bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_0487_orf1 Length=107 Score E Sequences producing significant alignments: (Bits) Value At3g07090 77.8 4e-15 Hs14779199 61.2 4e-10 ECU09g0690 55.8 2e-08 CE28391 42.4 2e-04 7303700 36.6 0.012 Hs7705642 36.6 0.012 At1g27760 30.4 0.72 CE02643 30.0 1.0 At5g47310 29.6 1.5 Hs5453910 29.3 1.6 Hs18589856 29.3 1.8 At4g31980_1 29.3 2.1 CE02162 28.9 2.7 At1g36035 28.5 2.9 At3g48110 28.5 3.2 At2g25190 27.7 5.2 ECU09g1390 27.3 6.4 At1g80690 27.3 7.9 YMR288w 26.9 9.1 At3g02850 26.9 9.8 > At3g07090 Length=265 Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 3/94 (3%) Query 14 RVILRVYDISRGLASRLAPMLLGRPLEGVWHSGIQLGDLEYFYGGGVVRMRPYEIESMYG 73 +V L VYD+S+GLA +L+ LLG+ +EGVWH+GI + EYF+GGG+ + P + YG Sbjct 7 KVTLNVYDLSQGLARQLSQSLLGKVIEGVWHTGIVVYGNEYFFGGGIQHL-PVG-RTPYG 64 Query 74 MSPNKIEELGVTHKTNQEIQTFLTSISPRFTAET 107 +P + ELG++H + +L ISPR+TAE+ Sbjct 65 -TPIRTIELGLSHVPKDVFEMYLEEISPRYTAES 97 > Hs14779199 Length=168 Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 2/85 (2%) Query 15 VILRVYDISRGLASRLAPMLLGRPLEGVWHSGIQLGDLEYFYGGGVVRMRPYEIESMYGM 74 V L VYD+S+GLA RL+P++LG+ LEG+WH+ I + E+F+G G + P ++ G Sbjct 9 VKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSGGISSCP-PGGTLLG- 66 Query 75 SPNKIEELGVTHKTNQEIQTFLTSI 99 P+ + ++G T T + +L+S+ Sbjct 67 PPDSVVDVGSTEVTEEIFLEYLSSL 91 > ECU09g0690 Length=150 Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Query 14 RVILRVYDISRGLASRLAPMLLGRPLEGVWHSGIQLGDLEYFYGGGVVRMRPYEIESMYG 73 VILRVY + + R LG+ +WH+ I++ EYF+ G+++ RP ++YG Sbjct 5 NVILRVYSLGDEVLKRFITSSLGKSEACIWHTSIEVYGTEYFFQNGIMKARPG--STIYG 62 Query 74 MSPNKIEELGVTHKTNQEIQTFLTSISPRF 103 +P KI +LG T + FL SI+ F Sbjct 63 -TPLKIHDLGATDIPEVVFEDFLFSIAEDF 91 > CE28391 Length=334 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%) Query 41 GVWHSGIQLGDLEYFYGGGVVRMRPYEIESMYGMSPNKIEELGVTHKTNQEI 92 G++HSGI++ +EY YGG PY+ ++ SP EELG T K + I Sbjct 52 GIFHSGIEVFGVEYAYGG-----HPYQFSGVFENSPQDAEELGETFKFKESI 98 > 7303700 Length=205 Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 29/102 (28%) Query 9 SSSGTR--VILRVYDI--------SRGLASRLAPMLLGRPLEGVWHSGIQLGDLEYFYGG 58 S+ GTR VIL VYD+ S GL GV+HSG++ E+ YGG Sbjct 31 SNMGTREPVILNVYDMYWINEYTTSIGL--------------GVFHSGVEAFGTEFAYGG 76 Query 59 GVVRMRPYEIESMYGMSPNKIEELGVTHKTNQEIQTFLTSIS 100 P+ ++ +SP +ELG + Q IQ T + Sbjct 77 -----HPFPFTGVFEISPRDHDELGDQFQFRQSIQIGCTDFT 113 > Hs7705642 