bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2191_orf1 Length=157 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_1100 108 5e-23 > 5807.cgd1_1100 Length=1103 Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 21/151 (13%) Query 6 LYAQPSSFGITHNIMQKIAQKKVSVLAVGGFCDSATARGAIRLFSHIQENAPETRSQ--- 62 +YA+ G T ++ + K V+V G+CDSA +RG I+ + + E+A + Q Sbjct 673 IYAE--RLGNTEDVATILGNKGVNVYLTSGYCDSANSRGVIQFYDALVESASKAYEQYLL 730 Query 63 --------------LILGNWSHGGRRSCDPFSGSFSCFEENLYKTILRFLDCQLKNKCWG 108 L+LG W+H GR SC PF S SCFE LY ++RF+DC LK CW Sbjct 731 EAGNMASKEKPIYKLVLGPWTHSGRASCSPFGKSISCFEPALYYDLVRFMDCALKGICWE 790 Query 109 GIQQEEPVHYWQTGTGEWRNAYTFPPPNVEH 139 Q++ +H++Q G +W FPPP+ ++ Sbjct 791 --NQDKNIHFFQVGEEKWYTTDKFPPPDTKY 819 Lambda K H 0.319 0.134 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 24996413160 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40