bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2541_orf1 Length=109 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL8P1.104 145 4e-34 > 5833.MAL8P1.104 Length=1774 Score = 145 bits (365), Expect = 4e-34, Method: Composition-based stats. Identities = 70/101 (69%), Positives = 81/101 (80%), Gaps = 0/101 (0%) Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60 NEDVKWISFHGCYDF YL+K+LTC +LP +E AFFEL+ DF PSLYDIK+LL +L L Sbjct 139 NEDVKWISFHGCYDFAYLLKILTCSALPHNEAAFFELLNDFFPSLYDIKYLLLNLNIKQL 198 Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNL 101 S+ SLQK+SE L+VKRIG QHQAGSDSLVTC TF L + Sbjct 199 SRTFSLQKISEILSVKRIGRQHQAGSDSLVTCKTFFKLMEM 239 Lambda K H 0.324 0.139 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22374500883 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40