bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2510_orf1 Length=83 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0087 147 7e-35 > 5833.PF11_0087 Length=366 Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 66/83 (79%), Positives = 76/83 (91%), Gaps = 0/83 (0%) Query 1 AQEYLEARANIIKFTTGSVQLDALLKGGVETGNMTELFGEFRNGKTQLCHTHAVSCQLPV 60 A +Y +AR N+IKFTTGS QLDALLKGG+ETG +TELFGEFR GK+QLCHT A++CQLP+ Sbjct 115 AIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPI 174 Query 61 EQSGGEGKCLWIDTEGTFRPERV 83 EQSGGEGKCLWIDTEGTFRPER+ Sbjct 175 EQSGGEGKCLWIDTEGTFRPERI 197 Lambda K H 0.317 0.135 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22659344793 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40