bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_0116_orf1
Length=78
Score E
Sequences producing significant alignments: (Bits) Value
At1g77470 45.1 3e-05
7297692 37.4 0.007
CE29044 37.0 0.010
YNL290w 34.3 0.063
Hs7661832 29.6 1.4
Hs21536371_1 29.3 2.0
7297150 29.3 2.1
HsM6005894_1 29.3 2.1
At3g09040 27.3 7.7
> At1g77470
Length=369
Score = 45.1 bits (105), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 0/75 (0%)
Query 2 PSEVKSIMQVLLEKDLRTCSLEFHGLVTRRGYSVRDWVGALHCQMQNMKLPVPVALTLVT 61
P +++ I LL K C + + TR+G ++ D V + + +K+P V + L+
Sbjct 272 PKDIEQISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLIN 331
Query 62 RLADIEERLALGSGD 76
LADIE RL+ G D
Sbjct 332 DLADIEYRLSFGCND 346
> 7297692
Length=297
Score = 37.4 bits (85), Expect = 0.007, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 0/43 (0%)
Query 31 RGYSVRDWVGALHCQMQNMKLPVPVALTLVTRLADIEERLALG 73
RG ++ D + LH + ++LP+ V L+ +LA IEERLA G
Sbjct 230 RGLALEDIITELHLFVMRLELPMSVMNKLIVKLAQIEERLAKG 272
> CE29044
Length=388
Score = 37.0 bits (84), Expect = 0.010, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 0/75 (0%)
Query 2 PSEVKSIMQVLLEKDLRTCSLEFHGLVTRRGYSVRDWVGALHCQMQNMKLPVPVALTLVT 61
P E+K +++ LL + C + GY+++D + LH + + +P ++T
Sbjct 282 PKEMKEVVKTLLNDPSKKCMNTIQTKLFENGYALQDVITHLHDFVFTLDIPDEAMSAIIT 341
Query 62 RLADIEERLALGSGD 76
L ++EE L+ G +
Sbjct 342 GLGEVEENLSTGCSN 356
> YNL290w
Length=340
Score = 34.3 bits (77), Expect = 0.063, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query 1 QPSEVKSIMQVLLEKDLRTCSLEFHGLVTRRGYSVRDWVGALHCQMQNMKLP-VPVALTL 59
+PS++K++++ +LE D T + + + +G ++ D + + +++ +L + L
Sbjct 240 RPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHL 299
Query 60 VTRLADIEERLALGSGDYV 78
+T+LADIE ++ G D +
Sbjct 300 LTKLADIEYSISKGGNDQI 318
> Hs7661832
Length=194
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query 21 SLEFHGLVTRRGYSVRDWVGALHCQMQNMKLPVPV 55
S+E H ++++RG+SVR + H +KLP P
Sbjct 19 SMEAHNILSKRGFSVRSFGTGTH-----VKLPGPA 48
> Hs21536371_1
Length=1436
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 31 RGYSVRDWVGALHCQMQNMKLPVPVALTLVTRLADIEER 69
R + D + AL Q++N LP P +TL+ R+ E+
Sbjct 565 RFLNAHDAIDALEAQLRNQALPFPSNITLMRRILTRNEK 603
> 7297150
Length=425
Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query 6 KSIMQVLLEKD--LRTCSLEFHGLVTRRGYSVRD------WVGALHCQMQNMKLPVPVAL 57
++ QVLLE D LR + GL+ R G + + W+ LH + N+ VP+
Sbjct 65 QTTAQVLLETDALLRQRFVYGRGLL-RMGRIIEELDLLAVWICHLHIHLPNLPEGVPLPY 123
Query 58 TLVTRLAD 65
T +T L D
Sbjct 124 TFITMLVD 131
> HsM6005894_1
Length=1436
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 31 RGYSVRDWVGALHCQMQNMKLPVPVALTLVTRLADIEER 69
R + D + AL Q++N LP P +TL+ R+ E+
Sbjct 565 RFLNAHDAIDALEAQLRNQALPFPSNITLMRRILTRNEK 603
> At3g09040
Length=1028
Score = 27.3 bits (59), Expect = 7.7, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query 2 PSEVK--SIMQVLLEKDLRTCSLEFHGLVTRRGYS 34
PSE+ +I++ + + T +FHG +T+RG+S
Sbjct 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661
Lambda K H
0.323 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1171925608
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40