bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_2675_orf1
Length=142
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI1195c 85.1 5e-16
> 5833.PFI1195c
Length=390
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Query 1 DQIHTDLEKAFAFAASKFRLSHDDIVIIAGAIGGRFDHSITAVSFLYKVHNASAETLPPK 60
+Q +TDL+K K + +D +++ GA G RFD + +S LYK + +T+
Sbjct 246 NQENTDLDKCIE--KIKPYIYENDKILVLGATGNRFDQTCANISSLYK----NVQTIN-N 298
Query 61 VILLGECNACLLLPEGDNEVLLSDGVFSEACGLLPMAGEVRNVTTEGLKWNVKGEPLRVG 120
+ L+GE N LL +G++ + ++ F + C LLP+ G+ + V TEGLK+N+ E L
Sbjct 299 IYLIGENNFIFLLKKGNHVIQINLNAFQKGCALLPIGGKCK-VKTEGLKYNLNYEYLSFD 357
Query 121 GLISSSNIRIKVRIKIATSDPL 142
LISSSN I+ IKI+ PL
Sbjct 358 SLISSSNEIIQNEIKISNDTPL 379
Lambda K H
0.320 0.138 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22741008115
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40