bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_2688_orf1
Length=50
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0192                                                      90.1    2e-17


> 5833.PF11_0192
Length=608

 Score = 90.1 bits (222),  Expect = 2e-17, Method: Composition-based stats.
 Identities = 36/49 (73%), Positives = 44/49 (89%), Gaps = 0/49 (0%)

Query  1    ELQRHALFCECRHPPGNEIYRDDRVSMFEADGTYFRVYCENLCFLSKLF  49
            EL+RH   CE RHPPGNEIYR++++S+FE DG+YFR+YCENLCFLSKLF
Sbjct  376  ELKRHIEKCEIRHPPGNEIYREEKISIFEIDGSYFRIYCENLCFLSKLF  424



Lambda     K      H
   0.331    0.145    0.487 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 23175133371


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40