bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2276_orf1 Length=149 Score E Sequences producing significant alignments: (Bits) Value 8364.ENSXETP00000047837 72.4 4e-12 > 8364.ENSXETP00000047837 Length=3890 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 1/122 (0%) Query 29 NENLKHLC-GACADIFESTKNIADCYRVEQRRFFHVTPASFLRFLDGFCYVFMTRASQHH 87 +E +++ C C ST N++D +R E +R+ +VTP S+L + F + + ++ Sbjct 2401 SEEVRNGCIDMCKSFHTSTINLSDRFRSELQRYNYVTPTSYLELISTFKTLLQKKQTEVM 2460 Query 88 HKQQQYELGLQKLHDVSMQVMDMQQQLEKLQPELAKSSMETQQLMQVLTVKQEHAATTMS 147 +++YE+GL+KL S QV MQ +LE LQP+L +S E ++M V+ + A T Sbjct 2461 KMKRRYEVGLEKLESASSQVATMQSELEALQPQLKVASKEVDEMMVVIERESIEVAKTEK 2520 Query 148 LV 149 +V Sbjct 2521 VV 2522 Lambda K H 0.320 0.129 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40