bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_2749_orf3
Length=171
Score E
Sequences producing significant alignments: (Bits) Value
8090.ENSORLP00000005469 64.3 2e-09
> 8090.ENSORLP00000005469
Length=1431
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 74/170 (43%), Gaps = 31/170 (18%)
Query 1 YSGLNCE------TFESNCCESDNDCNSPNGVCNS-SNVCECAPEFPAPNCKDLCS---- 49
++G CE TF NC C+ N +C+ S C CAP F C+ +C+
Sbjct 1079 FTGSGCEKTCLPGTFGPNC-NQVCRCSEKNQLCHPVSGSCYCAPGFHGLKCEHVCAEGRY 1137
Query 50 ------DVHCSNDGKCDPKTGQCECPPGWGGIECTVQKPCGEGG------KICSGNTTCD 97
D C N GKCDP TG CECP G+ G C P G G +C T D
Sbjct 1138 GPDCKQDCRCDNGGKCDPFTGACECPAGFIGPHCNTTCPAGRYGLHCAQVALCGVGTQSD 1197
Query 98 AATSTCVCKPGYTGEDCTEMSP------ECSELCK-VGGKIIRDSEGECT 140
T CVC PG TG+DC + P +C+ C G + + G CT
Sbjct 1198 PVTGRCVCLPGQTGKDCRQGCPAGWFGADCASFCNCSNGGVCDSATGNCT 1247
Lambda K H
0.316 0.135 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 32237076404
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40