bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_3298_orf1
Length=136
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT5G42390.1                                                    60.1    2e-08


> 3702.AT5G42390.1
Length=1265

 Score = 60.1 bits (144),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 0/80 (0%)

Query  17    QLDGAKQQVLSRHLHDRKYARYWLDLLGGLQLADVPRKTPSYFSELERVVKSITMQDIHL  76
             +LD AK+ +L RH  + K   YWL+LL  LQ + VPRK  S   EL  + ++ +++DI+L
Sbjct  1148  ELDRAKRTLLMRHEAELKSNAYWLNLLAHLQASSVPRKELSCIKELVSLYEAASIEDIYL  1207

Query  77    LLRSLGLRRESMWEAIGVSG  96
                 L +  +S++  IG++G
Sbjct  1208  AYNQLRVDEDSLYSCIGIAG  1227



Lambda     K      H
   0.318    0.134    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22513421946


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40