRAYKRLLYTRRFVNVTLVNGKRRMNPGP 60
Query 84 NAQ 86
+ Q
Sbjct 61 SVQ 63
> At5g56670
Length=62
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Query 30 MGKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRFTTTL---NRRRGPNA 85
MGKVHGSLARAGKV+ QTPKV KQ K+K GRA KR +NRRF T + ++RGPN+
Sbjct 1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNS 59
> At4g29390
Length=62
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Query 30 MGKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRFTTTL---NRRRGPNA 85
MGKVHGSLARAGKV+ QTPKV KQ K+K GRA KR +NRRF T + ++RGPN+
Sbjct 1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNS 59
> At2g19750
Length=68
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 3/58 (5%)
Query 31 GKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRFTTTL---NRRRGPNA 85
GKVHGSLARAGKV+ QTPKV KQ K+K GRA KR +NRRF T + ++RGPN+
Sbjct 8 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNS 65
> CE06878_2
Length=61
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query 31 GKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRRFTTTLN---RRRGPNAQS 87
GKVHGSLARAGKV+ QTPKV KQ K+K GRA +R Y RR+ + ++RGPN+ S
Sbjct 2 GKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYVNVASGPGKKRGPNSNS 61
> CE05322
Length=384
Score = 30.4 bits (67), Expect = 0.80, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query 10 VFGFFRQPANQYYLDSELSKM-GKVHGSLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQL 68
+FG ++ +++ LS G +HGS + VQK+ +P+ A R L
Sbjct 306 IFGTLNSTRHKAFIERLLSNEDGSIHGSHEEIIITQKIEKTVQKETLEQPLEQVADTRPL 365
Query 69 YNRRFTTTLNRRRG 82
RRF+ N + G
Sbjct 366 AERRFSLMPNNQLG 379
> At5g67030
Length=667
Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query 14 FRQPANQYYLD--SELSKMGKVHGSLARAG--KVKNQTPKVQKQQKRKPVTGRAKKRQL 68
F + Q+YLD S K G V G +R VK T V+K++KR+ VT + KK ++
Sbjct 25 FSPVSKQFYLDLSSFSGKPGGVSGFRSRRALLGVKAATALVEKEEKREAVTEKKKKSRV 83
> ECU10g1575
Length=59
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 0/37 (0%)
Query 36 SLARAGKVKNQTPKVQKQQKRKPVTGRAKKRQLYNRR 72
++ +AGKV+NQTPK +K + GR ++R + +R
Sbjct 5 TINKAGKVRNQTPKDPVVEKERKKCGRCRQRLKFEKR 41
> YPR120c
Length=435
Score = 26.9 bits (58), Expect = 8.1, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 19/28 (67%), Gaps = 0/28 (0%)
Query 45 NQTPKVQKQQKRKPVTGRAKKRQLYNRR 72
++ KV++++ +P+ +KRQ+YN R
Sbjct 79 SKAAKVRREENIRPIVSAVQKRQIYNDR 106
> At4g21070_1
Length=600
Score = 26.9 bits (58), Expect = 9.0, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 0/34 (0%)
Query 11 FGFFRQPANQYYLDSELSKMGKVHGSLARAGKVK 44
F +FR+ +Y ++ + G + LARAG+VK
Sbjct 344 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 377
Lambda K H
0.321 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1184307974
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40