bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_3419_orf1 Length=125 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_1060 132 3e-30 > 5807.cgd2_1060 Length=718 Score = 132 bits (332), Expect = 3e-30, Method: Composition-based stats. Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 5/111 (4%) Query 1 EIPADLQAIMEEVDSDKSGHIDYTEFIAATMDRKLYMKEDVCWAAFRVFDLDGNGKISQD 60 E+P+DL AI+ ++DSD SG IDYTEFIAAT+D K Y KE VCWAAF+VFD DGNGKI+ + Sbjct 605 ELPSDLLAILNDIDSDGSGSIDYTEFIAATLDSKQYSKEQVCWAAFKVFDQDGNGKITAN 664 Query 61 ELRQVLGMPNVQGAVG-----QETISALLKEVDLNGDGEIDFEEFMHMMRK 106 EL V + QG+ G + ++KEVD++GDGEIDF+EF+ M R+ Sbjct 665 ELLNVFSYNSEQGSAGINDKALSDVKNMIKEVDVDGDGEIDFQEFLEMFRR 715 Lambda K H 0.317 0.136 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22670743557 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40