bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_3316_orf1
Length=130
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  338963.Pcar_0054                                                    81.3    8e-15


> 338963.Pcar_0054
Length=271

 Score = 81.3 bits (199),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query  2    IRSFVGLSDCPRRRSLMFAASHGFDIDAAGFGIHLRHQVGEASVSALRAAVAALLSEVGP  61
            IR+ VG+        +++A SHGFDI  +G G HL  + G   + AL  A  AL  ++  
Sbjct  82   IRNLVGIE------GILYAGSHGFDI--SGPGGHLELEQGIDYLPALDRAETALTKQLAE  133

Query  62   LKGLYVEDNYFSVSIHYRHC-PEYKSLLEEKVDKILINYPSLKKCFGLELFDIRIKTQWD  120
            + G  +E   F++++H+R   P   S +E  VD IL   P L+K  G  +F++R    WD
Sbjct  134  VAGTQIERKRFAIAVHFRRADPADVSQIETIVDTILEKNPGLRKTGGKMIFELRPDIDWD  193

Query  121  KGYAIHWIL  129
            KG A+ WIL
Sbjct  194  KGKALRWIL  202



Lambda     K      H
   0.326    0.141    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 23020010250


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40