bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2977_orf1
Length=87
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFF1360w                                                       86.7    2e-16


> 5833.PFF1360w
Length=173

 Score = 86.7 bits (213),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 1/87 (1%)

Query  1    HGHNYSAAAKLFGQLNLHDGYVIDFSQAKTALRDVCKTLNEHLIVPMRSDVLEITQEGSS  60
            HGHNY+ + K+ G +   DGYVIDFS  K  ++ VC  L+ H I+P+ SDVL+     ++
Sbjct  41   HGHNYNVSLKVRGYVR-DDGYVIDFSILKEKVKKVCNKLDHHFILPIYSDVLKFENVKNN  99

Query  61   IRMRCEDGAEFLIPRQDCLCLPIVHST  87
            I++ CED +E+  P +DC+ LPI HS+
Sbjct  100  IKIICEDNSEYSFPERDCIKLPIKHSS  126



Lambda     K      H
   0.324    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22371284777


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40