bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_2374_orf1
Length=114
Score E
Sequences producing significant alignments: (Bits) Value
44689.DDB_0215381 65.1 5e-10
> 44689.DDB_0215381
Length=1298
Score = 65.1 bits (157), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 0/102 (0%)
Query 1 EEAFKPDAVNTATFYLLLAMHMSTFLANYEGAPWSRPLLQNARLGKMLLSGLVLLLVLLL 60
+ F P+ +N+A F + AM ++TF NY+G P+ + L +N L L L L+L
Sbjct 1191 DSPFAPNLLNSAVFLMSNAMQVATFAVNYKGHPFMQSLSENKPLLYALSFVWGLGLLLAT 1250
Query 61 QLLPFLNEILDLVLFHDADFLLQLQLLVAADLLGPWLVAATC 102
+++P LN +L+LV F D+ F L + + DL+G W + C
Sbjct 1251 EIIPPLNSMLELVEFPDSTFRLYMVGAIILDLVGAWFIEKVC 1292
Lambda K H
0.328 0.142 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22778399648
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40