bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2563_orf2 Length=173 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.234 192 3e-48 > 5833.MAL13P1.234 Length=5987 Score = 192 bits (489), Expect = 3e-48, Method: Composition-based stats. Identities = 108/171 (63%), Positives = 134/171 (78%), Gaps = 2/171 (1%) Query 5 GEFAFNFHFDSEYINRSQRERG-RNTASMRDGFLSAGKNIGEGMWSLTNIVTKPIEGAQR 63 G F N FDSEYINR Q+ER + +M++G +SA KNIGEG+ SL+NIVTKPIEGAQ+ Sbjct 5716 GSFLSNLTFDSEYINRRQKERTFKTNTNMKEGLISAVKNIGEGVLSLSNIVTKPIEGAQK 5775 Query 64 EGVGGFFKGIGKGIVGSLVKPLDKVGQAVSDVTRGIKAEVSRPIGAYKFRNERRRKPRML 123 EG GGFFKGIGKG+ GSLVKPLDKVGQAVSDVTRGIKAEVS+PIG +K++ +R RKPRML Sbjct 5776 EGFGGFFKGIGKGVAGSLVKPLDKVGQAVSDVTRGIKAEVSKPIGGHKYKTKRHRKPRML 5835 Query 124 -RELGEIRPYDETEATLRECLGLAVTRRLQKFVTVLKEEALPPRHFVVLFY 173 E G+++ Y+ EA LRECLGL ++ + K +TV K+E PP H+ +L Y Sbjct 5836 WGEYGKLKEYNINEAELRECLGLKFSKNIMKCLTVHKQENHPPSHYALLLY 5886 Lambda K H 0.322 0.141 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 33476963958 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40