Length=193 Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Query 41 GVWHSGIQLGDLEYFYGGGVVRMRPYEIESMYGMSPNKIEELGVTHKTNQEI 92 GV+HSGI++ E+ YGG PY ++ +SP ELG T K + + Sbjct 27 GVFHSGIEVYGREFAYGG-----HPYPFSGIFEISPGNASELGETFKFKEAV 73 > At1g27760 Length=459 Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Query 43 WHSGIQLGDLEYFYGGGVVR-MRPYE-IESMYGMSPNKI 79 W+ IQL L++F GGG ++ M+ E + ++ +P KI Sbjct 370 WYQMIQLNYLKHFLGGGFIKHMQENEFLHDVFSFTPKKI 408 > CE02643 Length=328 Score = 30.0 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 12/79 (15%) Query 27 ASRLAPMLLGRPLEGVWHSGIQ-------LGDLEYFYGGGVVRMRPYEIESMYGMSPNKI 79 + R+ PMLLG E W SG + LG+ Y G + IES+ + + Sbjct 169 SKRIPPMLLGGNQESGWRSGTENTPMIVGLGEAAKVYNEGFL-----NIESILRQNRDYF 223 Query 80 EELGVTHKTNQEIQTFLTS 98 EEL + N I F+ S Sbjct 224 EELLLKRLRNSHIIHFIGS 242 > At5g47310 Length=245 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Query 41 GVWHSGIQLGDLEYFYGG------GVVRMRPYEIESMYGMSPNKIEELGVTHKTNQEIQT 94 G++HSGI+ EY YG GV + P S G + LG T + + ++ Sbjct 50 GIFHSGIEAHGFEYGYGAHEYSSSGVFEVEP---RSCPGFIFRRSVLLGTTSMSRSDFRS 106 Query 95 FLTSISPRFTAET 107 F+ +S ++ +T Sbjct 107 FMEKLSRKYHGDT 119 > Hs5453910 Length=756 Score = 29.3 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 0/24 (0%) Query 22 ISRGLASRLAPMLLGRPLEGVWHS 45 ++R L + L PMLL RPL+GV +S Sbjct 401 MARHLHAILGPMLLNRPLDGVTNS 424 > Hs18589856 Length=154 Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Query 41 GVWHSGIQLGDLEYFYGGGVVRMRPYEIESMYGMSPNKIEELGVTHKTNQ 90 GV+HS I++ E+ YGG PY ++ +SP ELG K + Sbjct 27 GVFHSEIEVYGREFAYGG-----HPYPFSGIFEISPGNASELGEPFKFKE 71 > At4g31980_1 Length=266 Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 19/111 (17%) Query 1 HAAAKMANSSSGTRVILRVYDISRGLASRLAPM-LLGRPLE-GVWHSGIQLGDLEYFYGG 58 + + + +S V L VYD L PM + G L G++HSG+++ +EY YG Sbjct 5 NVSVRRKKNSGTVPVYLNVYD--------LTPMNVYGYWLGIGIYHSGLEVHGVEYGYGA 56 Query 59 ------GVVRMRPYEIESMYGMSPNKIEELGVTHKTNQEIQTFLTSISPRF 103 G+ + P + G + K +G T +E+++F+ +S + Sbjct 57 HEKSSSGIFEVEPKKCP---GFTFRKSILVGETEMKAKEVRSFMEKLSEEY 104 > CE02162 Length=380 Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 17/87 (19%) Query 12 GTRVILRVYDISRGLASRLAPMLLGRPLEGVWHSGIQLG---------------DLEYFY 56 G RV +YD+S AS L+ L P E +W + L L+ F Sbjct 38 GRRVQENMYDVSWDQASELSYTYLDTPSEHIWTPIVPLNATTVPVTCGYVKGIMHLKLFR 97 Query 57 GGGVVRMRPYEIESMYGMSPNKIEELG 83 G +R E ES Y ++P + ELG Sbjct 98 