bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_3084_orf2
Length=158
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0264                                                       140    1e-32


> 5833.PF11_0264
Length=1531

 Score =  140 bits (353),  Expect = 1e-32, Method: Composition-based stats.
 Identities = 64/158 (40%), Positives = 101/158 (63%), Gaps = 2/158 (1%)

Query  1     MRTKKWLDAVSTVCTAAGVPVAWKVPAVGLLCEQPYRSLQQQQIRSALQRHTLHVSGDSA  60
             M  KKW + +S V     +P+ W  P +GL CEQPYR   +  + + LQ  ++ +S  ++
Sbjct  1361  MIIKKWFNNLSKVTNELNIPITWISP-IGLPCEQPYRLGNRILVNTPLQSISV-ISYKNS  1418

Query  61    PVSRSKQRLGFPPNFIHSLDAAHMMLTALDCIGTRHIDMAAVHDSYWAHAGCIDTLATAL  120
              + ++KQRLGFPPNF+HSLDA+H+M+TA   +   +   AAVHDSYWAHA  +D +   +
Sbjct  1419  QLHKNKQRLGFPPNFVHSLDASHLMMTAEKMVIQNNFSFAAVHDSYWAHACNVDIMNQFI  1478

Query  121   RQQFVALYQHNPLQSLYDSVKLRLPQQAAKLPPPPAKG  158
             R+ F+ LY    L+++Y++ ++RL + A K+P  P +G
Sbjct  1479  RESFITLYNEPILENIYNNFRIRLGKFATKIPSSPEQG  1516



Lambda     K      H
   0.322    0.132    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 25621323489


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40