bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2595_orf2 Length=163 Score E Sequences producing significant alignments: (Bits) Value 9031.ENSGALP00000003700 244 6e-64 > 9031.ENSGALP00000003700 Length=4073 Score = 244 bits (623), Expect = 6e-64, Method: Composition-based stats. Identities = 113/163 (69%), Positives = 129/163 (79%), Gaps = 0/163 (0%) Query 1 FELLRSPDRLVVTPLTDRCYRTLMTALHFQYGGAPEGPAGTGKTETTKDLAKAAGEPCLV 60 +E L + RLV+TPLTDRCYRTLM AL GGAPEGPAGTGKTETTKDLAKA + C+V Sbjct 1352 YEYLGNCSRLVITPLTDRCYRTLMGALKLNLGGAPEGPAGTGKTETTKDLAKALAKQCVV 1411 Query 61 FNCSEGLDAAAMAALLKGLAASGGWCCFDEFNRLQLDVLSIVALQISAIQQAIRRKAITF 120 FNCS+GLD AMA KGLA SG W CFDEFNR++++VLS+VA QI IQQAI RK TF Sbjct 1412 FNCSDGLDYKAMAKFFKGLAQSGAWSCFDEFNRIEVEVLSVVAQQILTIQQAIIRKVKTF 1471 Query 121 VFEDTDLQLNPTCAINITMNPGYAGRSILPDTLKALFRPCTMM 163 +FE T++ LNPTCA+ ITMNPGYAGR+ LPD LKALFR MM Sbjct 1472 IFEGTEISLNPTCAVFITMNPGYAGRAELPDNLKALFRTVAMM 1514 Lambda K H 0.324 0.137 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 28009217385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40