CPG-IRQACIEYESQY-LTPKQFTELG 122 > At1g36035 Length=1418 Score = 28.5 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Query 61 VRMRPYE----IESMYGMSPNKIEELGVTHKTNQEIQTFLTSISPRFTA 105 ++M PYE S N+ E LG T+K + ++ L + P+F A Sbjct 135 LKMEPYETIVKFSSKISALANEAEVLGKTYKDQKLVKKLLRCLPPKFPA 183 > At3g48110 Length=1067 Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust. Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 0/33 (0%) Query 42 VWHSGIQLGDLEYFYGGGVVRMRPYEIESMYGM 74 +W G+++ YF G + + P +E YG+ Sbjct 199 IWMDGMEITQFTYFQQAGSLPLSPVSVEITYGL 231 > At2g25190 Length=240 Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 25/112 (22%) Query 3 AAKMANSSSGTRVILRVYDISRGLASRLAPM-----LLGRPLEGVWHSGIQLGDLEYFYG 57 + K S V L VYD L PM LG GV+HSG+++ +EY +G Sbjct 7 SVKRKKQSGSVPVYLNVYD--------LTPMNAYGYWLGL---GVFHSGVEVHGVEYAFG 55 Query 58 G------GVVRMRPYEIESMYGMSPNKIEELGVTHKTNQEIQTFLTSISPRF 103 G+ + P + G + K +G T +E++ F+ ++ + Sbjct 56 AHESSSTGIFEVEPKKCP---GFTFRKSILVGKTDLVAKEVRVFMEKLAEEY 104 > ECU09g1390 Length=426 Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 0/45 (0%) Query 47 IQLGDLEYFYGGGVVRMRPYEIESMYGMSPNKIEELGVTHKTNQE 91 +++ +L+ Y G VV +R + E+ P +I+E+ V KT++E Sbjct 114 VRMRELKDVYEGEVVELRIVDEENPLSSYPKRIKEMFVILKTSKE 158 > At1g80690 Length=231 Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 16/63 (25%) Query 15 VILRVYDIS--RGLASRLAPMLLGRPLEGVWHSGIQLGDLEYFYGG------GVVRMRPY 66 V L VYD++ G A L GV+HSG+++ +EY YG G+ P Sbjct 17 VYLNVYDLTPINGYAYWLG--------LGVYHSGVEVHGIEYAYGAHEYPSTGIFEGEPK 68 Query 67 EIE 69 + E Sbjct 69 QCE 71 > YMR288w Length=971 Score = 26.9 bits (58), Expect = 9.1, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%) Query 28 SRLAPMLLGRPLEGV-WHSGIQLGDLEYFYGGGVVRMRPYEIESMYGMSPNKIEELGVTH 86 +RL P+LL R LE H I+ D + G + + PY + + +P I+E + Sbjct 202 NRLLPILLDRSLEDQERHLMIKTIDRVLYQLGDLTK--PYVHKILVVAAPLLIDEDPMVR 259 Query 87 KTNQEIQTFLTSIS 100 T QEI T L++++ Sbjct 260 STGQEIITNLSTVA 273 > At3g02850 Length=828 Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query 31 APMLLGRPLEGVWHSGIQLGDLEYFYGGGVVRMRPYEIESMYGMSPNKIEELGVTHKTNQ 90 P+ G E + I+L + E+F G V+ + ++ +Y + +EE+G+T ++ Sbjct 401 VPLFRGCSSEFINQIVIRLHE-EFFLPGEVIMEQGSVVDQLYFVCHGVLEEIGITKDGSE 459 Query 91 EIQTFL 96 EI L Sbjct 460 EIVAVL 465 Lambda K H 0.318 0.134 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1164169380 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40