bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2749_orf3 Length=171 Score E Sequences producing significant alignments: (Bits) Value 8090.ENSORLP00000005469 64.3 2e-09 > 8090.ENSORLP00000005469 Length=1431 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 74/170 (43%), Gaps = 31/170 (18%) Query 1 YSGLNCE------TFESNCCESDNDCNSPNGVCNS-SNVCECAPEFPAPNCKDLCS---- 49 ++G CE TF NC C+ N +C+ S C CAP F C+ +C+ Sbjct 1079 FTGSGCEKTCLPGTFGPNC-NQVCRCSEKNQLCHPVSGSCYCAPGFHGLKCEHVCAEGRY 1137 Query 50 ------DVHCSNDGKCDPKTGQCECPPGWGGIECTVQKPCGEGG------KICSGNTTCD 97 D C N GKCDP TG CECP G+ G C P G G +C T D Sbjct 1138 GPDCKQDCRCDNGGKCDPFTGACECPAGFIGPHCNTTCPAGRYGLHCAQVALCGVGTQSD 1197 Query 98 AATSTCVCKPGYTGEDCTEMSP------ECSELCK-VGGKIIRDSEGECT 140 T CVC PG TG+DC + P +C+ C G + + G CT Sbjct 1198 PVTGRCVCLPGQTGKDCRQGCPAGWFGADCASFCNCSNGGVCDSATGNCT 1247 Lambda K H 0.316 0.135 0.472 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 32237076404 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40