bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_2118_orf1
Length=148
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0647 76.3 3e-13
> 5833.PF14_0647
Length=1656
Score = 76.3 bits (186), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query 6 TTGLQSPYLMSTKIHEFFTIRPEGISRIITSLDTWETLWRWLPDILRYSTPFLIFSSSHD 65
+T SPYLM+ K+ F+ R S +I S WE +W +P +R PFL ++S D
Sbjct 1467 STKCPSPYLMNVKLKTFYRPRLNDNSTLINSFH-WENIWEKIPSNIRSLDPFLTYASKKD 1525
Query 66 GFTLSALLNRA-LFYSAPFIFLATSDNHDVFGFFSPVSFDAHNKNSACFSYSEAFVFTLS 124
G+ L LL + P I + + + D+ GFF P S + + S AF+FT +
Sbjct 1526 GYNLQMLLEKTERNKKKPMILILKTFDCDLIGFFCPFSLNRDYNFVSTSDKSSAFIFTFN 1585
Query 125 PLPRAFWWTGANGVFLRVRN 144
+ W+G N + +++
Sbjct 1586 SNFNFYKWSGKNNTSVLIKD 1605
Lambda K H
0.327 0.140 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22943761524
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40