bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2230_orf2 Length=126 Score E Sequences producing significant alignments: (Bits) Value 4896.SPAPB8E5.09 219 2e-56 > 4896.SPAPB8E5.09 Length=456 Score = 219 bits (558), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 97/126 (76%), Positives = 118/126 (93%), Gaps = 0/126 (0%) Query 1 VFIEANTGIVKRVGRSDAFATEFDLEAEDFVPVPKGQVEKRKEVVQTVSLHDLDVANSKP 60 ++IEANTG VKRVGRSDA+ATEFDLEAE++VP+PKG+V KRKE+VQ V+LHDLD+AN++P Sbjct 192 IYIEANTGAVKRVGRSDAYATEFDLEAEEYVPMPKGEVHKRKEIVQDVTLHDLDIANARP 251 Query 61 QGGTDVISMMGAYMKPRKTEITERLREEINKTVNKYIEQGVAQLIPGVLFIDEVHMLDIE 120 QGG D++SMMG MKP+KTEIT++LR EINK VNKYIEQG+A+LIPGVLFIDEVHMLDIE Sbjct 252 QGGQDIMSMMGQLMKPKKTEITDKLRGEINKVVNKYIEQGIAELIPGVLFIDEVHMLDIE 311 Query 121 CFSFLN 126 CF++LN Sbjct 312 CFTYLN 317 Lambda K H 0.318 0.137 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22588795449 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40