bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_0295_orf2 Length=171 Score E Sequences producing significant alignments: (Bits) Value Hs4505795 79.0 4e-15 SPCC550.04c 77.4 1e-14 7292351 70.1 2e-12 CE23990 64.7 8e-11 At2g34980 50.4 2e-06 YPL076w 35.4 0.053 CE18443 30.4 1.8 > Hs4505795 Length=297 Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 8/156 (5%) Query 10 KWQKILWKKQPHPDCYVDETFLNTLMRNANLTRYMYSDLCKSTVVLTQHLSCILIFLLVY 69 KWQK+L+++QP PD YVD FL L +N + +Y Y + + V+ Q L + +F++++ Sbjct 13 KWQKVLYERQPFPDNYVDRRFLEELRKNIHARKYQYWAVVFESSVVIQQLCSVCVFVVIW 72 Query 70 RMIVKRSLAASTLVIFDVVSLPLGYALRWSLRPAPRAARQV-------LQSAIIVFGVLR 122 + + LA L+ + S +GY L + L ++ L+SA++ Sbjct 73 WYMDEGLLAPHWLLGTGLASSLIGYVL-FDLIDGGEGRKKSGQTRWADLKSALVFITFTY 131 Query 123 ILAPVLQTLTQSFSDDTVISLTSICLLIHIPLNDYS 158 +PVL+TLT+S S DT+ +++ LL H+ DY Sbjct 132 GFSPVLKTLTESVSTDTIYAMSVFMLLGHLIFFDYG 167 > SPCC550.04c Length=324 Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 85/154 (55%), Gaps = 6/154 (3%) Query 11 WQKILWKKQPHPDCYVDETFLNTLMRNANLTRYMYSDLCKSTVVLTQHLSCILIFLLVYR 70 W+K+LW+KQ +PD ++DE+FLN L RN N+ + L ++ ++QHLS ++IF V+ Sbjct 38 WKKVLWRKQDYPDNFIDESFLNGLQRNVNIQVTDFWSLVADSLPVSQHLSSVVIFASVFV 97 Query 71 MIVKRSLAASTLVIFDVVSLPLGYALRWSLRPAPRAAR------QVLQSAIIVFGVLRIL 124 I + L+ + + VS + L + P R +++S I++ L L Sbjct 98 SIYRNQLSCALVGFVSNVSAVAAFILWDFVLRKPCNNRTFPNYMGIVKSCILIVLTLAGL 157 Query 125 APVLQTLTQSFSDDTVISLTSICLLIHIPLNDYS 158 +P+L +LT+S S D+V ++ L ++ ++Y+ Sbjct 158 SPILMSLTKSTSPDSVWAIAVWLFLANVFFHEYT 191 > 7292351 Length=256 Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 12/154 (7%) Query 11 WQKILWKKQPHPDCYVDETFLNTLMRNANLTRYMYSDLCKSTVVLTQHLSCILIFLLVYR 70 W K L+ + +PD Y D +FL L N + Y + + VL +SCI FL++Y+ Sbjct 12 WVKNLYSNREYPDNYTDASFLKDLRTNLHCRIYTFGEAIAGITVLNNQISCITGFLILYQ 71 Query 71 MIVKRSLAASTLVIFDVVSLPLGY------ALRWSLRPAPRAARQVLQSAIIVFGVLRIL 124 +++ S++ +T+++ +GY +L W+L +++FG L Sbjct 72 LMLSDSVSPTTILVPSCGITGIGYLCYRGRSLSWALLGEDSKTL----VTVVLFGYL--F 125 Query 125 APVLQTLTQSFSDDTVISLTSICLLIHIPLNDYS 158 +P+L TLTQ+ S DT+ ++T LL ++ Y Sbjct 126 SPMLHTLTQAISTDTIYTMTFFVLLGNLIFGHYG 159 > CE23990 Length=282 Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%) Query 10 KWQKILWKKQPHPDCYV--DETFLNTLMRNANLTRYMYSDLCKSTVVLTQHLSCILIFLL 