bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2608_orf1 Length=175 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0137 114 1e-24 > 5833.PF14_0137 Length=381 Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 102/174 (58%), Gaps = 3/174 (1%) Query 2 RQPNH--FETIGVPPNAPPRVVSSAYRKLSLMYHPDKNPSMEAKEMFAKIREAHEVISGE 59 R+PN +E + + A + ++RK+S +YHPDKN ++ + F KIREA+EV+S + Sbjct 50 RKPNQNLYEVLNLNAYASKTDIQQSFRKMSRIYHPDKNKEPDSLDRFNKIREAYEVLSND 109 Query 60 RRRDNFIRFGDFSFEGLIGEDQFYEILFVAFFHSFIPFIFGYLHTFGDNSNPTRQFFCSY 119 +++ + RFGDF + I + EI+ +A F I FIFG+L+T+G ++ R C Y Sbjct 110 KKKYTYDRFGDFG-DSEITSFFYVEIIIIAMFQFAISFIFGFLYTYGKDNEKYRILICLY 168 Query 120 LGIVLSSELLLRLDNKLSNLYSFIPYFSSYLAYEKINFLHHWIAIVLNALLLLS 173 + + EL+LR + + SFIP S Y +E+I+ + +++NA+LL+ Sbjct 169 IALNFCMELILRFSPESTVFLSFIPILSHYTPFERIHAFRVLVPLIMNAILLVD 222 Lambda K H 0.327 0.143 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34716851512 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40