67 WQKIL++KQP PD Y D FL L +N ++ Y Y + HL I ++ + Sbjct 6 GWQKILYRKQPFPDNYSGGDAQFLKELRKNVSVVHYDYKSAVFGCMNFLTHLDMITMYFV 65 Query 68 VYRMIVKRSLAASTLVIFDVVSLPLGYALRWS--LRPAPRAARQVLQSAIIVFGVLRILA 125 ++ I+ + + + +++ V SL + L + L P P A++ ++ +F Sbjct 66 LFLNILHSNWSIN--ILYSVFSLTIVLYLFFCKFLIPNPANAKEHARTIFTLFIFAYAFT 123 Query 126 PVLQTLTQSFSDDTVISLTSICLLIHIPLNDYS 158 PV++TLT S S DT+ S + I + +DY Sbjct 124 PVIRTLTTSISTDTIYSTSIITAIFSCFFHDYG 156 > At2g34980 Length=303 Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query 10 KWQKILWKKQ--PHPDCYVDETFLNTLMRNANLTRYMYSDLCKSTVVLTQHLSCILIFLL 67 KW+K+ + + D Y DE+FL ++ NAN+ R + K +V ++Q+L + + +L Sbjct 14 KWRKVAYGGMQIGYDDNYTDESFLEEMVMNANVVRRDLLKVMKDSVSISQYLCIVALVVL 73 Query 68 VYRMIVKRSLAASTLVIFDVVSLPLGYAL----RWSLRPAPRAARQVLQSAIIVFGVLRI 123 V+ ++ SL ++L++ D+ L G+ + + R ++ + G L I Sbjct 74 VWVHTLESSLDENSLLLLDLSLLASGFLILLLTEEKMLSLSLLLRYLVNISFFTTG-LYI 132 Query 124 LAPVLQTLTQSFSDDTVISLTSICLLIHIPLNDYS-YVYRNPETIDEP 170 LAP+ QTLT+S S D++ ++T LL+H+ L+DYS R P + P Sbjct 133 LAPIYQTLTRSISSDSIWAVTVSLLLLHLFLHDYSGSTIRAPGALKTP 180 > YPL076w Length=280 Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 22/171 (12%) Query 11 WQKILWKKQPHPDCYVDETFLNTLMRNANLTRYMYSDLCKSTVVLTQHLSCILIFLLVYR 70 W+++LW KQ +PD Y D +F+ R + SD S Q L F+ Y+ Sbjct 6 WKRLLWLKQEYPDNYTDPSFIELRARQKAESN-QKSDRKLSEAARAQ---IRLDFISFYQ 61 Query 71 MIVKRSLAASTLVI-----FDVVSLPLGYAL------RWSLRPAPRAARQVLQSAIIVFG 119 I+ S T FD + + + R + P + V S II F Sbjct 62 TILNTSFIYITFTYIYYYGFDPIPPTIFLSFITLIISRTKVDPLLSSFMDVKSSLIITFA 121 Query 120 VLRILAPVLQTLTQSFSDDTVISLTSICLLIHIPLNDYSYVYRNPETIDEP 170 +L L+PVL++L+++ + D++ +L+ L +I +V + ++ D+P Sbjct 122 MLT-LSPVLKSLSKTTASDSIWTLSFWLTLWYI------FVISSTKSKDKP 165 > CE18443 Length=435 Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 13/87 (14%) Query 8 FGKWQKILWKKQPHPDCYVDETFLNTLMRNANLTRYMYSDLCKSTVVLTQHLSCILIFLL 67 +G ++KIL ++++ F L RN N+ Y Y DL ++ L +C+ Sbjct 16 YGSYKKIL---------FLEKNFAK-LQRNFNVVFYTYCDLYQAVCYLAYVTTCLFSPSF 65 Query 68 VYRMIVKRSLAASTLVIFDVVSLPLGY 94 +Y K +L S++ S PLG+ Sbjct 66 LYATSAKTTLLISSICF---TSFPLGF 89 Lambda K H 0.327 0.138 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2526689620 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40